BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services. - Katayama, Toshiaki; Kawashima, Shuichi; Micklem, Gos; Kawano, Shin; Kim, Jin-Dong; Kocbek, Simon; Okamoto, Shinobu; Wang, Yue; Wu, Hongyan; Yamaguchi, Atsuko; Yamamoto, Yasunori; Antezana, Erick; et al. (F1000Research, 2019)

Systematic Drug Repositioning for a Wide Range of Diseases with Integrative Analyses of Phenotypic and Molecular Data. - Iwata, Hiroaki; Sawada, Ryusuke; Mizutani, Sayaka; Yamanishi, Yoshihiro (J. Chem. Inf. Model., 2015)

Large-Scale Prediction of Beneficial Drug Combinations Using Drug Efficacy and Target Profiles. - Iwata, Hiroaki; Sawada, Ryusuke; Mizutani, Sayaka; Kotera, Masaaki; Yamanishi, Yoshihiro (J. Chem. Inf. Model., 2015)

Target-Based Drug Repositioning Using Large-Scale Chemical-Protein Interactome Data. - Sawada, Ryusuke; Iwata, Hiroaki; Mizutani, Sayaka; Yamanishi, Yoshihiro (J. Chem. Inf. Model., 2015)

Pharmacoepidemiological characterization of drug-induced adverse reaction clusters towards understanding of their mechanisms. - Mizutani, Sayaka; Noro, Yousuke; Kotera, Masaaki; Goto, Susumu (Comput. Biol. Chem., 2014)

Inferring protein domains associated with drug side effects based on drug-target interaction network. - Iwata, Hiroaki; Mizutani, Sayaka; Tabei, Yasuo; Kotera, Masaaki; Goto, Susumu; Yamanishi, Yoshihiro (BMC Syst. Biol., 2013)

Relating drug-protein interaction network with drug side effects. - Mizutani, Sayaka; Pauwels, Edouard; Stoven, Véronique; Goto, Susumu; Yamanishi, Yoshihiro (Bioinform., 2012)

An improved method for identifying functionally linked proteins using phylogenetic profiles. - Cokus, Shawn; Mizutani, Sayaka; Pellegrini, Matteo (BMC Bioinform., 2007)