TrSDB: a proteome database of transcription factors - Antonio Hermoso; Daniel Aguilar; Francesc X. Avilés; Enrique Querol (Nucleic Acids Res., 2004)

On the Analysis of the Intersection of the Interactome and the Metabolome - Joan Planas-Iglesias; Daniel Aguilar; Baldomero Oliva (Proceedings of the 5th Annual Spanish Bioinformatics Conference, Barcelona, Catalonia, Spain, November 29-30, 2004, 2004)

SNOW: Standard NOmenclature Wizard to help searching for (bio) chemical standardized names - Daniel Aguilar; Baldomero Oliva; Francesc X. Avilés; Enrique Querol (Bioinform., 2003)

TranScout: prediction of gene expression regulatory proteins from their sequences - Daniel Aguilar; Baldomero Oliva; Francesc X. Avilés; Enrique Querol (Bioinform., 2002)