Fast zero-inflated negative binomial mixed modeling approach for analyzing longitudinal metagenomics data - Xinyan Zhang; Nengjun Yi (Bioinform., 2020)

NBZIMM: negative binomial and zero-inflated mixed models, with application to microbiome/metagenomics data analysis - Xinyan Zhang; Nengjun Yi (BMC Bioinform., 2020)

BhGLM: Bayesian hierarchical GLMs and survival models, with applications to genomics and epidemiology - Nengjun Yi; Zaixiang Tang; Xinyan Zhang; Boyi Guo (Bioinform., 2019)

Gsslasso Cox: a Bayesian hierarchical model for predicting survival and detecting associated genes by incorporating pathway information - Zaixiang Tang; Shufeng Lei; Xinyan Zhang; Zixuan Yi; Boyi Guo; Jake Y. Chen; Yueping Shen; Nengjun Yi (BMC Bioinform., 2019)

Group spike-and-slab lasso generalized linear models for disease prediction and associated genes detection by incorporating pathway information - Zaixiang Tang; Yueping Shen; Yan Li; Xinyan Zhang; Jia Wen; Chen'ao Qian; Wenzhuo Zhuang; Xinghua Shi; Nengjun Yi (Bioinform., 2018)

Pathway-structured predictive modeling for multi-level drug response in multiple myeloma - Xinyan Zhang; Bingzong Li; Huiying Han; Sha Song; Hongxia Xu; Zixuan Yi; Yating Hong; Wenzhuo Zhuang; Nengjun Yi (Bioinform., 2018)

The spike-and-slab lasso Cox model for survival prediction and associated genes detection - Zaixiang Tang; Yueping Shen; Xinyan Zhang; Nengjun Yi (Bioinform., 2017)

Negative binomial mixed models for analyzing microbiome count data - Xinyan Zhang; Himel Mallick; Zaixiang Tang; Lei Zhang; Xiangqin Cui; Andrew K. Benson; Nengjun Yi (BMC Bioinform., 2017)

Bayesian group bridge for bi-level variable selection - Himel Mallick; Nengjun Yi (Comput. Stat. Data Anal., 2017)

Deviance information criterion (DIC) in Bayesian multiple QTL mapping - Daniel Shriner; Nengjun Yi (Comput. Stat. Data Anal., 2009)

R/qtlbim: QTL with Bayesian Interval Mapping in experimental crosses - Brian S. Yandell; Tapan Mehta; Samprit Banerjee; Daniel Shriner; Ramprasad Venkataraman; Jee Young Moon; W. Whipple Neely; Hao Wu; Randy von Smith; Nengjun Yi (Bioinform., 2007)