Genomicus in 2022: comparative tools for thousands of genomes and reconstructed ancestors - Nga Thi Thuy Nguyen; Pierre Vincens; Jean-François Dufayard; Hugues Roest Crollius; Alexandra Louis (Nucleic Acids Res., 2022)

GreenPhylDB v5: a comparative pangenomic database for plant genomes - Valentin Guignon; Abdel Toure; Gaëtan Droc; Jean-François Dufayard; Matthieu G. Conte; Mathieu Rouard (Nucleic Acids Res., 2021)

SNiPlay3: a web-based application for exploration and large scale analyses of genomic variations - Alexis Dereeper; Felix Homa; Gwendoline Andres; Guilhem Sempéré; Gautier Sarah; Yann Hueber; Jean-François Dufayard; Manuel Ruiz (Nucleic Acids Res., 2015)

The Banana Genome Hub - Gaëtan Droc; Delphine Larivière; Valentin Guignon; Nabila Yahiaoui; Dominique This; Olivier Garsmeur; Alexis Dereeper; Chantal Hamelin; Xavier Argout; Jean-François Dufayard; Juliette Lengelle; Franc-Christophe Baurens; et al. (Database J. Biol. Databases Curation, 2013)

Databases of homologous gene families for comparative genomics - Simon Penel; Anne-Muriel Arigon; Jean-François Dufayard; Anne-Sophie Sertier; Vincent Daubin; Laurent Duret; Manolo Gouy; Guy Perrière (BMC Bioinform., 2009)

PlasmoDraft: a database of Plasmodium falciparum gene function predictions based on postgenomic data - Laurent Bréhélin; Jean-François Dufayard; Olivier Gascuel (BMC Bioinform., 2008)

Phylogeny.fr: robust phylogenetic analysis for the non-specialist - Alexis Dereeper; Valentin Guignon; Guillaume Blanc; Stéphane Audic; S. Buffet; François Chevenet; Jean-François Dufayard; Stéphane Guindon; Vincent Lefort; Magali Lescot; Jean-Michel Claverie; Olivier Gascuel (Nucleic Acids Res., 2008)

Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases - Jean-François Dufayard; Laurent Duret; Simon Penel; Manolo Gouy; François Rechenmann; Guy Perrière (Bioinform., 2005)