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Anton J. Enright
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2020 – today
- 2023
- [j18]Dimitrios Vasileiou, Christos Karapiperis, Ismini Baltsavia, Anastasia Chasapi, Dag G. Ahrén, Paul J. Janssen, Ioannis Iliopoulos, Vasilis J. Promponas, Anton J. Enright, Christos A. Ouzounis:
CGG toolkit: Software components for computational genomics. PLoS Comput. Biol. 19(11) (2023) - 2020
- [c2]Albert S. W. Kang, Anton J. Enright:
Locating patterns in Nanopore currents using time-warped signal representation of consensus nucleotides for demultiplexing and motif detection. EMBC 2020: 82-86
2010 – 2019
- 2016
- [j17]Pedro Furió-Tarí, Sonia Tarazona, Toni Gabaldón, Anton J. Enright, Ana Conesa:
spongeScan: A web for detecting microRNA binding elements in lncRNA sequences. Nucleic Acids Res. 44(Webserver-Issue): W176-W180 (2016) - 2015
- [j16]Dimitrios M. Vitsios, Anton J. Enright:
Chimira: analysis of small RNA sequencing data and microRNA modifications. Bioinform. 31(20): 3365-3367 (2015) - 2014
- [i2]Derek W. Wright, Tim Angus, Anton J. Enright, Tom C. Freeman:
Visualisation of BioPAX Networks using BioLayout Express3D. F1000Research 3: 246 (2014) - 2012
- [i1]Stijn van Dongen, Anton J. Enright:
Metric distances derived from cosine similarity and Pearson and Spearman correlations. CoRR abs/1208.3145 (2012) - 2010
- [j15]Matias Piipari, Thomas A. Down, Harpreet Kaur Saini, Anton J. Enright, Tim J. P. Hubbard:
iMotifs: an integrated sequence motif visualization and analysis environment. Bioinform. 26(6): 843-844 (2010) - [j14]Nenad Bartonicek, Anton J. Enright:
SylArray: a web server for automated detection of miRNA effects from expression data. Bioinform. 26(22): 2900-2901 (2010) - [j13]José Afonso Guerra-Assunção, Anton J. Enright:
MapMi: automated mapping of microRNA loci. BMC Bioinform. 11: 133 (2010)
2000 – 2009
- 2008
- [j12]Sobia Raza, Kevin A. Robertson, Paul A. Lacaze, David Page, Anton J. Enright, Peter Ghazal, Tom C. Freeman:
A logic-based diagram of signalling pathways central to macrophage activation. BMC Syst. Biol. 2: 36 (2008) - [j11]Sam Griffiths-Jones, Harpreet Kaur Saini, Stijn van Dongen, Anton J. Enright:
miRBase: tools for microRNA genomics. Nucleic Acids Res. 36(Database-Issue): 154-158 (2008) - 2007
- [j10]Tom C. Freeman, Leon Goldovsky, Markus Brosch, Stijn van Dongen, Pierre Mazière, Russell J. Grocock, Shiri Freilich, Janet M. Thornton, Anton J. Enright:
Construction, Visualisation, and Clustering of Transcription Networks from Microarray Expression Data. PLoS Comput. Biol. 3(10) (2007) - 2006
- [j9]Sam Griffiths-Jones, Russell J. Grocock, Stijn van Dongen, Alex Bateman, Anton J. Enright:
miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 34(Database-Issue): 140-144 (2006) - 2005
- [j8]Mike Smith, Victor Kunin, Leon Goldovsky, Anton J. Enright, Christos A. Ouzounis:
MagicMatch - cross-referencing sequence identifiers across databases. Bioinform. 21(16): 3429-3430 (2005) - [j7]Leon Goldovsky, Paul J. Janssen, Dag G. Ahrén, Benjamin Audit, Ildefonso Cases, Nikos Darzentas, Anton J. Enright, Núria López-Bigas, José M. Peregrín-Alvarez, Mike Smith, Sophia Tsoka, Victor Kunin, Christos A. Ouzounis:
CoGenT++: an extensive and extensible data environment for computational genomics. Bioinform. 21(19): 3806-3810 (2005) - 2003
- [j6]Ioannis Iliopoulos, Sophia Tsoka, Miguel A. Andrade, Anton J. Enright, Mark Carroll, Patrick Poullet, Vasilis J. Promponas, Theodore Liakopoulos, Giorgos Palaios, Claude Pasquier, Stavros J. Hamodrakas, Javier Tamames, Asutosh T. Yagnik, Anna Tramontano, Damien Devos, Christian Blaschke, Alfonso Valencia, David Brett, David M. A. Martin, Christophe Leroy, Isidore Rigoutsos, Chris Sander, Christos A. Ouzounis:
Evaluation of annotation strategies using an entire genome sequence. Bioinform. 19(6): 717-726 (2003) - [j5]Paul J. Janssen, Anton J. Enright, Benjamin Audit, Ildefonso Cases, Leon Goldovsky, Nicola Harte, Victor Kunin, Christos A. Ouzounis:
COmplete GENome Tracking (COGENT): A Flexible Data Environment for Computational Genomics. Bioinform. 19(11): 1451-1452 (2003) - 2001
- [j4]Richard M. R. Coulson, Anton J. Enright, Christos A. Ouzounis:
Transcription-associated protein families are primarily taxon-specific. Bioinform. 17(1): 95-97 (2001) - [j3]Anton J. Enright, Christos A. Ouzounis:
BioLayout-an automatic graph layout algorithm for similarity visualization. Bioinform. 17(9): 853-854 (2001) - [c1]Ioannis Iliopoulos, Anton J. Enright, Christos A. Ouzounis:
TEXTQUEST: Document Clustering of MEDLINE Abstracts For Concept Discovery In Molecular Biology. Pacific Symposium on Biocomputing 2001: 384-395 - 2000
- [j2]Anton J. Enright, Christos A. Ouzounis:
GeneRAGE: a robust algorithm for sequence clustering and domain detection. Bioinform. 16(5): 451-457 (2000) - [j1]Vasilis J. Promponas, Anton J. Enright, Sophia Tsoka, David P. Kreil, Christophe Leroy, Stavros J. Hamodrakas, Chris Sander, Christos A. Ouzounis:
CAST: an iterative algorithm for the complexity analysis of sequence tracts. Bioinform. 16(10): 915-922 (2000)
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