BibTeX records: Johannes Jaeger

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@article{DBLP:journals/corr/abs-2307-07515,
  author       = {Johannes Jaeger},
  title        = {Artificial intelligence is algorithmic mimicry: why artificial "agents"
                  are not (and won't be) proper agents},
  journal      = {CoRR},
  volume       = {abs/2307.07515},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2307.07515},
  doi          = {10.48550/ARXIV.2307.07515},
  eprinttype    = {arXiv},
  eprint       = {2307.07515},
  timestamp    = {Mon, 24 Jul 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2307-07515.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/VerdCJ17,
  author       = {Berta Verd and
                  Anton Crombach and
                  Johannes Jaeger},
  title        = {Dynamic Maternal Gradients Control Timing and Shift-Rates for Drosophila
                  Gap Gene Expression},
  journal      = {PLoS Comput. Biol.},
  volume       = {13},
  number       = {2},
  year         = {2017},
  url          = {https://doi.org/10.1371/journal.pcbi.1005285},
  doi          = {10.1371/JOURNAL.PCBI.1005285},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/VerdCJ17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcsb/VillaverdeHSB0C15,
  author       = {Alejandro Fern{\'{a}}ndez Villaverde and
                  David Henriques and
                  Kieran Smallbone and
                  Sophia Bongard and
                  Joachim Schmid and
                  Damjan Cicin{-}Sain and
                  Anton Crombach and
                  Julio Saez{-}Rodriguez and
                  Klaus Mauch and
                  Eva Balsa{-}Canto and
                  Pedro Mendes and
                  Johannes Jaeger and
                  Julio R. Banga},
  title        = {BioPreDyn-bench: a suite of benchmark problems for dynamic modelling
                  in systems biology},
  journal      = {{BMC} Syst. Biol.},
  volume       = {9},
  pages        = {8},
  year         = {2015},
  url          = {https://doi.org/10.1186/s12918-015-0144-4},
  doi          = {10.1186/S12918-015-0144-4},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/VillaverdeHSB0C15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nar/Cicin-SainPCWJTRJ15,
  author       = {Damjan Cicin{-}Sain and
                  Antonio Hermoso Pulido and
                  Anton Crombach and
                  Karl R. Wotton and
                  Eva Jim{\'{e}}nez{-}Guri and
                  Jean{-}Fran{\c{c}}ois Taly and
                  Guglielmo Roma and
                  Johannes Jaeger},
  title        = {SuperFly: a comparative database for quantified spatio-temporal gene
                  expression patterns in early dipteran embryos},
  journal      = {Nucleic Acids Res.},
  volume       = {43},
  number       = {Database-Issue},
  pages        = {751--755},
  year         = {2015},
  url          = {https://doi.org/10.1093/nar/gku1142},
  doi          = {10.1093/NAR/GKU1142},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/Cicin-SainPCWJTRJ15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/biosystems/CrombachGJ14,
  author       = {Anton Crombach and
                  M{\'{o}}nica A. Garc{\'{\i}}a{-}Solache and
                  Johannes Jaeger},
  title        = {Evolution of early development in dipterans: Reverse-engineering the
                  gap gene network in the moth midge Clogmia albipunctata (Psychodidae)},
  journal      = {Biosyst.},
  volume       = {123},
  pages        = {74--85},
  year         = {2014},
  url          = {https://doi.org/10.1016/j.biosystems.2014.06.003},
  doi          = {10.1016/J.BIOSYSTEMS.2014.06.003},
  timestamp    = {Thu, 20 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/biosystems/CrombachGJ14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcsb/VerdCJ14,
  author       = {Berta Verd and
                  Anton Crombach and
                  Johannes Jaeger},
  title        = {Classification of transient behaviours in a time-dependent toggle
                  switch model},
  journal      = {{BMC} Syst. Biol.},
  volume       = {8},
  pages        = {43},
  year         = {2014},
  url          = {https://doi.org/10.1186/1752-0509-8-43},
  doi          = {10.1186/1752-0509-8-43},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/VerdCJ14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/corr/VillaverdeHSB0CCSMBMJB14,
  author       = {Alejandro Fern{\'{a}}ndez Villaverde and
                  David Henriques and
                  Kieran Smallbone and
                  Sophia Bongard and
                  Joachim Schmid and
                  Damjan Cicin{-}Sain and
                  Anton Crombach and
                  Julio Saez{-}Rodriguez and
                  Klaus Mauch and
                  Eva Balsa{-}Canto and
                  Pedro Mendes and
                  Johannes Jaeger and
                  Julio R. Banga},
  title        = {BioPreDyn-bench: benchmark problems for kinetic modelling in systems
                  biology},
  journal      = {CoRR},
  volume       = {abs/1407.5856},
  year         = {2014},
  url          = {http://arxiv.org/abs/1407.5856},
  eprinttype    = {arXiv},
  eprint       = {1407.5856},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/VillaverdeHSB0CCSMBMJB14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/BeckerBCHJBJ13,
  author       = {Kolja Becker and
                  Eva Balsa{-}Canto and
                  Damjan Cicin{-}Sain and
                  Astrid Hoermann and
                  Hilde Janssens and
                  Julio R. Banga and
                  Johannes Jaeger},
  title        = {Reverse-Engineering Post-Transcriptional Regulation of Gap Genes in
                  \emph{Drosophila melanogaster}},
  journal      = {PLoS Comput. Biol.},
  volume       = {9},
  number       = {10},
  year         = {2013},
  url          = {https://doi.org/10.1371/journal.pcbi.1003281},
  doi          = {10.1371/JOURNAL.PCBI.1003281},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/BeckerBCHJBJ13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/CrombachWCAJ12,
  author       = {Anton Crombach and
                  Karl R. Wotton and
                  Damjan Cicin{-}Sain and
                  Maksat Ashyraliyev and
                  Johannes Jaeger},
  title        = {Efficient Reverse-Engineering of a Developmental Gene Regulatory Network},
  journal      = {PLoS Comput. Biol.},
  volume       = {8},
  number       = {7},
  year         = {2012},
  url          = {https://doi.org/10.1371/journal.pcbi.1002589},
  doi          = {10.1371/JOURNAL.PCBI.1002589},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/CrombachWCAJ12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcsb/JostinsJ10,
  author       = {Luke Jostins and
                  Johannes Jaeger},
  title        = {Reverse engineering a gene network using an asynchronous parallel
                  evolution strategy},
  journal      = {{BMC} Syst. Biol.},
  volume       = {4},
  pages        = {17},
  year         = {2010},
  url          = {https://doi.org/10.1186/1752-0509-4-17},
  doi          = {10.1186/1752-0509-4-17},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/JostinsJ10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@incollection{DBLP:books/mit/10/JaegerM10,
  author       = {Johannes Jaeger and
                  Nicholas A. M. Monk},
  editor       = {Neil D. Lawrence and
                  Mark A. Girolami and
                  Magnus Rattray and
                  Guido Sanguinetti},
  title        = {Reverse Engineering of Gene Regulatory Networks},
  booktitle    = {Learning and Inference in Computational Systems Biology},
  series       = {Computational molecular biology},
  pages        = {9--34},
  publisher    = {{MIT} Press},
  year         = {2010},
  timestamp    = {Fri, 15 May 2020 12:36:51 +0200},
  biburl       = {https://dblp.org/rec/books/mit/10/JaegerM10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/AshyraliyevSJBAJ09,
  author       = {Maksat Ashyraliyev and
                  Ken Siggens and
                  Hilde Janssens and
                  Joke G. Blom and
                  Michael Akam and
                  Johannes Jaeger},
  title        = {Gene Circuit Analysis of the Terminal Gap Gene \emph{huckebein}},
  journal      = {PLoS Comput. Biol.},
  volume       = {5},
  number       = {10},
  year         = {2009},
  url          = {https://doi.org/10.1371/journal.pcbi.1000548},
  doi          = {10.1371/JOURNAL.PCBI.1000548},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/AshyraliyevSJBAJ09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcsb/AshyraliyevJB08,
  author       = {Maksat Ashyraliyev and
                  Johannes Jaeger and
                  Joke G. Blom},
  title        = {Parameter estimation and determinability analysis applied to Drosophila
                  gap gene circuits},
  journal      = {{BMC} Syst. Biol.},
  volume       = {2},
  pages        = {83},
  year         = {2008},
  url          = {https://doi.org/10.1186/1752-0509-2-83},
  doi          = {10.1186/1752-0509-2-83},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/AshyraliyevJB08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ploscb/PerkinsJRG06,
  author       = {Theodore J. Perkins and
                  Johannes Jaeger and
                  John Reinitz and
                  Leon Glass},
  title        = {Reverse Engineering the Gap Gene Network of \emph{Drosophila melanogaster}},
  journal      = {PLoS Comput. Biol.},
  volume       = {2},
  number       = {5},
  year         = {2006},
  url          = {https://doi.org/10.1371/journal.pcbi.0020051},
  doi          = {10.1371/JOURNAL.PCBI.0020051},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/PerkinsJRG06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/isb/JaegerG02,
  author       = {Johannes Jaeger and
                  Brian C. Goodwin},
  title        = {Cellular oscillators in animal segmentation},
  journal      = {Silico Biol.},
  volume       = {2},
  number       = {2},
  pages        = {111--123},
  year         = {2002},
  url          = {http://content.iospress.com/articles/in-silico-biology/isb00031},
  timestamp    = {Thu, 20 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/isb/JaegerG02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

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