From affinity selection to kinetic selection in Germinal Centre modelling - Danial Lashgari; Elena Merino Tejero; Michael Meyer-Hermann; Mathieu A. F. Claireaux; Marit J. van Gils; Huub C. J. Hoefsloot; Antoine H. C. van Kampen (PLoS Comput. Biol., 2022)

compendiumdb: an R package for retrieval and storage of functional genomics data - Umesh K. Nandal; Antoine H. C. van Kampen; Perry D. Moerland (Bioinform., 2016)

Candidate prioritization for low-abundant differentially expressed proteins in 2D-DIGE datasets - Umesh K. Nandal; Wytze J. Vlietstra; Carsten Byrman; Rienk E. Jeeninga; Jeffrey H. Ringrose; Antoine H. C. van Kampen; Dave Speijer; Perry D. Moerland (BMC Bioinform., 2015)

Using Petri nets for experimental design in a multi-organ elimination pathway - Polina Reshetova; Age K. Smilde; Johan A. Westerhuis; Antoine H. C. van Kampen (Comput. Biol. Medicine, 2015)

A data-centric neuroscience gateway: design, implementation, and experiences - Shayan Shahand; Ammar Benabdelkader; Mohammad Mahdi Jaghoori; Mostapha al Mourabit; Jordi Huguet; Matthan W. A. Caan; Antoine H. C. van Kampen; Sílvia Delgado Olabarriaga (Concurr. Comput. Pract. Exp., 2015)

Science Gateway Canvas: A business reference model for Science Gateways - Shayan Shahand; Antoine H. C. van Kampen; Sílvia Delgado Olabarriaga (Proceedings of the 1st Workshop on The Science of Cyberinfrastructure - Research, Experience, Applications and Models, SCREAM@HPDC 2015, Portland, Oregon, USA, June 16, 2015, 2015)

PROV-man: A PROV-compliant toolkit for provenance management - Ammar Benabdelkader; Antoine H. C. van Kampen; Sílvia D. Olabarriaga (PeerJ Prepr., 2015)

Knowledge representation in metabolic pathway databases - Miranda D. Stobbe; Gerbert A. Jansen; Perry D. Moerland; Antoine H. C. van Kampen (Briefings Bioinform., 2014)

Use of prior knowledge for the analysis of high-throughput transcriptomics and metabolomics data - Polina Reshetova; Age K. Smilde; Antoine H. C. van Kampen; Johan A. Westerhuis (BMC Syst. Biol., 2014)

Computational Neuroscience Gateway: A Science Gateway Based on the WS-PGRADE/gUSE - Shayan Shahand; Mohammad Mahdi Jaghoori; Ammar Benabdelkader; Juan Luis Font-Calvo; Jordi Huguet; Matthan W. A. Caan; Antoine H. C. van Kampen; Sílvia D. Olabarriaga (Science Gateways for Distributed Computing Infrastructures, Development Framework and Exploitation by Scientific User Communities, 2014)

Consensus and conflict cards for metabolic pathway databases - Miranda D. Stobbe; Morris A. Swertz; Ines Thiele; Trebor Rengaw; Antoine H. C. van Kampen; Perry D. Moerland (BMC Syst. Biol., 2013)

Characterizing workflow-based activity on a production e-infrastructure using provenance data - Souley Madougou; Shayan Shahand; Mark Santcroos; Barbera D. C. van Schaik; Ammar Benabdelkader; Antoine H. C. van Kampen; Sílvia Delgado Olabarriaga (Future Gener. Comput. Syst., 2013)

e-Bioscience Solutions and Challenges for Next Generation Sequencing Experiments - Barbera D. C. van Schaik; Mark Santcroos; Souley Madougou; Aldo Jongejan; Antoine H. C. van Kampen; Sílvia Delgado Olabarriaga (International Work-Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2013, Granada, Spain, March 18-20, 2013. Proceedings, 2013)

A Data-Centric Science Gateway for Computational Neuroscience - Shayan Shahand; Ammar Benabdelkader; Jordi Huguet; Mohammad Mahdi Jaghoori; Mark Santcroos; Mostapha al Mourabit; Paul F. C. Groot; Matthan W. A. Caan; Antoine H. C. van Kampen; Sílvia D. Olabarriaga (Proceedings of the 5th International Workshop on Science Gateways, Zurich, Switzerland, 3-5 June, 2013, 2013)

Understanding workflows for distributed computing: nitty-gritty details - Sílvia Delgado Olabarriaga; Mohammad Mahdi Jaghoori; Vladimir Korkhov; Barbera D. C. van Schaik; Antoine H. C. van Kampen (Proceedings of WORKS 2013: 8th Workshop On Workflows in Support of Large-Scale Science, Held in conjunction with SC13, Denver, CO, USA, November 17, 2013, 2013)

Evolution of grid-based services for Diffusion Tensor Image analysis - Matthan W. A. Caan; Shayan Shahand; Frans M. Vos; Antoine H. C. van Kampen; Sílvia D. Olabarriaga (Future Gener. Comput. Syst., 2012)

A Grid-Enabled Gateway for Biomedical Data Analysis - Shayan Shahand; Mark Santcroos; Antoine H. C. van Kampen; Sílvia Delgado Olabarriaga (J. Grid Comput., 2012)

Legal constraints on genetic data processing in European grids - Evert Mouw; Guido van 't Noordende; Antoine H. C. van Kampen; Baas Louter; Mark Santcroos; Sílvia D. Olabarriaga (HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences, Proceedings of HealthGrid 2012, Amsterdam, The Netherlands, 21-23 May 2012, 2012)

Provenance for distributed biomedical workflow execution - Souley Madougou; Mark Santcroos; Ammar Benabdelkader; Barbera D. C. van Schaik; Shayan Shahand; Vladimir Korkhov; Antoine H. C. van Kampen; Sílvia D. Olabarriaga (HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences, Proceedings of HealthGrid 2012, Amsterdam, The Netherlands, 21-23 May 2012, 2012)

Integrated Support for Neuroscience Research: from Study Design to Publication - Shayan Shahand; Matthan W. A. Caan; Antoine H. C. van Kampen; Sílvia D. Olabarriaga (HealthGrid Applications and Technologies Meet Science Gateways for Life Sciences, Proceedings of HealthGrid 2012, Amsterdam, The Netherlands, 21-23 May 2012, 2012)

Critical assessment of human metabolic pathway databases: a stepping stone for future integration - Miranda D. Stobbe; Sander M. Houten; Gerbert A. Jansen; Antoine H. C. van Kampen; Perry D. Moerland (BMC Syst. Biol., 2011)

A Provenance Approach to Trace Scientific Experiments on a Grid Infrastructure - Ammar Benabdelkader; Mark Santcroos; Souley Madougou; Antoine H. C. van Kampen; Sílvia D. Olabarriaga (IEEE 7th International Conference on E-Science, e-Science 2011, Stockholm, Sweden, December 5-8, 2011, 2011)

Data Decomposition in Biomedical e-Science Applications - Yassene Mohammed; Shayan Shahand; Vladimir Korkhov; Angela C. M. Luyf; Barbera D. C. van Schaik; Matthan W. A. Caan; Antoine H. C. van Kampen; Magnus Palmblad; Sílvia D. Olabarriaga (IEEE 7th International Conference on E-Science, e-Science 2011, Workshop Proceedings, Stockholm, Sweden, December 5-8, 2011, 2011)

Initial steps towards a production platform for DNA sequence analysis on the grid - Angela C. M. Luyf; Barbera D. C. van Schaik; Michel de Vries; Frank Baas; Antoine H. C. van Kampen; Sílvia D. Olabarriaga (BMC Bioinform., 2010)

Gridifying a Diffusion Tensor Imaging Analysis Pipeline - Matthan W. A. Caan; Frans M. Vos; Antoine H. C. van Kampen; Sílvia D. Olabarriaga; Lucas J. van Vliet (10th IEEE/ACM International Conference on Cluster, Cloud and Grid Computing, CCGrid 2010, 17-20 May 2010, Melbourne, Victoria, Australia, 2010)

Hitting the ground running: Healthgrid deployment and adoption - Femida Gwadry-Sridhar; Sílvia Delgado Olabarriaga; Antoine H. C. van Kampen; Michael Bauer; Tony Solomonides (Healthgrid Applications and Core Technologies - Proceedings of HealthGrid 2010, University Paris XI, Orsay, Paris, France, June 28-30, 2010, 2010)

Organization and integration of biomedical knowledge with concept maps for key peroxisomal pathways - A. M. Willemsen; Gerbert A. Jansen; J. C. Komen; S. van Hooff; H. R. Waterham; P. M. T. Brites; Ronald J. A. Wanders; Antoine H. C. van Kampen (ECCB'08 Proceedings, Seventh European Conference on Computational Biology, 22-26 September 2008, Cagliari, Italy, 2008)

delta rho-Web, an online tool to assess composition similarity of individual nucleic acid sequences - M. W. J. van Passel; Angela C. M. Luyf; Antoine H. C. van Kampen; Aldert Bart; A. van der Ende (Bioinform., 2005)

Visualizing metabolic activity on a genome-wide scale - Angela C. M. Luyf; J. de Gast; Antoine H. C. van Kampen (Bioinform., 2002)

USAGE: a web-based approach towards the analysis of SAGE data - Antoine H. C. van Kampen; Barbera D. C. van Schaik; Erwin Pauws; E. M. C. Michiels; J. M. Ruijter; H. N. Caron; Rogier Versteeg; S. H. Heisterkamp; Jack A. M. Leunissen; Frank Baas; M. van der Mee (Bioinform., 2000)

Reinvestigation of a Genetic-based Classifier System: The Effectiveness of Recombination - Antoine H. C. van Kampen; Lutgarde M. C. Buydens (Comput. Chem., 1997)

A Comparative Study of the DG-OMEGA (DG), DGII, and GAT Method for the Structure Elucidation of a Methylene-acetal Linked Thymine Dinucleotide - Antoine H. C. van Kampen; Mischa L. M. Beckers; Lutgarde M. C. Buydens (Comput. Chem., 1997)