A deep generative model of 3D single-cell organization. - Donovan-Maiye, Rory M.; Brown, Eva Maxfield; Chan, K. Caleb; Ding, Liya; Yan, Calysta; Gaudreault, Nathalie; Theriot, Julie A.; Maleckar, Mary M.; Knijnenburg, Theo A.; Johnson, Gregory R. (PLoS Comput. Biol., 2022)

Analysis of Surface Protein Expression Reveals the Growth Pattern of the Gram-Negative Outer Membrane. - Ursell, Tristan; Trepagnier, Eliane H.; Huang, Kerwyn Casey; Theriot, Julie A. (PLoS Comput. Biol., 2012)

Reduced amino acid alphabets exhibit an improved sensitivity and selectivity in fold assignment. - Peterson, Eric L.; Kondev, Jané; Theriot, Julie A.; Phillips, Rob (Bioinform., 2009)

Decomposing non-rigid cell motion via kinematic skeletonization. - Wilson, Cyrus A.; Theriot, Julie A. (2007)

A Correlation-Based Approach to Calculate Rotation and Translation of Moving Cells. - Wilson, Cyrus A.; Theriot, Julie A. (IEEE Trans. Image Process., 2006)