Approximation and Fixed Parameter Algorithms for the Approximate Cover Problem - Guillaume Blin; Alexandru Popa; Mathieu Raffinot; Raluca Uricaru (String Processing and Information Retrieval - 30th International Symposium, SPIRE 2023, Pisa, Italy, September 26-28, 2023, Proceedings, 2023)

Consensus clustering applied to multi-omics disease subtyping - Galadriel Brière; Élodie Darbo; Patricia Thébault; Raluca Uricaru (BMC Bioinform., 2021)

On improving the approximation ratio of the r-shortest common superstring problem - Tristan Braquelaire; Marie Gasparoux; Mathieu Raffinot; Raluca Uricaru (CoRR, 2018)

On the Shortest Common Superstring of NGS Reads - Tristan Braquelaire; Marie Gasparoux; Mathieu Raffinot; Raluca Uricaru (Theory and Applications of Models of Computation - 14th Annual Conference, TAMC 2017, Bern, Switzerland, April 20-22, 2017, Proceedings, 2017)

A note on the shortest common superstring of NGS reads - Tristan Braquelaire; Marie Gasparoux; Mathieu Raffinot; Raluca Uricaru (CoRR, 2016)

Advantages of mixing bioinformatics and visualization approaches for analyzing sRNA-mediated regulatory bacterial networks - Patricia Thébault; Romain Bourqui; William Benchimol; Christine Gaspin; Pascal Sirand-Pugnet; Raluca Uricaru; Isabelle Dutour (Briefings Bioinform., 2015)

YOC, A new strategy for pairwise alignment of collinear genomes - Raluca Uricaru; Célia Michotey; Hélène Chiapello; Eric Rivals (BMC Bioinform., 2015)

Reference-free compression of high throughput sequencing data with a probabilistic de Bruijn graph - Gaëtan Benoit; Claire Lemaitre; Dominique Lavenier; Erwan Drezen; Thibault Dayris; Raluca Uricaru; Guillaume Rizk (BMC Bioinform., 2015)

KISSPLICE: de-novo calling alternative splicing events from RNA-seq data - Gustavo Akio Tominaga Sacomoto; Janice Kielbassa; Rayan Chikhi; Raluca Uricaru; Pavlos Antoniou; Marie-France Sagot; Pierre Peterlongo; Vincent Lacroix (BMC Bioinform., 2012)

Novel Definition and Algorithm for Chaining Fragments with Proportional Overlaps - Raluca Uricaru; Alban Mancheron; Eric Rivals (J. Comput. Biol., 2011)

Algorithms for genome comparison applied to bacterial genomes. (Algorithmes de comparaison de génomes appliqués aux génomes bactériens) - Raluca Uricaru (Montpellier 2 University, France, 2010)

Novel Definition and Algorithm for Chaining Fragments with Proportional Overlaps - Raluca Uricaru; Alban Mancheron; Eric Rivals (Comparative Genomics - International Workshop, RECOMB-CG 2010, Ottawa, Canada, October 9-11, 2010. Proceedings, 2010)

Reliable Bacterial Genome Comparison Tools - Eric Rivals; Alban Mancheron; Raluca Uricaru (ERCIM News, 2010)

Genic Interaction Extraction from MEDLINE Abstracts - A Case Study - Raluca Uricaru; Liviu Ciortuz (Sci. Ann. Cuza Univ., 2005)