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Anne Morgat
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2020 – today
- 2024
- [i1]Po-Ting Lai, Elisabeth Coudert, Lucila Aimo, Kristian B. Axelsen, Lionel Breuza, Edouard De Castro, Marc Feuermann, Anne Morgat, Lucille Pourcel, Ivo Pedruzzi, Sylvain Poux, Nicole Redaschi, Catherine Rivoire, Anastasia Sveshnikova, Chih-Hsuan Wei, Robert Leaman, Ling Luo, Zhiyong Lu, Alan J. Bridge:
EnzChemRED, a rich enzyme chemistry relation extraction dataset. CoRR abs/2404.14209 (2024) - 2023
- [j14]Elisabeth Coudert
, Sebastien Gehant
, Edouard De Castro
, Monica Pozzato, Delphine Baratin, Teresa Batista Neto
, Christian J. A. Sigrist
, Nicole Redaschi
, Alan J. Bridge
, Lucila Aimo, Ghislaine Argoud-Puy, Andrea H. Auchincloss, Kristian B. Axelsen
, Parit Bansal, Marie-Claude Blatter, Jerven T. Bolleman, Emmanuel Boutet, Lionel Breuza, Blanca Cabrera Gil, Cristina Casals-Casas, Kamal Chikh Echioukh, Béatrice A. Cuche, Anne Estreicher, Maria Livia Famiglietti, Marc Feuermann, Elisabeth Gasteiger, Pascale Gaudet, Vivienne Baillie Gerritsen, Arnaud Gos, Nadine Gruaz-Gumowski, Chantal Hulo, Nevila Hyka-Nouspikel, Florence Jungo, Arnaud Kerhornou, Philippe Le Mercier, Damien Lieberherr, Patrick Masson, Anne Morgat, Venkatesh Muthukrishnan, Salvo Paesano, Ivo Pedruzzi
, Sandrine Pilbout, Lucille Pourcel, Sylvain Poux, Manuela Pruess, Catherine Rivoire
, Karin Sonesson, Shyamala Sundaram, Alex Bateman
, Maria Jesus Martin
, Sandra E. Orchard
, Michele Magrane
, Shadab Ahmad, Emanuele Alpi, Emily H. Bowler-Barnett
, Ramona Britto, Hema Bye-A-Jee, Austra Cukura, Paul Denny
, Tunca Dogan, Thankgod Ebenezer, Jun Fan, Penelope Garmiri, Leonardo Jose da Costa Gonzales, Emma Hatton-Ellis, Abdulrahman Hussein, Alexandr Ignatchenko
, Giuseppe Insana
, Rizwan Ishtiaq, Vishal Joshi, Dushyanth Jyothi
, Swaathi Kandasamy, Antonia Lock
, Aurelien Luciani, Marija Lugaric, Jie Luo, Yvonne Lussi, Alistair MacDougall, Fábio Madeira
, Mahdi Mahmoudy, Alok Mishra, Katie Moulang, Andrew Nightingale, Sangya Pundir, Guoying Qi, Shriya Raj
, Pedro Raposo, Daniel Rice, Rabie Saidi, Rafael Santos
, Elena Speretta
, James D. Stephenson, Prabhat Totoo, Edward Turner, Nidhi Tyagi, Preethi Vasudev, Kate Warner, Xavier Watkins, Rossana Zaru, Hermann Zellner, Cathy H. Wu, Cecilia N. Arighi, Leslie Arminski, Chuming Chen, Yongxing Chen, Hongzhan Huang, Kati Laiho, Peter B. McGarvey, Darren A. Natale, Karen Ross, C. R. Vinayaka, Qinghua Wang, Yuqi Wang:
Annotation of biologically relevant ligands in UniProtKB using ChEBI. Bioinform. 39(1) (2023) - [c1]Sebastien Gehant, Elisabeth Coudert, Anne Morgat, Jerven T. Bolleman, Nicole Redaschi, Alan J. Bridge, The UniProt Consortium:
UniProt, ChEBI and IDSM Sachem: exploring biologically relevant ligands. SWAT4HCLS 2023: 181-183 - 2022
- [j13]Valérie de Crécy-Lagard
, Rocio Amorin de Hegedus
, Cecilia N. Arighi
, Jill Babor, Alex Bateman
, Ian Blaby
, Crysten Blaby-Haas, Alan J. Bridge
, Stephen K. Burley
, Stacey Cleveland, Lucy J. Colwell, Ana Conesa
, Christian Dallago
, Antoine Danchin
, Anita de Waard
, Adam Deutschbauer, Raquel Dias, Yousong Ding
, Gang Fang, Iddo Friedberg
, John Gerlt, Joshua Goldford, Mark Gorelik, Benjamin M. Gyori
, Christopher S. Henry, Geoffrey Hutinet, Marshall Jaroch, Peter D. Karp, Liudmyla Kondratova, Zhiyong Lu
, Aron Marchler-Bauer, Maria Jesus Martin
, Claire D. McWhite, Gaurav D. Moghe, Paul Monaghan, Anne Morgat, Christopher J. Mungall
, Darren A. Natale
, William C. Nelson, Seán I. O'Donoghue, Christine A. Orengo, Katherine H. O'Toole, Predrag Radivojac
, Colbie Reed, Richard J. Roberts, Dmitri Rodionov, Irina A. Rodionova
, Jeffrey DePons, Lana Saleh, Gloria M. Sheynkman
, Françoise Thibaud-Nissen, Paul D. Thomas
, Peter Uetz, David Vallenet
, Erica Watson Carter, Peter Weigele
, Valerie Wood
, Elisha M. Wood-Charlson, Jin Xu
:
A roadmap for the functional annotation of protein families: a community perspective. Database J. Biol. Databases Curation 2022(2022) (2022) - [j12]Parit Bansal
, Anne Morgat
, Kristian B. Axelsen
, Venkatesh Muthukrishnan
, Elisabeth Coudert
, Lucila Aimo
, Nevila Hyka-Nouspikel
, Elisabeth Gasteiger
, Arnaud Kerhornou
, Teresa Batista Neto
, Monica Pozzato
, Marie-Claude Blatter
, Alexandr Ignatchenko
, Nicole Redaschi
, Alan J. Bridge
:
Rhea, the reaction knowledgebase in 2022. Nucleic Acids Res. 50(D1): 693-700 (2022) - 2021
- [j11]Seth Carbon, Eric Douglass, Benjamin M. Good, Deepak R. Unni
, Nomi L. Harris, Christopher J. Mungall, Siddartha Basu, Rex L. Chisholm
, Robert J. Dodson, Eric Hartline, Petra Fey, Paul D. Thomas, Laurent-Philippe Albou
, Dustin Ebert, Michael J. Kesling, Huaiyu Mi, Anushya Muruganujan, Xiaosong Huang, Tremayne Mushayahama, Sandra A. LaBonte
, Deborah A. Siegele, Giulia Antonazzo
, Helen Attrill
, Nick H. Brown, Phani V. Garapati
, Steven J. Marygold
, Vitor Trovisco, Gilberto dos Santos, Kathleen Falls, Christopher J. Tabone
, Pinglei Zhou, Joshua L. Goodman
, Victor B. Strelets, Jim Thurmond
, Penelope Garmiri
, Rizwan Ishtiaq, Milagros Rodríguez-López, Marcio Luis Acencio
, Martin Kuiper, Astrid Lægreid, Colin Logie
, Ruth C. Lovering
, Barbara Kramarz
, Shirin C. C. Saverimuttu, Sandra M. Pinheiro, Heather Gunn, Renzhi Su, Katherine E. Thurlow
, Marcus C. Chibucos
, Michelle G. Giglio, Suvarna Nadendla, James B. Munro
, Rebecca C. Jackson, Margaret J. Duesbury, Noemi del-Toro, Birgit H. M. Meldal
, Kalpana Paneerselvam, Livia Perfetto, Pablo Porras
, Sandra E. Orchard
, Anjali Shrivastava, Hsin-Yu Chang
, Robert D. Finn
, Alex L. Mitchell
, Neil D. Rawlings, Lorna J. Richardson
, Amaia Sangrador-Vegas
, Judith A. Blake, Karen R. Christie, Mary E. Dolan, Harold J. Drabkin, David P. Hill, Li Ni, Dmitry M. Sitnikov, Midori A. Harris, Stephen G. Oliver, Kim Rutherford
, Valerie Wood, Jaqueline Hayles, Jürg Bähler, Elizabeth R. Bolton, Jeffrey DePons, Melinda R. Dwinell, G. Thomas Hayman, Mary L. Kaldunski, Anne E. Kwitek
, Stanley J. F. Laulederkind, Cody Plasterer, Marek Tutaj, Mahima Vedi
, Shur-Jen Wang, Peter D'Eustachio, Lisa Matthews, James P. Balhoff, Suzi A. Aleksander, Michael J. Alexander, J. Michael Cherry
, Stacia R. Engel
, Felix Gondwe, Kalpana Karra, Stuart R. Miyasato, Robert S. Nash, Matt Simison, Marek S. Skrzypek, Shuai Weng, Edith D. Wong, Marc Feuermann
, Pascale Gaudet
, Anne Morgat, Erica Bakker, Tanya Z. Berardini
, Leonore Reiser
, Shabari Subramaniam
, Eva Huala
, Cecilia N. Arighi, Andrea H. Auchincloss, Kristian B. Axelsen
, Ghislaine Argoud-Puy, Alex Bateman
, Marie-Claude Blatter, Emmanuel Boutet, Emily Bowler
, Lionel Breuza, Alan J. Bridge
, Ramona Britto
, Hema Bye-A-Jee
, Cristina Casals-Casas, Elisabeth Coudert, Paul Denny
, Anne Estreicher, Maria Livia Famiglietti, George E. Georghiou
, Arnaud Gos, Nadine Gruaz-Gumowski, Emma Hatton-Ellis, Chantal Hulo, Alexandr Ignatchenko
, Florence Jungo, Kati Laiho, Philippe Le Mercier
, Damien Lieberherr, Antonia Lock
, Yvonne Lussi, Alistair MacDougall, Michele Magrane
, Maria Jesus Martin
, Patrick Masson
, Darren A. Natale
, Nevila Hyka-Nouspikel, Ivo Pedruzzi
, Lucille Pourcel, Sylvain Poux, Sangya Pundir, Catherine Rivoire
, Elena Speretta
, Shyamala Sundaram, Nidhi Tyagi, Kate Warner
, Rossana Zaru, Cathy H. Wu
, Alexander D. Diehl, Juancarlos Chan, Christian A. Grove, Raymond Y. N. Lee, Hans-Michael Müller, Daniela Raciti
, Kimberly Van Auken, Paul W. Sternberg, Matthew Berriman, Michael Paulini, Kevin L. Howe
, Sibyl Gao, Adam Wright, Lincoln Stein, Douglas G. Howe, Sabrina Toro
, Monte Westerfield, Pankaj Jaiswal, Laurel Cooper
, Justin Elser:
The Gene Ontology resource: enriching a GOld mine. Nucleic Acids Res. 49(Database-Issue): D325-D334 (2021) - [j10]Alex Bateman
, Maria Jesus Martin
, Sandra E. Orchard
, Michele Magrane
, Rahat Agivetova, Shadab Ahmad, Emanuele Alpi
, Emily H. Bowler-Barnett
, Ramona Britto
, Borisas Bursteinas, Hema Bye-A-Jee
, Ray Coetzee, Austra Cukura, Alan W. Sousa da Silva, Paul Denny
, Tunca Dogan
, Thankgod Ebenezer, Jun Fan, Leyla Jael García Castro
, Penelope Garmiri
, George E. Georghiou
, Leonardo Gonzales, Emma Hatton-Ellis
, Abdulrahman Hussein
, Alexandr Ignatchenko
, Giuseppe Insana
, Rizwan Ishtiaq, Petteri Jokinen, Vishal Joshi, Dushyanth Jyothi
, Antonia Lock
, Rodrigo Lopez
, Aurelien Luciani
, Jie Luo, Yvonne Lussi
, Alistair MacDougall, Fábio Madeira
, Mahdi Mahmoudy, Manuela Menchi
, Alok Mishra, Katie Moulang, Andrew Nightingale, Carla Susana Oliveira, Sangya Pundir, Guoying Qi
, Shriya Raj
, Daniel Rice, Milagros Rodríguez-López, Rabie Saidi, Joseph Sampson, Tony Sawford, Elena Speretta
, Edward Turner
, Nidhi Tyagi, Preethi Vasudev, Vladimir Volynkin, Kate Warner
, Xavier Watkins, Rossana Zaru, Hermann Zellner, Alan J. Bridge
, Sylvain Poux, Nicole Redaschi
, Lucila Aimo, Ghislaine Argoud-Puy, Andrea H. Auchincloss, Kristian B. Axelsen
, Parit Bansal
, Delphine Baratin, Marie-Claude Blatter, Jerven T. Bolleman, Emmanuel Boutet
, Lionel Breuza, Cristina Casals-Casas, Edouard De Castro, Kamal Chikh Echioukh, Elisabeth Coudert, Béatrice A. Cuche, Mikael Doche, Dolnide Dornevil, Anne Estreicher, Maria Livia Famiglietti, Marc Feuermann
, Elisabeth Gasteiger, Sebastien Gehant, Vivienne Baillie Gerritsen, Arnaud Gos, Nadine Gruaz-Gumowski, Ursula Hinz, Chantal Hulo, Nevila Hyka-Nouspikel, Florence Jungo, Guillaume Keller, Arnaud Kerhornou
, Vicente Lara, Philippe Le Mercier
, Damien Lieberherr, Thierry Lombardot, Xavier Martin, Patrick Masson
, Anne Morgat, Teresa Batista Neto, Salvo Paesano, Ivo Pedruzzi
, Sandrine Pilbout, Lucille Pourcel, Monica Pozzato, Manuela Pruess, Catherine Rivoire
, Christian J. A. Sigrist, Karin Sonesson, Andre Stutz, Shyamala Sundaram, Michael Tognolli, Laure Verbregue, Cathy H. Wu
, Cecilia N. Arighi, Leslie Arminski, Chuming Chen
, Yongxing Chen, John S. Garavelli, Hongzhan Huang, Kati Laiho, Peter B. McGarvey
, Darren A. Natale
, Karen Ross, C. R. Vinayaka, Qinghua Wang, Yuqi Wang, Lai-Su Yeh, Jian Zhang, Patrick Ruch
, Douglas Teodoro
:
UniProt: the universal protein knowledgebase in 2021. Nucleic Acids Res. 49(Database-Issue): D480-D489 (2021) - 2020
- [j9]Anne Morgat
, Thierry Lombardot
, Elisabeth Coudert, Kristian B. Axelsen, Teresa Batista Neto, Sebastien Gehant, Parit Bansal
, Jerven T. Bolleman
, Elisabeth Gasteiger, Edouard De Castro, Delphine Baratin, Monica Pozzato
, Ioannis Xenarios, Sylvain Poux
, Nicole Redaschi
, Alan J. Bridge
, The UniProt Consortium:
Enzyme annotation in UniProtKB using Rhea. Bioinform. 36(6): 1896-1901 (2020)
2010 – 2019
- 2019
- [j8]Thierry Lombardot
, Anne Morgat
, Kristian B. Axelsen
, Lucila Aimo, Nevila Hyka-Nouspikel, Anne Niknejad, Alexandr Ignatchenko
, Ioannis Xenarios, Elisabeth Coudert, Nicole Redaschi
, Alan J. Bridge
:
Updates in Rhea: SPARQLing biochemical reaction data. Nucleic Acids Res. 47(Database-Issue): D596-D600 (2019) - 2017
- [j7]Anne Morgat
, Thierry Lombardot
, Kristian B. Axelsen
, Lucila Aimo
, Anne Niknejad, Nevila Hyka-Nouspikel, Elisabeth Coudert
, Monica Pozzato, Marco Pagni
, Sébastien Moretti
, Steven Rosanoff, Joseph Onwubiko
, Lydie Bougueleret, Ioannis Xenarios, Nicole Redaschi
, Alan J. Bridge
:
Updates in Rhea - an expert curated resource of biochemical reactions. Nucleic Acids Res. 45(Database-Issue): D415-D418 (2017) - 2016
- [j6]Sébastien Moretti
, Olivier Martin, T. Van Du Tran
, Alan J. Bridge
, Anne Morgat
, Marco Pagni
:
MetaNetX/MNXref - reconciliation of metabolites and biochemical reactions to bring together genome-scale metabolic networks. Nucleic Acids Res. 44(Database-Issue): 523-526 (2016) - 2015
- [j5]Anne Morgat
, Kristian B. Axelsen
, Thierry Lombardot
, Rafael Alcántara, Lucila Aimo
, Mohamed Zerara, Anne Niknejad
, Eugeni Belda
, Nevila Hyka-Nouspikel, Elisabeth Coudert
, Nicole Redaschi
, Lydie Bougueleret, Christoph Steinbeck
, Ioannis Xenarios, Alan J. Bridge
:
Updates in Rhea - a manually curated resource of biochemical reactions. Nucleic Acids Res. 43(Database-Issue): 459-464 (2015) - 2014
- [j4]Thomas Bernard
, Alan J. Bridge
, Anne Morgat
, Sébastien Moretti
, Ioannis Xenarios
, Marco Pagni
:
Reconciliation of metabolites and biochemical reactions for metabolic networks. Briefings Bioinform. 15(1): 123-135 (2014) - 2012
- [j3]Rafael Alcántara
, Kristian B. Axelsen
, Anne Morgat
, Eugeni Belda
, Elisabeth Coudert
, Alan J. Bridge
, Hong Cao, Paula de Matos, Marcus Ennis
, Steve Turner, Gareth I. Owen
, Lydie Bougueleret, Ioannis Xenarios
, Christoph Steinbeck
:
Rhea - a manually curated resource of biochemical reactions. Nucleic Acids Res. 40(Database-Issue): 754-760 (2012) - [j2]Anne Morgat
, Eric Coissac
, Elisabeth Coudert
, Kristian B. Axelsen
, Guillaume Keller, Amos Bairoch
, Alan J. Bridge
, Lydie Bougueleret, Ioannis Xenarios
, Alain Viari:
UniPathway: a resource for the exploration and annotation of metabolic pathways. Nucleic Acids Res. 40(Database-Issue): 761-769 (2012)
2000 – 2009
- 2005
- [j1]Frédéric Boyer
, Anne Morgat
, Laurent Labarre, Joël Pothier
, Alain Viari:
Syntons, metabolons and interactons: an exact graph-theoretical approach for exploring neighbourhood between genomic and functional data. Bioinform. 21(23): 4209-4215 (2005)
Coauthor Index
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last updated on 2024-08-05 20:23 CEST by the dblp team
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