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ORCIDKirk Roberts
- > Home > Persons > Kirk Roberts
Publications
- 2024
[e4]Dina Demner-Fushman, Sophia Ananiadou, Makoto Miwa, Kirk Roberts, Junichi Tsujii:
Proceedings of the 23rd Workshop on Biomedical Natural Language Processing, BioNLP@ACL 2024, Bangkok, Thailand, August 16, 2024. Association for Computational Linguistics 2024, ISBN 979-8-89176-130-8 [contents]- [i24]Deepak Gupta, Dina Demner-Fushman, William R. Hersh, Steven Bedrick, Kirk Roberts:
Overview of TREC 2024 Biomedical Generative Retrieval (BioGen) Track. CoRR abs/2411.18069 (2024) - 2022
- [c71]Kirk Roberts, Dina Demner-Fushman, Ellen M. Voorhees, Steven Bedrick, William R. Hersh:
Overview of the TREC 2022 Clinical Trials Track. TREC 2022 - 2021
- [j26]Kirk Roberts, Tasmeer Alam, Steven Bedrick, Dina Demner-Fushman, Kyle Lo, Ian Soboroff, Ellen M. Voorhees, Lucy Lu Wang
, William R. Hersh:
Searching for scientific evidence in a pandemic: An overview of TREC-COVID. J. Biomed. Informatics 121: 103865 (2021) - [i14]Kirk Roberts, Tasmeer Alam, Steven Bedrick, Dina Demner-Fushman, Kyle Lo, Ian Soboroff, Ellen M. Voorhees, Lucy Lu Wang, William R. Hersh:
Searching for Scientific Evidence in a Pandemic: An Overview of TREC-COVID. CoRR abs/2104.09632 (2021) - 2020
- [j21]Kirk Roberts, Tasmeer Alam, Steven Bedrick, Dina Demner-Fushman, Kyle Lo, Ian Soboroff, Ellen M. Voorhees, Lucy Lu Wang, William R. Hersh:
TREC-COVID: rationale and structure of an information retrieval shared task for COVID-19. J. Am. Medical Informatics Assoc. 27(9): 1431-1436 (2020) - [j19]Surabhi Datta, Yuqi Si, Laritza Rodriguez, Sonya E. Shooshan, Dina Demner-Fushman, Kirk Roberts:
Understanding spatial language in radiology: Representation framework, annotation, and spatial relation extraction from chest X-ray reports using deep learning. J. Biomed. Informatics 108: 103473 (2020) - [j17]Ellen M. Voorhees, Tasmeer Alam, Steven Bedrick, Dina Demner-Fushman, William R. Hersh, Kyle Lo, Kirk Roberts, Ian Soboroff, Lucy Lu Wang:
TREC-COVID: constructing a pandemic information retrieval test collection. SIGIR Forum 54(1): 1:1-1:12 (2020) - [c59]Kirk Roberts, Dina Demner-Fushman, Ellen M. Voorhees, Steven Bedrick, William R. Hersh:
Overview of the TREC 2020 Precision Medicine Track. TREC 2020 - [i12]Ellen M. Voorhees, Tasmeer Alam, Steven Bedrick, Dina Demner-Fushman, William R. Hersh, Kyle Lo, Kirk Roberts, Ian Soboroff, Lucy Lu Wang:
TREC-COVID: Constructing a Pandemic Information Retrieval Test Collection. CoRR abs/2005.04474 (2020) - 2019
- [c48]Kirk Roberts, Dina Demner-Fushman, Ellen M. Voorhees, William R. Hersh, Steven Bedrick, Alexander J. Lazar, Shubham Pant, Funda Meric-Bernstam:
Overview of the TREC 2019 Precision Medicine Track. TREC 2019 - [i3]Surabhi Datta, Yuqi Si, Laritza Rodriguez, Sonya E. Shooshan, Dina Demner-Fushman, Kirk Roberts:
Understanding Spatial Language in Radiology: Representation Framework, Annotation, and Spatial Relation Extraction from Chest X-ray Reports using Deep Learning. CoRR abs/1908.04485 (2019) - 2018
- [c47]Dina Demner-Fushman, Joseph M. Tonning, Kin Wah Fung, Phong Do, Richard D. Boyce, Kirk Roberts:
Adverse Reactions and Drug-Drug Interaction Extraction tracks at the Text Analysis Conference (TAC). AMIA 2018 - [c46]Kirk Roberts, Dina Demner-Fushman, Ellen M. Voorhees, William R. Hersh, Steven Bedrick, Alexander J. Lazar, Shubham Pant:
Benchmarking Information Retrieval for Precision Oncology: the TREC Precision Medicine Track. AMIA 2018 - [c43]Kirk Roberts, Dina Demner-Fushman, Ellen M. Voorhees, William R. Hersh, Steven Bedrick, Alexander J. Lazar:
Overview of the TREC 2018 Precision Medicine Track. TREC 2018 - 2017
- [j12]Trevor Cohen, Kirk Roberts, Anupama E. Gururaj, Xiaoling Chen, Saeid Pournejati, George Alter, William R. Hersh, Dina Demner-Fushman, Lucila Ohno-Machado, Hua Xu:
A publicly available benchmark for biomedical dataset retrieval: the reference standard for the 2016 bioCADDIE dataset retrieval challenge. Database J. Biol. Databases Curation 2017: bax061 (2017) - [j11]Kirk Roberts, Anupama E. Gururaj, Xiaoling Chen, Saeid Pournejati, William R. Hersh, Dina Demner-Fushman, Lucila Ohno-Machado, Trevor Cohen, Hua Xu:
Information retrieval for biomedical datasets: the 2016 bioCADDIE dataset retrieval challenge. Database J. Biol. Databases Curation 2017: bax068 (2017) - [j9]Ariel Deardorff, Kate Masterton, Kirk Roberts, Halil Kilicoglu, Dina Demner-Fushman:
A protocol-driven approach to automatically finding authoritative answers to consumer health questions in online resources. J. Assoc. Inf. Sci. Technol. 68(7): 1724-1736 (2017) - [c41]Kirk Roberts, Anupama E. Gururaj, Xiaoling Chen, Saeid Pournejati, Trevor Cohen, William R. Hersh, Dina Demner-Fushman, Lucila Ohno-Machado, Hua Xu:
Information Retrieval for Biomedical Datasets: The 2016 bioCADDIE Challenge. AMIA 2017 - [c35]Kirk Roberts, Dina Demner-Fushman, Ellen M. Voorhees, William R. Hersh, Steven Bedrick, Alexander J. Lazar, Shubham Pant:
Overview of the TREC 2017 Precision Medicine Track. TREC 2017 - [i2]Kirk Roberts, Dina Demner-Fushman, Joseph M. Tonning:
Overview of the TAC 2017 Adverse Reaction Extraction from Drug Labels Track. TAC 2017 - 2016
- [j8]Kirk Roberts, Matthew S. Simpson, Dina Demner-Fushman, Ellen M. Voorhees, William R. Hersh:
State-of-the-art in biomedical literature retrieval for clinical cases: a survey of the TREC 2014 CDS track. Inf. Retr. J. 19(1-2): 113-148 (2016) - [j7]Kirk Roberts, Dina Demner-Fushman:
Interactive use of online health resources: a comparison of consumer and professional questions. J. Am. Medical Informatics Assoc. 23(4): 802-811 (2016) - [c33]Yassine Mrabet, Halil Kilicoglu, Kirk Roberts, Dina Demner-Fushman:
Combining Open-domain and Biomedical Knowledge for Topic Recognition in Consumer Health Questions. AMIA 2016 - [c32]Kirk Roberts, Laritza M. Rodriguez, Sonya E. Shooshan, Dina Demner-Fushman:
Resource Classification for Medical Questions. AMIA 2016 - [c31]Hoo-Chang Shin, Kirk Roberts, Le Lu, Dina Demner-Fushman, Jianhua Yao, Ronald M. Summers:
Learning to Read Chest X-Rays: Recurrent Neural Cascade Model for Automated Image Annotation. CVPR 2016: 2497-2506 - [c30]Halil Kilicoglu, Asma Ben Abacha, Yassine Mrabet, Kirk Roberts, Laritza Rodriguez, Sonya E. Shooshan, Dina Demner-Fushman:
Annotating Named Entities in Consumer Health Questions. LREC 2016 - [c29]Kirk Roberts, Dina Demner-Fushman:
Annotating Logical Forms for EHR Questions. LREC 2016 - [c28]Kirk Roberts, Dina Demner-Fushman, Ellen M. Voorhees, William R. Hersh:
Overview of the TREC 2016 Clinical Decision Support Track. TREC 2016 - [i1]Hoo-Chang Shin, Kirk Roberts, Le Lu, Dina Demner-Fushman, Jianhua Yao, Ronald M. Summers:
Learning to Read Chest X-Rays: Recurrent Neural Cascade Model for Automated Image Annotation. CoRR abs/1603.08486 (2016) - 2015
- [j6]Kirk Roberts, Sonya E. Shooshan, Laritza Rodriguez, Swapna Abhyankar, Halil Kilicoglu, Dina Demner-Fushman:
The role of fine-grained annotations in supervised recognition of risk factors for heart disease from EHRs. J. Biomed. Informatics 58: S111-S119 (2015) - [c27]Halil Kilicoglu, Marcelo Fiszman, Kirk Roberts, Dina Demner-Fushman:
An Ensemble Method for Spelling Correction in Consumer Health Questions. AMIA 2015 - [c26]Kirk Roberts, Laritza Rodriguez, Sonya E. Shooshan, Dina Demner-Fushman:
Automatic Extraction and Post-coordination of Spatial Relations in Consumer Language. AMIA 2015 - 2014
- [c24]Kirk Roberts, Amos Cahan, Dina Demner-Fushman:
Error Propagation in EHRs via Copy/Paste: An Analysis of Relative Dates. AMIA 2014 - [c23]Kirk Roberts, Halil Kilicoglu, Marcelo Fiszman, Dina Demner-Fushman:
Automatically Classifying Question Types for Consumer Health Questions. AMIA 2014 - [c22]Kirk Roberts, Halil Kilicoglu, Marcelo Fiszman, Dina Demner-Fushman:
Decomposing Consumer Health Questions. BioNLP@ACL 2014: 29-37 - [c20]Kirk Roberts, Kate Masterton, Marcelo Fiszman, Halil Kilicoglu, Dina Demner-Fushman:
Annotating Question Decomposition on Complex Medical Questions. LREC 2014: 2598-2602
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