The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS) - Bjoern H. Menze; András Jakab; Stefan Bauer; Jayashree Kalpathy-Cramer; Keyvan Farahani; Justin S. Kirby; Yuliya Burren; Nicole Porz; Johannes Slotboom; Roland Wiest; Levente Lanczi; Elizabeth R. Gerstner; et al. (IEEE Trans. Medical Imaging, 2015)

Cancer Data Integration and Querying with GeneTegra - E. Patrick Shironoshita; Yves R. Jean-Mary; Ray M. Bradley; Patricia Buendia; Mansur R. Kabuka (Data Integration in the Life Sciences - 8th International Conference, DILS 2012, College Park, MD, USA, June 28-29, 2012. Proceedings, 2012)

From ESTs to ESRs: Comparative analysis of mutually exclusive exons in 15 species of insects - Patricia Buendia; Shu-Ning Hsu; Akira Chiba; John Tyree; Robert Loredo (IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2011, Orlando, FL, USA, February 3-5, 2011, 2011)

A phylogenetic and Markov model approach for the reconstruction of mutational pathways of drug resistance - Patricia Buendia; Brice Cadwallader; Victor DeGruttola (Bioinform., 2009)

Serial evolutionary networks of within-patient HIV-1 sequences reveal patterns of evolution of X4 strains - Patricia Buendia; Giri Narasimhan (BMC Syst. Biol., 2009)

The role of internal node sequences and the molecular clock in the analysis of serially-sampled data - Patricia Buendia; Timothy M. Collins; Giri Narasimhan (Int. J. Bioinform. Res. Appl., 2008)

Sliding MinPD: building evolutionary networks of serial samples via an automated recombination detection approach - Patricia Buendia; Giri Narasimhan (Bioinform., 2007)

Reconstructing Mutational Pathways from Serial Evolutionary Trees - Patricia Buendia (Proceedings of the 7th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2007, October 14-17, 2007, Harvard Medical School, Boston, MA, USA, 2007)

Searching for Recombinant Donors in a Phylogenetic Network of Serial Samples - Patricia Buendia; Giri Narasimhan (Bioinformatics Research and Applications, Third International Symposium, ISBRA 2007, Atlanta, GA, USA, May 7-10, 2007, Proceedings, 2007)

Serial NetEvolve: a flexible utility for generating serially-sampled sequences along a tree or recombinant network - Patricia Buendia; Giri Narasimhan (Bioinform., 2006)

Reconstructing Ancestor-Descendant Lineages from Serially-Sampled Data: A Comparison Study - Patricia Buendia; Timothy M. Collins; Giri Narasimhan (Computational Science - ICCS 2006, 6th International Conference, Reading, UK, May 28-31, 2006, Proceedings, Part II, 2006)

MinPD: Distance-Based Phylogenetic Analysis and Recombination Detection of Serially-Sampled HIV Quasispecies - Patricia Buendia; Giri Narasimhan (3rd International IEEE Computer Society Computational Systems Bioinformatics Conference, CSB 2004, Stanford, CA, USA, August 16-19, 2004, 2004)