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Oleh Dzyubachyk
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2020 – today
- 2023
- [c12]Serban Vadineanu
, Daniël Maria Pelt, Oleh Dzyubachyk, Kees Joost Batenburg:
Reducing Manual Annotation Costs for Cell Segmentation by Upgrading Low-Quality Annotations. MILLanD@MICCAI 2023: 3-13 - 2022
- [j12]Aashley S. D. Sardjoe Mishre, Maaike E. Straat, Borja Martinez-Tellez, Andrea Mendez Gutierrez, Sander Kooijman
, Mariëtte R. Boon, Oleh Dzyubachyk, Andrew Webb, Patrick C. N. Rensen, Hermien E. Kan:
The Infrared Thermography Toolbox: An Open-access Semi-automated Segmentation Tool for Extracting Skin Temperatures in the Thoracic Region including Supraclavicular Brown Adipose Tissue. J. Medical Syst. 46(12): 89 (2022) - [c11]Serban Vadineanu, Daniël Maria Pelt, Oleh Dzyubachyk, Kees Joost Batenburg:
An Analysis of the Impact of Annotation Errors on the Accuracy of Deep Learning for Cell Segmentation. MIDL 2022: 1251-1267 - 2021
- [j11]Thijs W. van Harten
, Oleh Dzyubachyk
, Reinoud P. H. Bokkers
, Marieke J. H. Wermer, Matthias J. P. van Osch
:
On the ability to exploit signal fluctuations in pseudocontinuous arterial spin labeling for inferring the major flow territories from a traditional perfusion scan. NeuroImage 230: 117813 (2021) - [c10]Oleh Dzyubachyk, Roman I Koning, Aat A. Mulder, M. Christina Avramut, Frank G. A. Faas, Abraham J. Koster:
Intensity Correction and Standardization for Electron Microscopy Data. MIDL 2021: 148-157
2010 – 2019
- 2019
- [c9]Oleh Dzyubachyk
, Kirsten Koolstra
, Nicola Pezzotti
, Boudewijn P. F. Lelieveldt
, Andrew G. Webb, Peter Börnert:
Comparative Analysis of Magnetic Resonance Fingerprinting Dictionaries via Dimensionality Reduction. GLMI@MICCAI 2019: 44-52 - [i1]Kirsten Koolstra, Peter Börnert, Boudewijn P. F. Lelieveldt, Andrew G. Webb, Oleh Dzyubachyk:
Hierarchical stochastic neighbor embedding as a tool for visualizing the encoding capability of magnetic resonance fingerprinting dictionaries. CoRR abs/1910.02696 (2019) - 2017
- [j10]Evgeni Aizenberg
, Rosaline van den Berg, Zineb Ez-Zaitouni, Désirée van der Heijde, Monique Reijnierse, Oleh Dzyubachyk
, Boudewijn P. F. Lelieveldt
:
Computer-aided evaluation of inflammatory changes over time on MRI of the spine in patients with suspected axial spondyloarthritis: a feasibility study. BMC Medical Imaging 17(1): 55:1-55:9 (2017) - [j9]Inge A. Mulder
, Artem Khmelinskii
, Oleh Dzyubachyk
, Sebastiaan de Jong
, Nathalie Rieff, Marieke J. H. Wermer, Mathias Hoehn, Boudewijn P. F. Lelieveldt
, Arn M. J. M. van den Maagdenberg:
Automated Ischemic Lesion Segmentation in MRI Mouse Brain Data after Transient Middle Cerebral Artery Occlusion. Frontiers Neuroinformatics 11: 3 (2017) - [j8]Inge A. Mulder
, Artem Khmelinskii
, Oleh Dzyubachyk
, Sebastiaan de Jong
, Marieke J. H. Wermer, Mathias Hoehn, Boudewijn P. F. Lelieveldt
, Arn M. J. M. van den Maagdenberg:
MRI Mouse Brain Data of Ischemic Lesion after Transient Middle Cerebral Artery Occlusion. Frontiers Neuroinformatics 11: 51 (2017) - [j7]Rahil Shahzad, Qian Tao
, Oleh Dzyubachyk
, Marius Staring
, Boudewijn P. F. Lelieveldt
, Rob J. van der Geest
:
Fully-automatic left ventricular segmentation from long-axis cardiac cine MR scans. Medical Image Anal. 39: 44-55 (2017) - 2016
- [c8]Rahil Shahzad, Shan Gao, Qian Tao, Oleh Dzyubachyk, Rob J. van der Geest:
Automated Cardiovascular Segmentation in Patients with Congenital Heart Disease from 3D CMR Scans: Combining Multi-atlases and Level-Sets. RAMBO+HVSMR@MICCAI 2016: 147-155 - 2015
- [j6]Rahil Shahzad
, Oleh Dzyubachyk
, Marius Staring
, Joel Kullberg, Lars Johansson, Håkan Ahlström, Boudewijn P. F. Lelieveldt
, Rob J. van der Geest
:
Automated extraction and labelling of the arterial tree from whole-body MRA data. Medical Image Anal. 24(1): 28-40 (2015) - 2014
- [j5]Martin Maska
, Vladimír Ulman
, David Svoboda
, Pavel Matula, Petr Matula
, Cristina Ederra, Ainhoa Urbiola, Tomás España, Subramanian Venkatesan
, Deepak M. W. Balak
, Pavel Karas, Tereza Bolcková, Markéta Streitová, Craig Carthel, Stefano Coraluppi, Nathalie Harder
, Karl Rohr, Klas E. G. Magnusson, Joakim Jaldén
, Helen M. Blau, Oleh Dzyubachyk
, Pavel Krízek, Guy M. Hagen
, David Pastor-Escuredo
, Daniel Jimenez-Carretero
, María J. Ledesma-Carbayo
, Arrate Muñoz-Barrutia, Erik Meijering, Michal Kozubek
, Carlos Ortiz-de-Solorzano
:
A benchmark for comparison of cell tracking algorithms. Bioinform. 30(11): 1609-1617 (2014) - 2013
- [j4]Oleh Dzyubachyk
, Jorik Blaas, Charl P. Botha, Marius Staring
, Monique Reijnierse, Johan L. Bloem, Rob J. van der Geest
, Boudewijn P. F. Lelieveldt
:
Comparative exploration of whole-body MR through locally rigid transforms. Int. J. Comput. Assist. Radiol. Surg. 8(4): 635-647 (2013) - [c7]Oleh Dzyubachyk, Rob J. van der Geest
, Marius Staring
, Peter Börnert
, Monique Reijnierse, Johan L. Bloem, Boudewijn P. F. Lelieveldt
:
Joint Intensity Inhomogeneity Correction for Whole-Body MR Data. MICCAI (1) 2013: 106-113 - [c6]Oleh Dzyubachyk, Qian Tao, Dirk H. J. Poot, Hildo J. Lamb, Katja Zeppenfeld, Boudewijn P. F. Lelieveldt
, Rob J. van der Geest
:
Improved Myocardial Scar Characterization by Super-Resolution Reconstruction in Late Gadolinium Enhanced MRI. MICCAI (3) 2013: 147-154 - 2012
- [c5]Artem Khmelinskii, Esben Plenge, Peter Kok, Oleh Dzyubachyk, Dirk H. J. Poot, E. Suidgeest, Charl P. Botha, Wiro J. Niessen
, Louise van der Weerd
, Erik Meijering, Boudewijn P. F. Lelieveldt
:
Super-resolution reconstruction of whole-body MRI mouse data: An interactive approach. ISBI 2012: 1723-1726 - 2011
- [c4]Noemí Carranza-Herrezuelo
, Ihor Smal, Oleh Dzyubachyk, Wiro J. Niessen
, Erik Meijering:
Automated lineage tree reconstruction from Caenorhabditis elegans image data using particle filtering based cell tracking. ISBI 2011: 1921-1924 - 2010
- [j3]Oleh Dzyubachyk
, Jeroen Essers
, Wiggert A. van Cappellen, Céline Baldeyron
, Akiko Inagaki, Wiro J. Niessen
, Erik Meijering:
Automated analysis of time-lapse fluorescence microscopy images: from live cell images to intracellular foci. Bioinform. 26(19): 2424-2430 (2010) - [j2]Oleh Dzyubachyk
, Wiggert A. van Cappellen, Jeroen Essers
, Wiro J. Niessen
, Erik Meijering:
Advanced Level-Set-Based Cell Tracking in Time-Lapse Fluorescence Microscopy. IEEE Trans. Medical Imaging 29(3): 852-867 (2010) - [j1]Oleh Dzyubachyk, Wiggert A. van Cappellen, Jeroen Essers
, Wiro J. Niessen
, Erik Meijering:
Correction to "Advanced Level-Set-Based Cell Tracking in Time-Lapse Fluorescence Microscopy". IEEE Trans. Medical Imaging 29(6): 1331 (2010)
2000 – 2009
- 2009
- [c3]Oleh Dzyubachyk, Wiggert A. van Cappellen, Jeroen Essers
, Wiro J. Niessen
, Erik Meijering:
Energy Minimization Methods for Cell Motion Correction and Intracellular Analysis in Live-Cell Fluorescence Microscopy. ISBI 2009: 1127-1130 - 2008
- [c2]Oleh Dzyubachyk, Wiro J. Niessen
, Erik Meijering:
Advanced level-set based multiple-cell segmentation and tracking in time-lapse fluorescence microscopy images. ISBI 2008: 185-188 - 2007
- [c1]Oleh Dzyubachyk, Wiro J. Niessen
, Erik Meijering:
A Variational Model for Level-set Based Cell Tracking in Time-lapse Fluorescence Microscopy Images. ISBI 2007: 97-100
Coauthor Index
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