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2020 – today
- 2024
[j27]Joshua C. Smith, Brian D. Williamson, David J. Cronkite, Daniel Park, Jill M. Whitaker, Michael F. McLemore, Joshua Osmanski, Robert Winter, Arvind Ramaprasan, Ann Kelley, Mary Shea, Saranrat Wittayanukorn, Danijela Stojanovic, Yueqin Zhao, Sengwee Toh, Kevin B. Johnson, David Aronoff, David S. Carrell
:
Data-driven automated classification algorithms for acute health conditions: applying PheNorm to COVID-19 disease. J. Am. Medical Informatics Assoc. 31(3): 574-582 (2024)- [j26]David S. Carrell, James S. Floyd, Susan Gruber, Brian L. Hazlehurst, Patrick J. Heagerty, Jennifer C. Nelson, Brian D. Williamson, Robert Ball:
A general framework for developing computable clinical phenotype algorithms. J. Am. Medical Informatics Assoc. 31(8): 1785-1796 (2024) - 2023
- [j25]Pascal S. Brandt, Abel N. Kho, Yuan Luo, Jennifer A. Pacheco, Theresa L. Walunas, Hakon Hakonarson, George Hripcsak, Cong Liu, Ning Shang, Chunhua Weng, Nephi Walton, David S. Carrell, Paul K. Crane, Eric B. Larson, Christopher G. Chute, Iftikhar J. Kullo, Robert J. Carroll, Joshua C. Denny, Andrea H. Ramirez, Wei-Qi Wei, Jyotishman Pathak, Laura K. Wiley, Rachel L. Richesson, Justin B. Starren, Luke V. Rasmussen:
Characterizing variability of electronic health record-driven phenotype definitions. J. Am. Medical Informatics Assoc. 30(3): 427-437 (2023) - 2022
- [j24]Jingzhi Yu, Jennifer A. Pacheco, Anika S. Ghosh, Yuan Luo, Chunhua Weng, Ning Shang, Barbara Benoit, David S. Carrell, Robert J. Carroll, Ozan Dikilitas, Robert R. Freimuth, Vivian S. Gainer, Hakon Hakonarson, George Hripcsak, Iftikhar J. Kullo, Frank D. Mentch, Shawn N. Murphy, Peggy L. Peissig, Andrea H. Ramirez, Nephi Walton, Wei-Qi Wei, Luke V. Rasmussen:
Under-specification as the source of ambiguity and vagueness in narrative phenotype algorithm definitions. BMC Medical Informatics Decis. Mak. 22(1): 23 (2022) - [j23]Robert B. Penfold, David S. Carrell, David J. Cronkite, Chester Pabiniak, Tammy Dodd, Ashley M. H. Glass, Eric Johnson, Ella Thompson, H. Michael Arrighi, Paul E. Stang:
Development of a machine learning model to predict mild cognitive impairment using natural language processing in the absence of screening. BMC Medical Informatics Decis. Mak. 22(1): 129 (2022) - [c15]Joshua C. Smith, Daniel Park, Jill Whitaker Bey, Michael F. McLemore, Elizabeth Hanchrow, Dax Westerman, Joshua Osmanski, Robert Winter, Arvind Ramaprasan, Ann Kelley, Mary Shea, David J. Cronkite, Saranrat Wittayanukorn, Danijela Stojanovic, Yueqin Zhao, Darren Toh, Kevin B. Johnson, David Aronoff, David Carrell:
Data-driven automated classification algorithms for acute health conditions: Applying PheNorm to COVID-19 disease. AMIA 2022 - 2021
- [j22]Ning Shang, Atlas Khan, Fernanda Polubriaginof, Francesca Zanoni, Karla Mehl, David Fasel, Paul E. Drawz, Robert J. Carroll, Joshua C. Denny, Matthew A. Hathcock, Adelaide M. Arruda-Olson, Peggy L. Peissig, Richard A. Dart, Murray H. Brilliant, Eric B. Larson, David S. Carrell, Sarah A. Pendergrass, Shefali Setia Verma, Marylyn D. Ritchie, Barbara Benoit, Vivian S. Gainer, Elizabeth W. Karlson, Adam S. Gordon, Gail P. Jarvik, Ian B. Stanaway, David R. Crosslin, Sumit Mohan, Iuliana Ionita-Laza, Nicholas P. Tatonetti, Ali G. Gharavi, George Hripcsak, Chunhua Weng, Krzysztof Kiryluk:
Medical records-based chronic kidney disease phenotype for clinical care and "big data" observational and genetic studies. npj Digit. Medicine 4 (2021) - [c14]Jennifer A. Pacheco, Luke V. Rasmussen, Ken Wiley, Thomas N. Person, David J. Cronkite, Sunghwan Sohn, Shawn N. Murphy, Justin H. Gundelach, Vivian S. Gainer, Victor M. Castro, Cong Liu, Todd Lingren, Frank D. Mentch, Agnes S. Sundaresan, Garrett Eickelberg, Valerie Willis, Al'ona Furmanchuk, Roshan Patel, David S. Carrell, Marc S. Williams, Elizabeth W. Karlson, Jodell E. Linder, Yuan Luo, Chunhua Weng, Wei-Qi Wei:
Evaluation of the Portability of Natural Language Processing-based Computable Phenotypes in the eMERGE Network. AMIA 2021 - 2020
- [j21]David S. Carrell, Bradley A. Malin, David J. Cronkite, John S. Aberdeen, Cheryl Clark, Muqun (Rachel) Li, Dikshya Bastakoty, Steve Nyemba, Lynette Hirschman:
Resilience of clinical text de-identified with "hiding in plain sight" to hostile reidentification attacks by human readers. J. Am. Medical Informatics Assoc. 27(9): 1374-1382 (2020)
2010 – 2019
- 2019
- [j20]Nathaniel D. Mercaldo, Kyle B. Brothers, David S. Carrell, Ellen Wright Clayton, John J. Connolly, Ingrid A. Holm, Carol R. Horowitz, Gail P. Jarvik, Terrie E. Kitchner, Rongling Li, Catherine A. McCarty, Jennifer B. McCormick, Valerie D. McManus, Melanie F. Myers, Joshua J. Pankratz, Martha J. Shrubsole, Maureen E. Smith, Sarah C. Stallings, Janet L. Williams, Jonathan S. Schildcrout:
Enrichment sampling for a multi-site patient survey using electronic health records and census data. J. Am. Medical Informatics Assoc. 26(3): 219-227 (2019) - [j19]David S. Carrell, David J. Cronkite, Muqun (Rachel) Li, Steve Nyemba, Bradley A. Malin, John S. Aberdeen, Lynette Hirschman:
The machine giveth and the machine taketh away: a parrot attack on clinical text deidentified with hiding in plain sight. J. Am. Medical Informatics Assoc. 26(12): 1536-1544 (2019) - [j18]George Hripcsak, Ning Shang, Peggy L. Peissig, Luke V. Rasmussen, Cong Liu, Barbara Benoit, Robert J. Carroll, David S. Carrell, Joshua C. Denny, Ozan Dikilitas, Vivian S. Gainer, Kayla Marie Howell, Jeffrey G. Klann, Iftikhar J. Kullo, Todd Lingren, Frank D. Mentch, Shawn N. Murphy, Karthik Natarajan, Chunhua Weng:
Facilitating phenotype transfer using a common data model. J. Biomed. Informatics 96 (2019) - [j17]Ning Shang, Cong Liu, Luke V. Rasmussen, Casey N. Ta, Robert J. Carroll, Barbara Benoit, Todd Lingren, Ozan Dikilitas, Frank D. Mentch, David S. Carrell, Wei-Qi Wei, Yuan Luo, Vivian S. Gainer, Iftikhar J. Kullo, Jennifer A. Pacheco, Hakon Hakonarson, Theresa L. Walunas, Joshua C. Denny, Chunhua Weng:
Making work visible for electronic phenotype implementation: Lessons learned from the eMERGE network. J. Biomed. Informatics 99 (2019) - [c13]Catherine Y. Lim, Andrew B. L. Berry, Andrea L. Hartzler, Tad Hirsch, David S. Carrell, Zoë A. Bermet, James D. Ralston:
Facilitating Self-reflection about Values and Self-care Among Individuals with Chronic Conditions. CHI 2019: 655 - 2018
- [j16]Hannu T. Huhdanpaa, W. Katherine Tan, Sean D. Rundell, Pradeep Suri, Falgun H. Chokshi, Bryan A. Comstock, Patrick J. Heagerty, Kathryn T. James, Andrew L. Avins, Srdjan S. Nedeljkovic, David R. Nerenz, David F. Kallmes, Patrick H. Luetmer, Karen J. Sherman, Nancy L. Organ, Brent Griffith, Curtis P. Langlotz, David Carrell, Saeed Hassanpour, Jeffrey G. Jarvik:
Using Natural Language Processing of Free-Text Radiology Reports to Identify Type 1 Modic Endplate Changes. J. Digit. Imaging 31(1): 84-90 (2018) - [c12]Yongtai Liu, Zhiyu Wan, Weiyi Xia, Murat Kantarcioglu, Yevgeniy Vorobeychik, Ellen Wright Clayton, Abel N. Kho, David S. Carrell, Bradley A. Malin:
Detecting the Presence of an Individual in Phenotypic Summary Data. AMIA 2018 - [c11]Stéphane M. Meystre, David S. Carrell, Lynette Hirschman, John S. Aberdeen, Paul Fearn, Valentina Petkov, Jonathan C. Silverstein:
Automatic Text De-Identification: How and When is it Acceptable? AMIA 2018 - 2017
- [j15]Emily Rose Holzinger, Shefali S. Verma, Carrie Colleen Buchanan Moore, Molly A. Hall, Rishika De, Diane Gilbert-Diamond, Matthew B. Lanktree, Nathan Pankratz, Antoinette Amuzu, Amber Burt, Caroline Dale, Scott M. Dudek, Clement E. Furlong, Tom R. Gaunt, Daniel Seung Kim, Helene Riess, Suthesh Sivapalaratnam, Vinicius Tragante, Erik P. A. van Iperen, Ariel Brautbar, David S. Carrell, David R. Crosslin, Gail P. Jarvik, Helena Kuivaniemi, Iftikhar J. Kullo, Eric B. Larson, Laura J. Rasmussen-Torvik, Gerard Tromp, Jens Baumert, Karen J. Cruickshanks, Martin Farrall, Aroon D. Hingorani, G. K. Hovingh, Marcus E. Kleber, Barbara E. Klein, Ronald Klein, Wolfgang Koenig, Leslie A. Lange, Winfried März, Kari E. North, N. Charlotte Onland-Moret, Alex P. Reiner, Philippa J. Talmud, Yvonne T. van der Schouw, James G. Wilson, Mika Kivimäki, Meena Kumari, Jason H. Moore, Fotios Drenos, Folkert W. Asselbergs, Brendan J. Keating, Marylyn D. Ritchie:
Discovery and replication of SNP-SNP interactions for quantitative lipid traits in over 60,000 individuals. BioData Min. 10(1): 25:1-25:20 (2017) - [j14]David S. Carrell, Robert E. Schoen, Daniel A. Leffler, Michele Morris, Sherri Rose, Andrew Baer, Seth D. Crockett, Rebecca Gourevitch, Katie M. Dean, Ateev Mehrotra:
Challenges in adapting existing clinical natural language processing systems to multiple, diverse health care settings. J. Am. Medical Informatics Assoc. 24(5): 986-991 (2017) - [c10]Jeffrey S. Brown, Robert Ball, David S. Carrell, Leonard W. D'Avolio, Keith Marsolo:
Is an Algorithm Just an Algorithm? How to Define Clinical Concepts for Use in Comparative Safety and Effectiveness Distributed Research Networks. CRI 2017 - 2016
- [j13]Jacqueline Kirby, Peter Speltz, Luke V. Rasmussen, Melissa A. Basford, Omri Gottesman, Peggy L. Peissig, Jennifer A. Pacheco, Gerard Tromp, Jyotishman Pathak, David S. Carrell, Stephen B. Ellis, Todd Lingren, William K. Thompson, Guergana Savova, Jonathan L. Haines, Dan M. Roden, Paul A. Harris, Joshua C. Denny:
PheKB: a catalog and workflow for creating electronic phenotype algorithms for transportability. J. Am. Medical Informatics Assoc. 23(6): 1046-1052 (2016) - [j12]Muqun Li, David Carrell, John S. Aberdeen, Lynette Hirschman, Jacqueline Kirby, Bo Li, Yevgeniy Vorobeychik, Bradley A. Malin:
Optimizing annotation resources for natural language de-identification via a game theoretic framework. J. Biomed. Informatics 61: 97-109 (2016) - 2015
- [j11]Rishika De, Shefali S. Verma, Fotios Drenos, Emily Rose Holzinger, Michael Holmes, Molly A. Hall, David R. Crosslin, David Carrell, Hakon Hakonarson, Gail P. Jarvik, Eric B. Larson, Jennifer A. Pacheco, Laura Rasmussen-Torvik, Carrie Moore, Folkert W. Asselbergs, Jason H. Moore, Marylyn D. Ritchie, Brendan Keating, Diane Gilbert-Diamond:
Identifying gene-gene interactions that are highly associated with Body Mass Index using Quantitative Multifactor Dimensionality Reduction (QMDR). BioData Min. 8: 41 (2015) - [j10]David S. Carrell, David J. Cronkite, Roy E. Palmer, Kathleen Saunders, David E. Gross, Elizabeth T. Masters, Timothy R. Hylan, Michael Von Korff:
Using natural language processing to identify problem usage of prescription opioids. Int. J. Medical Informatics 84(12): 1057-1064 (2015) - [j9]Huan Mo, William K. Thompson, Luke V. Rasmussen, Jennifer A. Pacheco, Guoqian Jiang, Richard C. Kiefer, Qian Zhu, Jie Xu, Enid N. H. Montague, David S. Carrell, Todd Lingren, Frank D. Mentch, Yizhao Ni, Firas H. Wehbe, Peggy L. Peissig, Gerard Tromp, Eric B. Larson, Christopher G. Chute, Jyotishman Pathak, Joshua C. Denny, Peter Speltz, Abel N. Kho, Gail P. Jarvik, Cosmin Adrian Bejan, Marc S. Williams, Kenneth Borthwick, Terrie E. Kitchner, Dan M. Roden, Paul A. Harris:
Desiderata for computable representations of electronic health records-driven phenotype algorithms. J. Am. Medical Informatics Assoc. 22(6): 1220-1230 (2015) - [j8]Hongyuan Gao, Erin J. Aiello Bowles, David Carrell, Diana S. M. Buist:
Using natural language processing to extract mammographic findings. J. Biomed. Informatics 54: 77-84 (2015) - 2014
- [j7]Muqun Li, David Carrell, John S. Aberdeen, Lynette Hirschman, Bradley A. Malin:
De-identification of clinical narratives through writing complexity measures. Int. J. Medical Informatics 83(10): 750-767 (2014) - [j6]Sandy Huang, Paea LePendu, Srinivasan V Iyer, Ming Tai-Seale, David Carrell, Nigam H. Shah:
Toward personalizing treatment for depression: predicting diagnosis and severity. J. Am. Medical Informatics Assoc. 21(6): 1069-1075 (2014) - [j5]Luke V. Rasmussen, William K. Thompson, Jennifer A. Pacheco, Abel N. Kho, David Carrell, Jyotishman Pathak, Peggy L. Peissig, Gerard Tromp, Joshua C. Denny, Justin B. Starren:
Design patterns for the development of electronic health record-driven phenotype extraction algorithms. J. Biomed. Informatics 51: 280-286 (2014) - [c9]Scott R. Halgrim, Leslie Sizemore, Edward Pham, Gabrielle Gundersen, David Carrell, Karen Wernli, Jessica Chubak, Carolyn M. Rutter:
Linking Adenomas Between Colonoscopy And Pathology Notes For PROSPR. AMIA 2014 - 2013
- [j4]David Carrell, Bradley A. Malin, John S. Aberdeen, Samuel Bayer, Cheryl Clark, Ben Wellner, Lynette Hirschman:
Hiding in plain sight: use of realistic surrogates to reduce exposure of protected health information in clinical text. J. Am. Medical Informatics Assoc. 20(2): 342-348 (2013) - [c8]Sandy Huang, Paea LePendu, Srinivasan V Iyer, Ming Tai-Seale, David Carrell, Nigam Shah:
Predictive Models in Mental Health: From Diagnosis to Treatment. AMIA 2013 - [c7]Stephen T. Wu, Timothy A. Miller, James J. Masanz, Matthew Coarr, David Carrell, Scott R. Halgrim, David Harris, Cheryl Clark:
Negation's Not Solved: Reconsidering Negation Annotation and Evaluation. AMIA 2013 - 2012
- [j3]Peggy L. Peissig, Luke V. Rasmussen, Richard L. Berg, James G. Linneman, Catherine A. McCarty, Carol Waudby, Lin Chen, Joshua C. Denny, Russell A. Wilke, Jyotishman Pathak, David Carrell, Abel N. Kho, Justin B. Starren:
Importance of multi-modal approaches to effectively identify cataract cases from electronic health records. J. Am. Medical Informatics Assoc. 19(2): 225-234 (2012) - [c6]Suzette J. Bielinski, Jyotishman Pathak, Hongfang Liu, Sunghwan Sohn, Gail P. Jarvik, David Carrell, Naveen Pereira, Véronique L. Roger:
Using Electronic Health Records to Identify Heart Failure Cohorts with Differentiation for Preserved and Reduced Ejection Fraction. AMIA 2012 - [c5]Robert J. Carroll, Katherine P. Liao, Anne E. Eyler, Lisa Bastarache, Dana C. Crawford, Peggy L. Peissig, Jyotishman Pathak, David Carrell, Abel N. Kho, Rongling Li, Daniel R. Masys, Gail P. Jarvik, Christopher G. Chute, Rex L. Chisholm, Eric B. Larson, Catherine A. McCarty, Iftikhar J. Kullo:
Using PheWAS to Assess Pleiotropy of Genetic Risk Scores for Rheumatoid Arthritis and Coronary Artery Disease in the eMERGE Network. AMIA 2012 - 2011
- [c4]David Carrell:
A Strategy for Deploying Secure Cloud-Based Natural Language Processing Systems for Applied Research Involving Clinical Text. HICSS 2011: 1-11 - 2010
- [j2]Jonathan S. Schildcrout, Melissa A. Basford, Jill M. Pulley, Daniel R. Masys, Dan M. Roden, Deede Wang, Christopher G. Chute, Iftikhar J. Kullo, David Carrell, Peggy L. Peissig, Abel N. Kho, Joshua C. Denny:
An analytical approach to characterize morbidity profile dissimilarity between distinct cohorts using electronic medical records. J. Biomed. Informatics 43(6): 914-923 (2010)
2000 – 2009
- 2007
- [j1]James D. Ralston, David Carrell, Robert Reid, Melissa A. Anderson, Maureena Moran, James Hereford:
Research Paper: Patient Web Services Integrated with a Shared Medical Record: Patient Use and Satisfaction. J. Am. Medical Informatics Assoc. 14(6): 798-806 (2007) - 2006
- [c3]David Carrell, James D. Ralston:
Variation in Adoption Rates of a Patient Web Portal with a Shared Medical Record by Age, Gender, and Morbidity Level. AMIA 2006 - [c2]James D. Ralston, James Hereford, David Carrell, Maureena Moran:
Use and Satisfaction of a Patient Web Portal with a Shared Medical Record between Patients and Providers. AMIA 2006 - 2005
- [c1]David Carrell, James D. Ralston:
Messages, Strands and Threads: Measuring Use of Electronic Patient-Provider Messaging. AMIA 2005
Coauthor Index
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last updated on 2024-10-07 21:21 CEST by the dblp team
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