Matrix-Variate Regression for Sparse, Low-Rank Estimation of Brain Connectivities Associated With a Clinical Outcome - Damian Brzyski; Xixi Hu; Joaquín Goñi; Beau M. Ances; Timothy W. Randolph; Jaroslaw Harezlak (IEEE Trans. Biomed. Eng., 2024)

Preserving Human Large-Scale Brain Connectivity Fingerprint Identifiability with Random Projections - Duy Duong-Tran; Mark Magsino; Joaquín Goñi; Li Shen (IEEE International Symposium on Biomedical Imaging, ISBI 2024, Athens, Greece, May 27-30, 2024, 2024)

Volume-Optimal Persistence Homological Scaffolds of Hemodynamic Networks Covary with MEG Theta-Alpha Aperiodic Dynamics - Nghi Nguyen; Tao Hou; Enrico Amico; Jingyi Zheng; Huajun Huang; Alan D. Kaplan; Giovanni Petri; Joaquín Goñi; Ralph Kaufmann; Yize Zhao; Duy Duong-Tran; Li Shen (Medical Image Computing and Computer Assisted Intervention - MICCAI 2024 - 27th International Conference, Marrakesh, Morocco, October 6-10, 2024, Proceedings, Part III, 2024)

Improving Functional Connectome Fingerprinting with Degree-Normalization - Benjamin Chiêm; Kausar Abbas; Enrico Amico; Duy Anh Duong-Tran; Frédéric Crevecoeur; Joaquín Goñi (Brain Connect., 2022)

Investigating cognitive ability using action-based models of structural brain networks - Viplove Arora; Enrico Amico; Joaquín Goñi; Mario Ventresca (J. Complex Networks, 2022)

Geodesic Distance on Optimally Regularized Functional Connectomes Uncovers Individual Fingerprints - Kausar Abbas; Mintao Liu; Manasij Venkatesh; Enrico Amico; Alan David Kaplan; Mario Ventresca; Luiz Pessoa; Jaroslaw Harezlak; Joaquín Goñi (Brain Connect., 2021)

Interactive Visualization of Deep Learning for 3D Brain Data Analysis - Huang Li; Shiaofen Fang; Joaquín Goñi; Andrew J. Saykin; Li Shen (20th IEEE International Conference on Cognitive Informatics & Cognitive Computing, ICCI*CC 2021, Banff, AB, Canada, October 29-31, 2021, 2021)

Brain-wide structural connectivity alterations under the control of Alzheimer risk genes - Jingwen Yan; V. Vinesh Raja; Zhi Huang; Enrico Amico; Kwangsik Nho; Shiaofen Fang; Olaf Sporns; Yu-Chien Wu; Andrew J. Saykin; Joaquín Goñi; Li Shen (Int. J. Comput. Biol. Drug Des., 2020)

The disengaging brain: Dynamic transitions from cognitive engagement and alcoholism risk - Enrico Amico; Mario Dzemidzic; Brandon G. Oberlin; Claire R. Carron; Jaroslaw Harezlak; Joaquín Goñi; David A. Kareken (NeuroImage, 2020)

GEFF: Graph embedding for functional fingerprinting - Kausar Abbas; Enrico Amico; Diana Otero Svaldi; Uttara Tipnis; Duy Anh Duong-Tran; Mintao Liu; Meenusree Rajapandian; Jaroslaw Harezlak; Beau M. Ances; Joaquín Goñi (NeuroImage, 2020)

Modeling Communication Processes in the Human Connectome through Cooperative Learning - Uttara Tipnis; Enrico Amico; Mario Ventresca; Joaquín Goñi (IEEE Trans. Netw. Sci. Eng., 2020)

A Sparsity Inducing Nuclear-Norm Estimator (SpINNEr) for Matrix-Variate Regression in Brain Connectivity Analysis - Damian Brzyski; Xixi Hu; Joaquín Goñi; Beau M. Ances; Timothy W. Randolph; Jaroslaw Harezlak (CoRR, 2020)

Uncovering multi-site identifiability based on resting-state functional connectomes - Sumra Bari; Enrico Amico; Nicole L. Vike; Thomas M. Talavage; Joaquín Goñi (NeuroImage, 2019)

Joint exploration and mining of memory-relevant brain anatomic and connectomic patterns via a three-way association model - Jingwen Yan; Kefei Liu; Huang Lv; Enrico Amico; Shannon L. Risacher; Yu-Chien Wu; Shiaofen Fang; Olaf Sporns; Andrew J. Saykin; Joaquín Goñi; Li Shen (15th IEEE International Symposium on Biomedical Imaging, ISBI 2018, Washington, DC, USA, April 4-7, 2018, 2018)

Heritability Estimation of Reliable Connectomic Features - Linhui Xie; Enrico Amico; Paul Salama; Yu-Chien Wu; Shiaofen Fang; Olaf Sporns; Andrew J. Saykin; Joaquín Goñi; Jingwen Yan; Li Shen (Connectomics in NeuroImaging - Second International Workshop, CNI 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 20, 2018, Proceedings, 2018)

Towards Subject and Diagnostic Identifiability in the Alzheimer's Disease Spectrum Based on Functional Connectomes - Diana O. Svaldi; Joaquín Goñi; Apoorva Bharthur Sanjay; Enrico Amico; Shannon L. Risacher; John D. West; Mario Dzemidzic; Andrew J. Saykin; Liana G. Apostolova (Graphs in Biomedical Image Analysis - and - Integrating Medical Imaging and Non-Imaging Modalities - Second International Workshop, GRAIL 2018 - and - First International Workshop, Beyond MIC 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 20, 2018, Proceedings, 2018)

Brain explorer for connectomic analysis - Huang Li; Shiaofen Fang; Joey A. Contreras; John D. West; Shannon L. Risacher; Yang Wang; Olaf Sporns; Andrew J. Saykin; Joaquín Goñi; Li Shen (Brain Informatics, 2017)

Mapping the functional connectome traits of levels of consciousness - Enrico Amico; Daniele Marinazzo; Carol Di Perri; Lizette Heine; Jitka Annen; Charlotte Martial; Mario Dzemidzic; Muriëlle Kirsch; Vincent Bonhomme; Steven Laureys; Joaquín Goñi (NeuroImage, 2017)

BECA: A Software Tool for Integrated Visualization of Human Brain Data - Huang Li; Shiaofen Fang; Bob Zigon; Olaf Sporns; Andrew J. Saykin; Joaquín Goñi; Li Shen (Brain Informatics - International Conference, BI 2017, Beijing, China, November 16-18, 2017, Proceedings, 2017)

Dynamic Generative Model of the Human Brain in Resting-State - Dali Guo; Viplove Arora; Enrico Amico; Joaquín Goñi; Mario Ventresca (Complex Networks & Their Applications VI - Proceedings of Complex Networks 2017 (The Sixth International Conference on Complex Networks and Their Applications), COMPLEX NETWORKS 2017, Lyon, France, November 29 - December 1, 2017, 2017)

Generative models of the human connectome - Richard F. Betzel; Andrea Avena-Koenigsberger; Joaquín Goñi; Ye He; Marcel A. de Reus; Alessandra Griffa; Petra E. Vértes; Bratislav Misic; Jean-Philippe Thiran; Patric Hagmann; Martijn P. van den Heuvel; Xi-Nian Zuo; et al. (NeuroImage, 2016)

Multigraph Visualization for Feature Classification of Brain Network Data - Jiachen Wang; Shiaofen Fang; Huang Li; Joaquín Goñi; Andrew J. Saykin; Li Shen (7th International EuroVis Workshop on Visual Analytics, EuroVA@EuroVis 2016, Groningen, The Netherlands, June 6-7, 2016, 2016)

Integrated Visualization of Human Brain Connectome Data - Huang Li; Shiaofen Fang; Joaquín Goñi; Joey A. Contreras; Yanhua Liang; Chengtao Cai; John D. West; Shannon L. Risacher; Yang Wang; Olaf Sporns; Andrew J. Saykin; Li Shen (Brain Informatics and Health - 8th International Conference, BIH 2015, London, UK, August 30 - September 2, 2015. Proceedings, 2015)

Identifying Connectome Module Patterns via New Balanced Multi-graph Normalized Cut - Hongchang Gao; Chengtao Cai; Jingwen Yan; Lin Yan; Joaquín Goñi Cortes; Yang Wang; Feiping Nie; John D. West; Andrew J. Saykin; Li Shen; Heng Huang (Medical Image Computing and Computer-Assisted Intervention - MICCAI 2015 - 18th International Conference Munich, Germany, October 5-9, 2015, Proceedings, Part II, 2015)

Multi-scale integration and predictability in resting state brain activity - Artemy Kolchinsky; Martijn P. van den Heuvel; Alessandra Griffa; Patric Hagmann; Luis M. Rocha; Olaf Sporns; Joaquín Goñi (Frontiers Neuroinformatics, 2014)

Changes in structural and functional connectivity among resting-state networks across the human lifespan - Richard F. Betzel; Lisa Byrge; Ye He; Joaquín Goñi; Xi-Nian Zuo; Olaf Sporns (NeuroImage, 2014)

A Network Convergence Zone in the Hippocampus - Bratislav Misic; Joaquín Goñi; Richard F. Betzel; Olaf Sporns; Anthony Randal McIntosh (PLoS Comput. Biol., 2014)

Multi-scale community organization of the human structural connectome and its relationship with resting-state functional connectivity - Richard F. Betzel; Alessandra Griffa; Andrea Avena-Koenigsberger; Joaquín Goñi (Netw. Sci., 2013)

Robust estimation of fractal measures for characterizing the structural complexity of the human brain: Optimization and reproducibility - Joaquín Goñi; Olaf Sporns; Hu Cheng; Maite Aznárez-Sanado; Yang Wang; Santiago Josa; Gonzalo Arrondo; Vincent P. Mathews; Tom A. Hummer; William G. Kronenberger; Andrea Avena-Koenigsberger; Andrew J. Saykin; et al. (NeuroImage, 2013)

Modeling the effector - regulatory T cell cross-regulation reveals the intrinsic character of relapses in Multiple Sclerosis - Nieves Vélez de Mendizábal; Jorge Carneiro; Ricard V. Solé; Joaquín Goñi; Jean Bragard; Ivan Martinez-Forero; Sara Martinez-Pasamar; Jorge Sepulcre; Francisco Javier Torrealdea; Francesca Bagnato; Jordi García-Ojalvo; Pablo Villoslada (BMC Syst. Biol., 2011)

The semantic organization of the animal category: evidence from semantic verbal fluency and network theory - Joaquín Goñi; Gonzalo Arrondo; Jorge Sepulcre; Iñigo Martincorena; Nieves Vélez de Mendizábal; Bernat Corominas-Murtra; Bartolomé Bejarano; Sergio Ardanza-Trevijano; Herminia Peraita; Dennis P. Wall; Pablo Villoslada (Cogn. Process., 2011)

Switcher-Random-Walks: a Cognitive-Inspired Mechanism for Network Exploration - Joaquín Goñi; Iñigo Martincorena; Bernat Corominas-Murtra; Gonzalo Arrondo; Sergio Ardanza-Trevijano; Pablo Villoslada (Int. J. Bifurc. Chaos, 2010)

Exploring the randomness of Directed Acyclic Networks - Joaquín Goñi; Bernat Corominas-Murtra; Ricard V. Solé; Carlos Rodríguez-Caso (CoRR, 2010)

Hierarchy and information in feedforward networks - Bernat Corominas-Murtra; Joaquín Goñi; Carlos Rodríguez-Caso; Ricard V. Solé (CoRR, 2010)

Brain pathways of verbal working memory: A lesion-function correlation study - Jorge Sepulcre; Joseph C. Masdeu; María A. Pastor; Joaquín Goñi; Carla Barbosa; Bartolomé Bejarano; Pablo Villoslada (NeuroImage, 2009)

Switcher-random-walks: a cognitive-inspired mechanism for network exploration - Joaquín Goñi; Iñigo Martincorena; Bernat Corominas-Murtra; Gonzalo Arrondo; Sergio Ardanza-Trevijano; Pablo Villoslada (CoRR, 2009)

A computational analysis of protein-protein interaction networks in neurodegenerative diseases - Joaquín Goñi; Francisco José Esteban; Nieves Vélez de Mendizábal; Jorge Sepulcre; Sergio Ardanza-Trevijano; Ion Agirrezabal; Pablo Villoslada (BMC Syst. Biol., 2008)

Mapping the brain pathways of declarative verbal memory: Evidence from white matter lesions in the living human brain - Jorge Sepulcre; Joseph C. Masdeu; Jaume Sastre-Garriga; Joaquín Goñi; Nieves Vélez de Mendizábal; Beatriz Duque; María A. Pastor; Bartolomé Bejarano; Pablo Villoslada (NeuroImage, 2008)

Fractal dimension and white matter changes in multiple sclerosis - Francisco José Esteban; Jorge Sepulcre; Nieves Vélez de Mendizábal; Joaquín Goñi; Juan Navas; Juan Ruiz de Miras; Bartolomé Bejarano; Joseph C. Masdeu; Pablo Villoslada (NeuroImage, 2007)