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2020 – today
- 2023
[j12]Chit Tong Lio
, Gordon Grabert, Zakaria Louadi, Amit Fenn, Jan Baumbach, Tim Kacprowski, Markus List, Olga Tsoy:
Systematic analysis of alternative splicing in time course data using Spycone. Bioinform. 39(1) (2023)- [c2]Philip Hempel, Theresa Bender, Ennio Idrobo-Ávila, Henning Dathe, Dagmar Krefting, Tim Kacprowski, Nicolai Spicher:
Quantifying Alterations Over Time in ST-Segment/T-Wave Amplitudes During Elective Percutaneous Coronary Intervention. CinC 2023: 1-4 - 2022
- [j11]Judith Bernett, Dominik Krupke, Sepideh Sadegh, Jan Baumbach, Sándor P. Fekete, Tim Kacprowski, Markus List, David B. Blumenthal:
Robust disease module mining via enumeration of diverse prize-collecting Steiner trees. Bioinform. 38(6): 1600-1606 (2022) - [c1]Philip Gemke, Nicolai Spicher, Tim Kacprowski:
An LSTM-based Listener for Early Detection of Heart Disease. CinC 2022: 1-4 - 2021
- [j10]Olga Lazareva, Stefan Canzar, Kevin Yuan, Jan Baumbach, David B. Blumenthal, Paolo Tieri, Tim Kacprowski, Markus List:
BiCoN: network-constrained biclustering of patients and omics data. Bioinform. 37(16): 2398-2404 (2021) - [j9]Quirin Manz, Olga Tsoy, Amit Fenn, Jan Baumbach, Uwe Völker, Markus List, Tim Kacprowski:
ASimulatoR: splice-aware RNA-Seq data simulation. Bioinform. 37(18): 3008-3010 (2021) - [j8]Zakaria Louadi, Kevin Yuan, Alexander Greß, Olga Tsoy, Olga V. Kalinina, Jan Baumbach, Tim Kacprowski, Markus List:
DIGGER: exploring the functional role of alternative splicing in protein interactions. Nucleic Acids Res. 49(Database-Issue): D309-D318 (2021) - [j7]Alexander G. B. Grønning, Mhaned Oubounyt, Kristiyan Kanev, Jesper Lund, Tim Kacprowski, Dietmar Zehn, Richard Röttger, Jan Baumbach:
Enabling single-cell trajectory network enrichment. Nat. Comput. Sci. 1(2): 153-163 (2021) - [i2]Julian O. Matschinske, Julian Späth, Reza Nasirigerdeh, Reihaneh Torkzadehmahani, Anne Hartebrodt, Balázs Orbán, Sándor Fejér, Olga I. Zolotareva, Mohammad Bakhtiari, Béla Bihari, Marcus D. Bloice, Nina C. Donner, Walid Fdhila, Tobias Frisch, Anne-Christin Hauschild, Dominik Heider, Andreas Holzinger, Walter Hötzendorfer, Jan Hospes, Tim Kacprowski, Markus Kastelitz, Markus List, Rudolf Mayer, Mónika Moga, Heimo Müller, Anastasia Pustozerova, Richard Röttger, Anna Saranti, Harald H. H. W. Schmidt, Christof Tschohl, Nina Kerstin Wenke, Jan Baumbach:
The FeatureCloud AI Store for Federated Learning in Biomedicine and Beyond. CoRR abs/2105.05734 (2021) - 2020
- [j6]David B. Blumenthal, Lorenzo Viola, Markus List, Jan Baumbach, Paolo Tieri, Tim Kacprowski:
EpiGEN: an epistasis simulation pipeline. Bioinform. 36(19): 4957-4959 (2020) - [j5]Janine Arloth, Gökcen Eraslan, Till F. M. Andlauer, Jade Martins, Stella Iurato, Brigitte Kühnel, Melanie Waldenberger, Josef Frank, Ralf Gold, Bernhard Hemmer, Felix Luessi, Sandra Nischwitz, Friedemann Paul, Heinz Wiendl, Christian Gieger, Stefanie Heilmann-Heimbach, Tim Kacprowski, Matthias Laudes, Thomas Meitinger, Annette Peters, Rajesh Rawal, Konstantin Strauch, Susanne Lucae, Bertram Müller-Myhsok, Marcella Rietschel, Fabian J. Theis, Elisabeth B. Binder, Nikola S. Müller:
DeepWAS: Multivariate genotype-phenotype associations by directly integrating regulatory information using deep learning. PLoS Comput. Biol. 16(2) (2020) - [i1]Reihaneh Torkzadehmahani, Reza Nasirigerdeh, David B. Blumenthal, Tim Kacprowski, Markus List, Julian O. Matschinske, Julian Späth, Nina Kerstin Wenke, Béla Bihari, Tobias Frisch, Anne Hartebrodt, Anne-Christin Hauschild, Dominik Heider, Andreas Holzinger, Walter Hötzendorfer, Markus Kastelitz, Rudolf Mayer, Cristian Nogales, Anastasia Pustozerova, Richard Röttger, Harald H. H. W. Schmidt, Ameli Schwalber, Christof Tschohl, Andrea Wohner, Jan Baumbach:
Privacy-preserving Artificial Intelligence Techniques in Biomedicine. CoRR abs/2007.11621 (2020)
2010 – 2019
- 2018
- [j4]Ron Henkel, Robert Hoehndorf, Tim Kacprowski, Christian Knüpfer, Wolfram Liebermeister, Dagmar Waltemath:
Notions of similarity for systems biology models. Briefings Bioinform. 19(1): 77-88 (2018) - 2017
- [j3]Ron Henkel, Robert Hoehndorf, Tim Kacprowski, Christian Knüpfer, Wolfram Liebermeister, Dagmar Waltemath:
Notions of similarity for systems biology models. Briefings Bioinform. 18(5): 902 (2017) - 2013
- [j2]Tim Kacprowski, Nadezhda T. Doncheva, Mario Albrecht:
NetworkPrioritizer: a versatile tool for network-based prioritization of candidate disease genes or other molecules. Bioinform. 29(11): 1471-1473 (2013) - 2011
- [j1]Dorothea Emig, Tim Kacprowski, Mario Albrecht:
Measuring and analyzing tissue specificity of human genes and protein complexes. EURASIP J. Bioinform. Syst. Biol. 2011: 5 (2011)
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