Exploring continual learning strategies in artificial neural networks through graph-based analysis of connectivity: Insights from a brain-inspired perspective. - Carboni, Lucrezia; Nwaigwe, Dwight; Mainsant, Marion; Bayle, Raphael; Reyboz, Marina; Mermillod, Martial; Dojat, Michel; Achard, Sophie (Neural Networks, 2025)

Cluster Globally, Reduce Locally: Scalable Efficient Dictionary Compression for Magnetic Resonance Fingerprinting. - Oudoumanessah, Geoffroy; Coudert, Thomas; Meyer, Luc; Delphin, Aurélien; Christen, Thomas; Dojat, Michel; Lartizien, Carole; Forbes, Florence (2025)

Active MRI Acquisition with Diffusion Guided Bayesian Experimental Design. - Iollo, Jacopo; Oudoumanessah, Geoffroy; Lartizien, Carole; Dojat, Michel; Forbes, Florence (CoRR, 2025)

Trustworthy clinical AI solutions: A unified review of uncertainty quantification in Deep Learning models for medical image analysis. - Lambert, Benjamin; Forbes, Florence; Doyle, Senan; Dehaene, Harmonie; Dojat, Michel (Artif. Intell. Medicine, 2024)

Graph-based methods coupled with specific distributional distances for adversarial attack detection. - Nwaigwe, Dwight; Carboni, Lucrezia; Mermillod, Martial; Achard, Sophie; Dojat, Michel (Neural Networks, 2024)

Robust Conformal Volume Estimation in 3D Medical Images. - Lambert, Benjamin; Forbes, Florence; Doyle, Senan; Dojat, Michel (2024)

Robust Conformal Volume Estimation in 3D Medical Images. - Lambert, Benjamin; Forbes, Florence; Doyle, Senan; Dojat, Michel (CoRR, 2024)

ImUnity: A generalizable VAE-GAN solution for multicenter MR image harmonization. - Cackowski, Stenzel; Barbier, Emmanuel Luc; Dojat, Michel; Christen, Thomas (Medical Image Anal., 2023)

Brain Subtle Anomaly Detection Based on Auto-Encoders Latent Space Analysis: Application To De Novo Parkinson Patients. - Pinon, Nicolas; Oudoumanessah, Geoffroy; Trombetta, Robin; Dojat, Michel; Forbes, Florence; Lartizien, Carole (2023)

TriadNet: Sampling-Free Predictive Intervals for Lesional Volume in 3D Brain MR Images. - Lambert, Benjamin; Forbes, Florence; Doyle, Senan; Dojat, Michel (2023)

Multi-layer Aggregation as a Key to Feature-Based OOD Detection. - Lambert, Benjamin; Forbes, Florence; Doyle, Senan; Dojat, Michel (2023)

Anisotropic Hybrid Networks for Liver Tumor Segmentation with Uncertainty Quantification. - Lambert, Benjamin; Roca, Pauline; Forbes, Florence; Doyle, Senan; Dojat, Michel (2023)

Towards Frugal Unsupervised Detection of Subtle Abnormalities in Medical Imaging. - Oudoumanessah, Geoffroy; Lartizien, Carole; Dojat, Michel; Forbes, Florence (2023)

Brain subtle anomaly detection based on auto-encoders latent space analysis : application to de novo parkinson patients. - Pinon, Nicolas; Oudoumanessah, Geoffroy; Trombetta, Robin; Dojat, Michel; Forbes, Florence; Lartizien, Carole (CoRR, 2023)

Graph-based methods coupled with specific distributional distances for adversarial attack detection. - Nwaigwe, Dwight; Carboni, Lucrezia; Mermillod, Martial; Achard, Sophie; Dojat, Michel (CoRR, 2023)

TriadNet: Sampling-free predictive intervals for lesional volume in 3D brain MR images. - Lambert, Benjamin; Forbes, Florence; Doyle, Senan; Dojat, Michel (CoRR, 2023)

Multi-layer Aggregation as a key to feature-based OOD detection. - Lambert, Benjamin; Forbes, Florence; Doyle, Senan; Dojat, Michel (CoRR, 2023)

Anisotropic Hybrid Networks for liver tumor segmentation with uncertainty quantification. - Lambert, Benjamin; Roca, Pauline; Forbes, Florence; Doyle, Senan; Dojat, Michel (CoRR, 2023)

Towards frugal unsupervised detection of subtle abnormalities in medical imaging. - Oudoumanessah, Geoffroy; Lartizien, Carole; Dojat, Michel; Forbes, Florence (CoRR, 2023)

Subtle anomaly detection: Application to brain MRI analysis of de novo Parkinsonian patients. - Ramírez, Verónica Muñoz; Kmetzsch, Virgilio; Forbes, Florence; Meoni, Sara; Moro, Elena; Dojat, Michel (Artif. Intell. Medicine, 2022)

Beyond Voxel Prediction Uncertainty: Identifying Brain Lesions You Can Trust. - Lambert, Benjamin; Forbes, Florence; Doyle, Senan; Tucholka, Alan; Dojat, Michel (2022)

Beyond Voxel Prediction Uncertainty: Identifying brain lesions you can trust. - Lambert, Benjamin; Forbes, Florence; Doyle, Senan; Tucholka, Alan; Dojat, Michel (CoRR, 2022)

Trustworthy clinical AI solutions: a unified review of uncertainty quantification in deep learning models for medical image analysis. - Lambert, Benjamin; Forbes, Florence; Tucholka, Alan; Doyle, Senan; Dehaene, Harmonie; Dojat, Michel (CoRR, 2022)

Improving Uncertainty-based Out-of-Distribution Detection for Medical Image Segmentation. - Lambert, Benjamin; Forbes, Florence; Doyle, Senan; Tucholka, Alan; Dojat, Michel (CoRR, 2022)

Editorial: APPNING: Animal Population Imaging. - Dojat, Michel; Bjaalie, Jan G.; Barbier, Emmanuel Luc (Frontiers Neuroinformatics, 2021)

Multiple sclerosis lesions segmentation from multiple experts: The MICCAI 2016 challenge dataset. - Commowick, Olivier; Kain, Michaël; Casey, Romain; Ameli, Roxana; Ferré, Jean-Christophe; Kerbrat, Anne; Tourdias, Thomas; Cervenansky, Frédéric; Camarasu-Pop, Sorina; Glatard, Tristan; Vukusic, Sandra; Edan, Gilles; et al. (NeuroImage, 2021)

Leveraging 3d Information In Unsupervised Brain Mri Segmentation. - Lambert, Benjamin; Louis, Maxime; Doyle, Senan; Forbes, Florence; Dojat, Michel; Tucholka, Alan (2021)

Network Embedding For Brain Connectivity. - Carboni, Lucrezia; Achard, Sophie; Dojat, Michel (2021)

Patch vs. Global Image-Based Unsupervised Anomaly Detection in MR Brain Scans of Early Parkinsonian Patients. - Ramírez, Verónica Muñoz; Pinon, Nicolas; Forbes, Florence; Lartizien, Carole; Dojat, Michel (2021)

Leveraging 3D Information in Unsupervised Brain MRI Segmentation. - Lambert, Benjamin; Louis, Maxime; Doyle, Senan; Forbes, Florence; Dojat, Michel; Tucholka, Alan (CoRR, 2021)

ImUnity: a generalizable VAE-GAN solution for multicenter MR image harmonization. - Cackowski, Stenzel; Barbier, Emmanuel Luc; Dojat, Michel; Christen, Thomas (CoRR, 2021)

Small Animal Shanoir (SAS) A Cloud-Based Solution for Managing Preclinical MR Brain Imaging Studies. - Kain, Michaël; Bodin, Marjolaine; Loury, Simon; Chi, Yao; Louis, Julien; Simon, Mathieu; Lamy, Julien; Barillot, Christian; Dojat, Michel (Frontiers Neuroinformatics, 2020)

A Multicenter Preclinical MRI Study: Definition of Rat Brain Relaxometry Reference Maps. - Deruelle, Tristan; Kober, Frank; Perles-Barbacaru, Adriana; Delzescaux, Thierry; Noblet, Vincent; Barbier, Emmanuel Luc; Dojat, Michel (Frontiers Neuroinformatics, 2020)

Deep Learning Models to Study the Early Stages of Parkinson's Disease. - Ramírez, Verónica Muñoz; Kmetzsch, Virgilio; Forbes, Florence; Dojat, Michel (2020)

Quantitative Mri Characterization of Brain Abnormalities in DE NOVO Parkinsonian Patients. - Ramírez, Verónica Muñoz; Forbes, Florence; Arbel, Julyan; Arnaud, Alexis; Dojat, Michel (2019)

No Structural Differences Are Revealed by VBM in 'De Novo' Parkinsonian Patients. - Ramírez, Verónica Muñoz; Forbes, Florence; Coupé, Pierrick; Dojat, Michel (2019)

Neural circuits for long-range color filling-in. - Gerardin, Peggy; Abbatecola, Clément; Devinck, Frédéric; Kennedy, Henry; Dojat, Michel; Knoblauch, Kenneth (NeuroImage, 2018)

Editorial: MAPPING: MAnagement and Processing of Images for Population ImagiNG. - Dojat, Michel; Kennedy, David N.; Niessen, Wiro J. (Frontiers ICT, 2017)

Traumatic Brain Lesion Quantification Based on Mean Diffusivity Changes. - Maggia, Christophe; Mistral, Thomas; Doyle, Senan; Forbes, Florence; Krainik, Alexandre; Galanaud, Damien; Schmitt, Emmanuelle; Kremer, Stéphane; Troprès, Irène; Barbier, Emmanuel Luc; Payen, Jean-François; Dojat, Michel (2017)

Sub-acute and Chronic Ischemic Stroke Lesion MRI Segmentation. - Doyle, Senan; Forbes, Florence; Jaillard, Assia; Heck, Olivier; Detante, Olivier; Dojat, Michel (2017)

PyHRF: A Python Library for the Analysis of fMRI Data Based on Local Estimation of the Hemodynamic Response Function. - Arias, Jaime; Ciuciu, Philippe; Dojat, Michel; Forbes, Florence; Frau-Pascual, Aina; Perret, Thomas; Warnking, Jan M. (2017)

Effects of aging on low luminance contrast processing in humans. - Bellot, Emmanuelle; Coizet, Véronique; Warnking, Jan; Knoblauch, Kenneth; Moro, Elena; Dojat, Michel (NeuroImage, 2016)

A Multilayer Ontology of Instruments for Neurological, Behavioral and Cognitive Assessments. - Batrancourt, Bénédicte; Dojat, Michel; Gibaud, Bernard; Kassel, Gilles (Neuroinformatics, 2015)

The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS). - Menze, Bjoern H.; Jakab, András; Bauer, Stefan; Kalpathy-Cramer, Jayashree; Farahani, Keyvan; Kirby, Justin S.; Burren, Yuliya; Porz, Nicole; Slotboom, Johannes; Wiest, Roland; Lanczi, Levente; Gerstner, Elizabeth R.; et al. (IEEE Trans. Medical Imaging, 2015)

Assessment of Tissue Injury in Severe Brain Trauma. - Maggia, Christophe; Doyle, Senan; Forbes, Florence; Heck, Olivier; Troprès, Irène; Berthet, Corentin; Teyssier, Yann; Velly, Lionel; Payen, Jean-François; Dojat, Michel (2015)

Retinotopic and Lateralized Processing of Spatial Frequencies in Human Visual Cortex during Scene Categorization. - Musel, Benoit; Bordier, Cécile; Dojat, Michel; Pichat, Cédric; Chokron, Sylvie; Bas, Jean-François Le; Peyrin, Carole (J. Cogn. Neurosci., 2013)

Fast Joint Detection-Estimation of Evoked Brain Activity in Event-Related fMRI Using a Variational Approach. - Chaâri, Lotfi; Vincent, Thomas; Forbes, Florence; Dojat, Michel; Ciuciu, Philippe (IEEE Trans. Medical Imaging, 2013)

Variational variable selection to assess experimental condition relevance in event-related fMRI. - Bakhous, Christine; Forbes, Florence; Vincent, Thomas; Dojat, Michel; Ciuciu, Philippe (2013)

A BOLD signature of eyeblinks in the visual cortex. - Hupé, Jean-Michel; Bordier, Cécile; Dojat, Michel (NeuroImage, 2012)

Which registration method for high resolution fMRI to explore hand movement cortical representation? - Pizzagalli, Fabrizio; Auzias, Guillaume; Delon-Martin, Chantal; Dojat, Michel (2012)

Adaptive experimental condition selection in event-related fMRI. - Bakhous, Christine; Forbes, Thomas; Vincent, Thomas; Chaâri, Lotfi; Dojat, Michel; Ciuciu, Philippe (2012)

Use of Pattern-Information Analysis in Vision Science: A Pragmatic Examination. - Ruiz, Mathieu J.; Hupé, Jean-Michel; Dojat, Michel (2012)

Combination of nonlinear registration methods with high resolution fMRI for a fine exploration of human primary motor hand area. - Pizzagalli, Fabrizio; Auzias, Guillaume; Delon-Martin, Chantal; Dojat, Michel (2011)

Two new stable anatomical landmarks on the Central Sulcus: Definition, automatic detection, and their relationship with primary motor functions of the hand. - Coulon, Olivier; Pizzagalli, Fabrizio; Operto, Grégory; Auzias, Guillaume; Delon-Martin, Chantal; Dojat, Michel (2011)

Variational Solution to the Joint Detection Estimation of Brain Activity in fMRI. - Chaâri, Lotfi; Forbes, Florence; Vincent, Thomas; Dojat, Michel; Ciuciu, Philippe (2011)

A core ontology of instruments used for neurological, behavioral and cognitive assessments. - Batrancourt, Bénédicte; Dojat, Michel; Gibaud, Bernard; Kassel, Gilles (2010)

Grid-wide neuroimaging data federation in the context of the NeuroLOG project. - Michel, Franck; Gaignard, Alban; Ahmad, Farooq; Barillot, Christian; Batrancourt, Bénédicte; Dojat, Michel; Gibaud, Bernard; Girard, Pascal; Godard, David; Kassel, Gilles; Lingrand, Diane; Malandain, Grégoire; et al. (2010)

Adaptive weighted fusion of multiple MR sequences for brain lesion segmentation. - Forbes, Florence; Doyle, Senan; García-Lorenzo, Daniel; Barillot, Christian; Dojat, Michel (2010)

A Weighted Multi-Sequence Markov Model For Brain Lesion Segmentation. - Forbes, Florence; Doyle, Senan; García-Lorenzo, Daniel; Barillot, Christian; Dojat, Michel (2010)

Agentification of Markov model-based segmentation: Application to magnetic resonance brain scans. - Scherrer, Benoit; Dojat, Michel; Forbes, Florence; Garbay, Catherine (Artif. Intell. Medicine, 2009)

Distributed Local MRF Models for Tissue and Structure Brain Segmentation. - Scherrer, Benoit; Forbes, Florence; Garbay, Catherine; Dojat, Michel (IEEE Trans. Medical Imaging, 2009)

A Conditional Random Field Approach for Coupling Local Registration with Robust Tissue and Structure Segmentation. - Scherrer, Benoit; Forbes, Florence; Dojat, Michel (2009)

Towards an ontology for sharing medical images and regions of interest in neuroimaging. - Temal, Lynda; Dojat, Michel; Kassel, Gilles; Gibaud, Bernard (J. Biomed. Informatics, 2008)

Segmentation of Magnetic Resonance Brain Images Using Edge and Region Cooperation Characterization of Stroke Lesions. - Cherfa, Yazid; Cherfa, Assia; Kabir, Yacine; Kassous, Sammyh; Jaillard, Assia; Dojat, Michel; Garbay, Catherine (Int. Arab J. Inf. Technol., 2007)

Knowledge construction from time series data using a collaborative exploration system. - Guyet, Thomas; Garbay, Catherine; Dojat, Michel (J. Biomed. Informatics, 2007)

Distributed Markovian segmentation: Application to MR brain scans. - Richard, Nathalie; Dojat, Michel; Garbay, Catherine (Pattern Recognit., 2007)

A Human-Machine Cooperative Approach for Time Series Data Interpretation. - Guyet, Thomas; Garbay, Catherine; Dojat, Michel (2007)

MRF Agent Based Segmentation: Application to MRI Brain Scans. - Scherrer, Benoit; Dojat, Michel; Forbes, Florence; Garbay, Catherine (2007)

LOCUS: LOcal Cooperative Unified Segmentation of MRI Brain Scans. - Scherrer, Benoit; Dojat, Michel; Forbes, Florence; Garbay, Catherine (2007)

Federating Distributed and Heterogeneous Information Sources in Neuroimaging: The NeuroBase Project. - Barillot, Christian; Benali, Habib; Dojat, Michel; Gaignard, Alban; Gibaud, Bernard; Kinkingnéhun, Serge; Matsumoto, Jean-Pierre; Pélégrini-Issac, Mélanie; Simon, Eric; Temal, Lynda (2006)

Artificial Intelligence in Medicine in Europe AIME'03. - Dojat, Michel; Keravnou, Elpida T. (Artif. Intell. Medicine, 2005)

Human/Computer Interaction to Learn Scenarios from ICU Multivariate Time Series. - Guyet, Thomas; Garbay, Catherine; Dojat, Michel (2005)

Apprentissage de scénarios à partir de séries temporelles multivariées. - Guyet, Thomas; Garbay, Catherine; Dojat, Michel (2005)

Partenariat utilisateur-SMA pour l'apprentissage à partir de séries temporelles : Application au monitoring en soins intensifs (article court). - Guyet, Thomas; Garbay, Catherine; Dojat, Michel (2005)

Artificial intelligence in neuroimaging: four challenges to improve interpretation of brain images. - Dojat, Michel (Artif. Intell. Medicine, 2004)

Automated segmentation of human brain MR images using a multi-agent approach. - Richard, Nathalie; Dojat, Michel; Garbay, Catherine (Artif. Intell. Medicine, 2004)

Statistical shape modeling of low level visual area borders. - Corouge, Isabelle; Dojat, Michel; Barillot, Christian (Medical Image Anal., 2004)

Sequence of pattern onset responses in the human visual areas: an fMRI constrained VEP source analysis. - Vanni, Simo; Warnking, Jan; Dojat, Michel; Delon-Martin, Chantal; Bullier, J.; Segebarth, Christoph (NeuroImage, 2004)

Timing of interactions across the visual field in the human cortex. - Vanni, Simo; Dojat, Michel; Warnking, Jan; Delon-Martin, Chantal; Segebarth, Christoph; Bullier, J. (NeuroImage, 2004)

SmartCareTM-Automated Clinical Guidelines in Critical Care. - Mersmann, Stefan; Dojat, Michel (2004)

Multi-agent Approach for Image Processing: A Case Study for MRI Human Brain Scans Interpretation. - Richard, Nathalie; Dojat, Michel; Garbay, Catherine (2003)

Rôle des données, informations et connaissances dans la construction de scénarios médicaux. - Silvent, Anne-Sophie; Garbay, Catherine; Carry, Pierre-Yves; Dojat, Michel (2003)

Statistical Shape Modeling of Unfolded Retinotopic Maps for a Visual Areas Probabilistic Atlas. - Corouge, Isabelle; Dojat, Michel; Barillot, Christian (2003)

Artificial Intelligence in Medicine, 9th Conference on Artificial Intelligence in Medicine in Europe, AIME 2003, Protaras, Cyprus, October 18-22, 2003, Proceedings (Springer, 2003)

fMRI Retinotopic Mapping - Step by Step. - Warnking, Jan; Dojat, Michel; Guérin-Dugué, Anne; Delon-Martin, Chantal; Olympieff, S.; Richard, Nathalie; Chéhikian, Alain; Segebarth, Christoph (NeuroImage, 2002)

Situated Cooperative Agents: a Powerful Paradigm for MRI Brain Scans Segmentation. - Richard, Nathalie; Dojat, Michel; Garbay, Catherine (2002)

Application of Information Technology: A UMLS-based Knowledge Acquisition Tool for Rule-based Clinical Decision Support System Development. - Achour, Soumeya; Dojat, Michel; Rieux, Claire; Bierling, Philippe; Lepage, Eric (J. Am. Medical Informatics Assoc., 2001)

Dynamic Adaptation of Cooperative Agents for MRI Brain Scans Segmentation. - Richard, Nathalie; Dojat, Michel; Garbay, Catherine (2001)

Knowledge-based information management in intensive care and anesthesia. - Dojat, Michel; Miksch, Silvia; Hunter, Jim (Artif. Intell. Medicine, 2000)

A cooperative framework for segmentation of MRI brain scans. - Germond, Laurence; Dojat, Michel; Taylor, Christopher J.; Garbay, Catherine (Artif. Intell. Medicine, 2000)

The Use of the UMLS Knowledge Sources for the Design of a Domain Specific Ontology: A Practical Experience in Blood Transfusion. - Achour, Soumeya; Dojat, Michel; Brethon, Jean-Marc; Blain, Gil; Lepage, Eric (1999)

A Multi-agent System for MRI Brain Segmentation. - Germond, Laurence; Dojat, Michel; Taylor, Christopher J.; Garbay, Catherine (1999)

Using UMLS Knowledge Sources for Designing a Domain Specific Ontology. - Achour, Soumeya; Dojat, Michel; Brethon, Jean-Marc; Blain, Gil; Lepage, Eric (1999)

Knowledge acquisition environment for the design of a decision support system: application in blood transfusion. - Achour, Soumeya; Dojat, Michel; Rieux, Claire; Bierling, Philippe; Lepage, Eric (1999)

Scenario recognition for temporal reasoning in medical domains. - Dojat, Michel; Ramaux, Nicolas; Fontaine, Dominique (Artif. Intell. Medicine, 1998)

NéoGanesh: a working system for the automated control of assisted ventilation in ICUs. - Dojat, Michel; Pachet, François; Guessoum, Zahia; Touchard, D.; Harf, A.; Brochard, L. (Artif. Intell. Medicine, 1997)

Using a general theory of time and change in patient monitoring: Experiment and evaluation. - Chittaro, Luca; Dojat, Michel (Comput. Biol. Medicine, 1997)

Temporal Scenario Recognition for Intelligent Patient Monitoring. - Ramaux, Nicolas; Fontaine, Dominique; Dojat, Michel (1997)

Realistic Model for Temporal Reasoning in Real-Time Patient Monitoring. - Dojat, Michel (Appl. Artif. Intell., 1996)

A Real-Time Agent Model in an Asynchronous-Object Environment. - Guessoum, Zahia; Dojat, Michel (1996)

Modeling Medical Reasoning with the Event Calculus: An Application to the Management of Mechanical Ventilation. - Chittaro, Luca; Rosso, Marco Del; Dojat, Michel (1995)

Representing Medical Context Using Rule-Based Object-Oriented Programming Techniques. - Dojat, Michel; Pachet, François (1995)

Temporal Reasoning in a Medical Expertise. - Dojat, Michel; Sayettat, Claudette (1993)

Representation of a Medical Expertise using the Smalltalk Environment: Putting a Prototype to Work. - Dojat, Michel; Pachet, François (1992)