Design, implementation, and operation of a rapid, robust named entity recognition web service - Sune Pletscher-Frankild; Lars Juhl Jensen (J. Cheminformatics, 2019)

ENVIRONMENTS and EOL: identification of Environment Ontology terms in text and the annotation of the Encyclopedia of Life - Evangelos Pafilis; Sune Pletscher-Frankild; Julia Schnetzer; Lucia Fanini; Sarah Faulwetter; Christina Pavloudi; Katerina Vasileiadou; Patrick Leary; Jennifer Hammock; Katja Schulz; Cynthia Sims Parr; Christos Arvanitidis; et al. (Bioinform., 2015)

COMPARTMENTS: unification and visualization of protein subcellular localization evidence - Janos X. Binder; Sune Pletscher-Frankild; Kalliopi Tsafou; Christian Stolte; Seán I. O'Donoghue; Reinhard Schneider; Lars Juhl Jensen (Database J. Biol. Databases Curation, 2014)

Protein-driven inference of miRNA-disease associations - Søren Mørk; Sune Pletscher-Frankild; Albert Pallejà Caro; Jan Gorodkin; Lars Juhl Jensen (Bioinform., 2014)

STITCH 4: integration of protein-chemical interactions with user data - Michael Kuhn; Damian Szklarczyk; Sune Pletscher-Frankild; Thomas H. Blicher; Christian von Mering; Lars Juhl Jensen; Peer Bork (Nucleic Acids Res., 2014)

Dictionary construction and identification of possible adverse drug events in Danish clinical narrative text - Robert Eriksson; Peter Bjødstrup Jensen; Sune Frankild; Lars Juhl Jensen; Søren Brunak (J. Am. Medical Informatics Assoc., 2013)

STRING v9.1: protein-protein interaction networks, with increased coverage and integration - Andrea Franceschini; Damian Szklarczyk; Sune Frankild; Michael Kuhn; Milan Simonovic; Alexander Roth; Jianyi Lin; Pablo Minguez; Peer Bork; Christian von Mering; Lars Juhl Jensen (Nucleic Acids Res., 2013)

Immune epitope database analysis resource (IEDB-AR) - Qing Zhang; Peng Wang; Yohan Kim; Pernille Haste-Andersen; John E. Beaver; Philip E. Bourne; Huynh-Hoa Bui; Søren Buus; Sune Frankild; Jason Greenbaum; Ole Lund; Claus Lundegaard; et al. (Nucleic Acids Res., 2008)

A Community Resource Benchmarking Predictions of Peptide Binding to MHC-I Molecules - Bjoern Peters; Huynh-Hoa Bui; Sune Frankild; Morten Nielsen; Claus Lundegaard; Emrah Kostem; Derek Basch; Kasper Lamberth; Mikkel Harndahl; Ward Fleri; Stephen S. Wilson; John Sidney; et al. (PLoS Comput. Biol., 2006)