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ORCIDChris Whidden
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2010 – 2019
- 2019
[j6]Chris Whidden
, Frederick A. Matsen IV:
Calculating the Unrooted Subtree Prune-and-Regraft Distance. IEEE ACM Trans. Comput. Biol. Bioinform. 16(3): 898-911 (2019)- 2018
- [c6]Chris Whidden, Frederick A. Matsen IV:
Efficiently Inferring Pairwise Subtree Prune-and-Regraft Adjacencies between Phylogenetic Trees. ANALCO 2018: 77-91 - [i8]Chris Whidden, Brian C. Claywell, Thayer Fisher, Andrew F. Magee, Mathieu Fourment, Frederick A. Matsen IV:
Systematic Exploration of the High Likelihood Set of Phylogenetic Tree Topologies. CoRR abs/1811.11007 (2018) - 2017
- [j5]Julia Matsieva, Steven Kelk, Céline Scornavacca, Chris Whidden, Dan Gusfield:
A Resolution of the Static Formulation Question for the Problem of Computing the History Bound. IEEE ACM Trans. Comput. Biol. Bioinform. 14(2): 404-417 (2017) - [j4]Chris Whidden, Frederick A. Matsen IV:
Ricci-Ollivier curvature of the rooted phylogenetic subtree-prune-regraft graph. Theor. Comput. Sci. 699: 1-20 (2017) - 2016
- [j3]Chris Whidden, Robert G. Beiko, Norbert Zeh:
Fixed-Parameter and Approximation Algorithms for Maximum Agreement Forests of Multifurcating Trees. Algorithmica 74(3): 1019-1054 (2016) - [j2]Leo van Iersel, Steven Kelk, Nela Lekic, Chris Whidden, Norbert Zeh:
Hybridization Number on Three Rooted Binary Trees is EPT. SIAM J. Discret. Math. 30(3): 1607-1631 (2016) - [c5]Chris Whidden, Frederick A. Matsen IV:
Ricci-Ollivier Curvature of the Rooted Phylogenetic Subtree-Prune-Regraft Graph. ANALCO 2016: 106-120 - [i7]Chris Whidden, Frederick A. Matsen IV:
Efficiently Inferring Pairwise Subtree Prune-and-Regraft Adjacencies between Phylogenetic Trees. CoRR abs/1606.08893 (2016) - [i6]Chris Whidden, Frederick A. Matsen IV:
Chain Reduction Preserves the Unrooted Subtree Prune-and-Regraft Distance. CoRR abs/1611.02351 (2016) - 2015
- [i5]Chris Whidden, Frederick A. Matsen IV:
Ricci-Ollivier Curvature of the Rooted Phylogenetic Subtree-Prune-Regraft Graph. CoRR abs/1504.00304 (2015) - [i4]Chris Whidden, Frederick A. Matsen IV:
Calculating the Unrooted Subtree Prune-and-Regraft Distance. CoRR abs/1511.07529 (2015) - 2014
- [i3]Leo van Iersel, Steven Kelk, Nela Lekic, Chris Whidden, Norbert Zeh:
Hybridization Number on Three Trees. CoRR abs/1402.2136 (2014) - 2013
- [j1]Chris Whidden, Robert G. Beiko, Norbert Zeh:
Fixed-Parameter Algorithms for Maximum Agreement Forests. SIAM J. Comput. 42(4): 1431-1466 (2013) - [i2]Chris Whidden, Robert G. Beiko, Norbert Zeh:
Fixed-Parameter and Approximation Algorithms for Maximum Agreement Forests of Multifurcating Trees. CoRR abs/1305.0512 (2013) - 2011
- [i1]Chris Whidden, Robert G. Beiko, Norbert Zeh:
Fixed-Parameter and Approximation Algorithms for Maximum Agreement Forests. CoRR abs/1108.2664 (2011) - 2010
- [c4]Chris Whidden, Robert G. Beiko, Norbert Zeh:
Fast FPT Algorithms for Computing Rooted Agreement Forests: Theory and Experiments. SEA 2010: 141-153
2000 – 2009
- 2009
- [c3]Vlado Keselj, Haibin Liu, Norbert Zeh, Christian Blouin, Chris Whidden:
Finding optimal parameters for edit distance based sequence classification is NP-hard. KDD Workshop on Statistical and Relational Learning in Bioinformatics 2009: 17-21 - [c2]Chris Whidden, Norbert Zeh:
A Unifying View on Approximation and FPT of Agreement Forests. WABI 2009: 390-402 - 2005
- [c1]Tony Abou-Assaleh, Nick Cercone, Jon Doyle, Vlado Keselj, Chris Whidden:
DalTREC 2005 QA System Jellyfish: Mark-and-Match Approach to Question Answering. TREC 2005
Coauthor Index
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