Approximation and Fixed Parameter Algorithms for the Approximate Cover Problem. - Blin, Guillaume; Popa, Alexandru; Raffinot, Mathieu; Uricaru, Raluca (2023)

Consensus clustering applied to multi-omics disease subtyping. - Brière, Galadriel; Darbo, Élodie; Thébault, Patricia; Uricaru, Raluca (BMC Bioinform., 2021)

On improving the approximation ratio of the r-shortest common superstring problem. - Braquelaire, Tristan; Gasparoux, Marie; Raffinot, Mathieu; Uricaru, Raluca (CoRR, 2018)

On the Shortest Common Superstring of NGS Reads. - Braquelaire, Tristan; Gasparoux, Marie; Raffinot, Mathieu; Uricaru, Raluca (2017)

A note on the shortest common superstring of NGS reads. - Braquelaire, Tristan; Gasparoux, Marie; Raffinot, Mathieu; Uricaru, Raluca (CoRR, 2016)

Advantages of mixing bioinformatics and visualization approaches for analyzing sRNA-mediated regulatory bacterial networks. - Thébault, Patricia; Bourqui, Romain; Benchimol, William; Gaspin, Christine; Sirand-Pugnet, Pascal; Uricaru, Raluca; Dutour, Isabelle (Briefings Bioinform., 2015)

YOC, A new strategy for pairwise alignment of collinear genomes. - Uricaru, Raluca; Michotey, Célia; Chiapello, Hélène; Rivals, Eric (BMC Bioinform., 2015)

Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph. - Benoit, Gaëtan; Lemaitre, Claire; Lavenier, Dominique; Drezen, Erwan; Dayris, Thibault; Uricaru, Raluca; Rizk, Guillaume (BMC Bioinform., 2015)

KISSPLICE: de-novo calling alternative splicing events from RNA-seq data. - Sacomoto, Gustavo Akio Tominaga; Kielbassa, Janice; Chikhi, Rayan; Uricaru, Raluca; Antoniou, Pavlos; Sagot, Marie-France; Peterlongo, Pierre; Lacroix, Vincent (BMC Bioinform., 2012)

Novel Definition and Algorithm for Chaining Fragments with Proportional Overlaps. - Uricaru, Raluca; Mancheron, Alban; Rivals, Eric (J. Comput. Biol., 2011)

Algorithms for genome comparison applied to bacterial genomes. (Algorithmes de comparaison de génomes appliqués aux génomes bactériens). - Uricaru, Raluca (2010)

Novel Definition and Algorithm for Chaining Fragments with Proportional Overlaps. - Uricaru, Raluca; Mancheron, Alban; Rivals, Eric (2010)

Reliable Bacterial Genome Comparison Tools. - Rivals, Eric; Mancheron, Alban; Uricaru, Raluca (ERCIM News, 2010)

Genic Interaction Extraction from MEDLINE Abstracts - A Case Study. - Uricaru, Raluca; Ciortuz, Liviu (Sci. Ann. Cuza Univ., 2005)