Prioritizing genes for systematic variant effect mapping - Da Kuang; Rebecca Truty; Jochen Weile; Britt Johnson; Keith Nykamp; Carlos Araya; Robert L. Nussbaum; Frederick P. Roth (Bioinform., 2021)

MaveRegistry: a collaboration platform for multiplexed assays of variant effect - Da Kuang; Jochen Weile; Nishka Kishore; Maria Nguyen; Alan F. Rubin; Stanley Fields; Douglas M. Fowler; Frederick P. Roth (Bioinform., 2021)

MaveQuest: a web resource for planning experimental tests of human variant effects - Da Kuang; Jochen Weile; Roujia Li; Tom W. Ouellette; Jarry A. Barber; Frederick P. Roth (Bioinform., 2020)

A reference map of the human binary protein interactome - Katja Luck; Dae-Kyum Kim; Luke Lambourne; Kerstin Spirohn; Bridget E. Begg; Wenting Bian; Ruth Brignall; Tiziana Cafarelli; Francisco J. Campos-Laborie; Benoît Charloteaux; Dong-Sic Choi; Atina G. Coté; et al. (Nat., 2020)

A web application and service for imputing and visualizing missense variant effect maps - Yingzhou Wu; Jochen Weile; Atina G. Coté; Song Sun; Jennifer J. Knapp; Marta Verby; Frederick P. Roth (Bioinform., 2019)

Bayesian integration of networks without gold standards - Jochen Weile; Katherine James; Jennifer Hallinan; Simon J. Cockell; Phillip W. Lord; Anil Wipat; Darren J. Wilkinson (Bioinform., 2012)

Customizable views on semantically integrated networks for systems biology - Jochen Weile; Matthew R. Pocock; Simon J. Cockell; Phillip W. Lord; James M. Dewar; Eva-Maria Holstein; Darren J. Wilkinson; David A. Lydall; Jennifer Hallinan; Anil Wipat (Bioinform., 2011)

KeyPathwayMiner: Detecting Case-Specific Biological Pathways Using Expression Data - Nicolas Alcaraz; Hande Kücük; Jochen Weile; Anil Wipat; Jan Baumbach (Internet Math., 2011)

An integrated dataset for in silico drug discovery - Simon J. Cockell; Jochen Weile; Phillip W. Lord; Claire Wipat; Dmytro Andriychenko; Matthew R. Pocock; Darren J. Wilkinson; Malcolm Young; Anil Wipat (J. Integr. Bioinform., 2010)

Linking Life Sciences Data Using Graph-Based Mapping - Jan Taubert; Matthew Hindle; Artem Lysenko; Jochen Weile; Jacob Köhler; Christopher J. Rawlings (Data Integration in the Life Sciences, 6th International Workshop, DILS 2009, Manchester, UK, July 20-22, 2009. Proceedings, 2009)

MoRAine - A web server for fast computational transcription factor binding motif re-annotation - Jan Baumbach; Tobias Wittkop; Jochen Weile; Thomas Kohl; Sven Rahmann (J. Integr. Bioinform., 2008)

CoryneCenter - An online resource for the integrated analysis of corynebacterial genome and transcriptome data - Heiko Neuweger; Jan Baumbach; Stefan P. Albaum; Thomas Bekel; Michael Dondrup; Andrea T. Hüser; Jörn Kalinowski; Sebastian Oehm; Alfred Pühler; Sven Rahmann; Jochen Weile; Alexander Goesmann (BMC Syst. Biol., 2007)