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BibTeX records: Chris Bizon
@inproceedings{DBLP:conf/bigdataconf/OlasunkanmiMKLA24, author = {Olawumi Olasunkanmi and Evan Morris and Yaphet Kebede and Harlin Lee and Stanley C. Ahalt and Alexander Tropsha and Chris Bizon}, editor = {Wei Ding and Chang{-}Tien Lu and Fusheng Wang and Liping Di and Kesheng Wu and Jun Huan and Raghu Nambiar and Jundong Li and Filip Ilievski and Ricardo Baeza{-}Yates and Xiaohua Hu}, title = {Explainable Enrichment-Driven GrAph Reasoner {(EDGAR)} for Large Knowledge Graphs with Applications in Drug Repurposing}, booktitle = {{IEEE} International Conference on Big Data, BigData 2024, Washington, DC, USA, December 15-18, 2024}, pages = {777--782}, publisher = {{IEEE}}, year = {2024}, url = {https://doi.org/10.1109/BigData62323.2024.10825589}, doi = {10.1109/BIGDATA62323.2024.10825589}, timestamp = {Tue, 25 Feb 2025 08:17:20 +0100}, biburl = {https://dblp.org/rec/conf/bigdataconf/OlasunkanmiMKLA24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2409-18659, author = {Olawumi Olasunkanmi and Evan Morris and Yaphet Kebede and Harlin Lee and Stanley C. Ahalt and Alexander Tropsha and Chris Bizon}, title = {Explainable Enrichment-Driven GrAph Reasoner {(EDGAR)} for Large Knowledge Graphs with Applications in Drug Repurposing}, journal = {CoRR}, volume = {abs/2409.18659}, year = {2024}, url = {https://doi.org/10.48550/arXiv.2409.18659}, doi = {10.48550/ARXIV.2409.18659}, eprinttype = {arXiv}, eprint = {2409.18659}, timestamp = {Mon, 03 Mar 2025 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2409-18659.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/biodb/MatentzogluBBBB22, author = {Nicolas Matentzoglu and James P. Balhoff and Susan M. Bello and Chris Bizon and Matthew H. Brush and Tiffany J. Callahan and Christopher G. Chute and William D. Duncan and Chris T. A. Evelo and Davera Gabriel and John B. Graybeal and Alasdair J. G. Gray and Benjamin M. Gyori and Melissa A. Haendel and Henriette Harmse and Nomi L. Harris and Ian Harrow and Harshad Hegde and Amelia L. Hoyt and Charles Tapley Hoyt and Dazhi Jiao and Ernesto Jim{\'{e}}nez{-}Ruiz and Simon Jupp and Hyeongsik Kim and Sebastian K{\"{o}}hler and Thomas Liener and Qinqin Long and James Malone and James A. McLaughlin and Julie A. McMurry and Sierra A. T. Moxon and Monica C. Munoz{-}Torres and David Osumi{-}Sutherland and James A. Overton and Bjoern Peters and Tim E. Putman and N{\'{u}}ria Queralt{-}Rosinach and Kent A. Shefchek and Harold Solbrig and Anne E. Thessen and Tania Tudorache and Nicole A. Vasilevsky and Alex H. Wagner and Christopher J. Mungall}, title = {A Simple Standard for Sharing Ontological Mappings {(SSSOM)}}, journal = {Database J. Biol. Databases Curation}, volume = {2022}, number = {2022}, year = {2022}, url = {https://doi.org/10.1093/database/baac035}, doi = {10.1093/DATABASE/BAAC035}, timestamp = {Fri, 04 Jul 2025 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/biodb/MatentzogluBBBB22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/WaldropCBPCHKBW22, author = {Alexander M. Waldrop and John B. Cheadle and Kira Bradford and Alexander Preiss and Robert F. Chew and Jonathan R. Holt and Yaphet Kebede and Nathan Braswell and Matthew Watson and Virginia Hench and Andrew Crerar and Chris M. Ball and Carl Schreep and P. J. Linebaugh and Hannah Hiles and Rebecca R. Boyles and Chris Bizon and Ashok Kumar Krishnamurthy and Steven Cox}, title = {Dug: a semantic search engine leveraging peer-reviewed knowledge to query biomedical data repositories}, journal = {Bioinform.}, volume = {38}, number = {12}, pages = {3252--3258}, year = {2022}, url = {https://doi.org/10.1093/bioinformatics/btac284}, doi = {10.1093/BIOINFORMATICS/BTAC284}, timestamp = {Tue, 01 Apr 2025 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/WaldropCBPCHKBW22.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2203-13906, author = {Deepak R. Unni and Sierra A. T. Moxon and Michael Bada and Matthew H. Brush and Richard M. Bruskiewich and Paul A. Clemons and Vlado Danc{\'{\i}}k and Michel Dumontier and Karamarie Fecho and Gustavo Glusman and Jennifer J. Hadlock and Nomi L. Harris and Arpita Joshi and Tim E. Putman and Guangrong Qin and Stephen A. Ramsey and Kent A. Shefchek and Harold Solbrig and Karthik Soman and Anne E. Thessen and Melissa A. Haendel and Chris Bizon and Christopher J. Mungall}, title = {Biolink Model: {A} Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science}, journal = {CoRR}, volume = {abs/2203.13906}, year = {2022}, url = {https://doi.org/10.48550/arXiv.2203.13906}, doi = {10.48550/ARXIV.2203.13906}, eprinttype = {arXiv}, eprint = {2203.13906}, timestamp = {Sun, 06 Oct 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2203-13906.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/KornBLKWOVMCBT21, author = {Daniel Robert Korn and Tesia M. Bobrowski and Michael Li and Yaphet Kebede and Patrick Wang and Phillips Owen and Gaurav Vaidya and Eugene N. Muratov and Rada Chirkova and Chris Bizon and Alexander Tropsha}, title = {{COVID-KOP:} integrating emerging {COVID-19} data with the {ROBOKOP} database}, journal = {Bioinform.}, volume = {37}, number = {4}, pages = {586--587}, year = {2021}, url = {https://doi.org/10.1093/bioinformatics/btaa718}, doi = {10.1093/BIOINFORMATICS/BTAA718}, timestamp = {Sun, 06 Oct 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/KornBLKWOVMCBT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/FilerKBTMBRLBTP21, author = {Dayne L. Filer and Fengshen Kuo and Alicia T. Brandt and Christian R. Tilley and Piotr A. Mieczkowski and Jonathan S. Berg and Kimberly Robasky and Yun Li and Chris Bizon and Jeffery L. Tilson and Bradford C. Powell and Darius M. Bost and Clark D. Jeffries and Kirk C. Wilhelmsen}, title = {Pre-capture multiplexing provides additional power to detect copy number variation in exome sequencing}, journal = {{BMC} Bioinform.}, volume = {22}, number = {1}, pages = {374}, year = {2021}, url = {https://doi.org/10.1186/s12859-021-04246-w}, doi = {10.1186/S12859-021-04246-W}, timestamp = {Mon, 03 Mar 2025 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/FilerKBTMBRLBTP21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcisd/KornPBASBBCCMT21, author = {Daniel Robert Korn and Vera Pervitsky and Tesia M. Bobrowski and Vinicius M. Alves and Charles Schmitt and Chris Bizon and Nancy Baker and Rada Chirkova and Artem Cherkasov and Eugene N. Muratov and Alexander Tropsha}, title = {{COVID-19} Knowledge Extractor {(COKE):} {A} Curated Repository of Drug-Target Associations Extracted from the {CORD-19} Corpus of Scientific Publications on {COVID-19}}, journal = {J. Chem. Inf. Model.}, volume = {61}, number = {12}, pages = {5734--5741}, year = {2021}, url = {https://doi.org/10.1021/acs.jcim.1c01285}, doi = {10.1021/ACS.JCIM.1C01285}, timestamp = {Sun, 06 Oct 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcisd/KornPBASBBCCMT21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bigdataconf/YiBBWSRRSK21, author = {Hong Yi and Chris Bizon and David Borland and Matthew Watson and Matthew Satusky and Robert Rittmuller and Randa Radwan and Raghavan Srinivasan and Ashok K. Krishnamurthy}, editor = {Yixin Chen and Heiko Ludwig and Yicheng Tu and Usama M. Fayyad and Xingquan Zhu and Xiaohua Hu and Suren Byna and Xiong Liu and Jianping Zhang and Shirui Pan and Vagelis Papalexakis and Jianwu Wang and Alfredo Cuzzocrea and Carlos Ordonez}, title = {{AI} Tool with Active Learning for Detection of Rural Roadside Safety Features}, booktitle = {2021 {IEEE} International Conference on Big Data (Big Data), Orlando, FL, USA, December 15-18, 2021}, pages = {5317--5326}, publisher = {{IEEE}}, year = {2021}, url = {https://doi.org/10.1109/BigData52589.2021.9671360}, doi = {10.1109/BIGDATA52589.2021.9671360}, timestamp = {Tue, 06 Aug 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/bigdataconf/YiBBWSRRSK21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/vahc/BorlandBFPXCBG21, author = {David Borland and Irena Brain and Karamarie Fecho and Emily R. Pfaff and Hao Xu and James Champion and Chris Bizon and David Gotz}, title = {Enabling Longitudinal Exploratory Analysis of Clinical {COVID} Data}, booktitle = {{IEEE} Workshop on Visual Analytics in Healthcare, {VAHC} 2021, New Orleans, LA, USA, October 24-25, 2021}, pages = {19--24}, publisher = {{IEEE}}, year = {2021}, url = {https://doi.org/10.1109/VAHC53616.2021.00008}, doi = {10.1109/VAHC53616.2021.00008}, timestamp = {Mon, 28 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/vahc/BorlandBFPXCBG21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2108-11476, author = {David Borland and Irena Brain and Karamarie Fecho and Emily R. Pfaff and Hao Xu and James Champion and Chris Bizon and David Gotz}, title = {Enabling Longitudinal Exploratory Analysis of Clinical {COVID} Data}, journal = {CoRR}, volume = {abs/2108.11476}, year = {2021}, url = {https://arxiv.org/abs/2108.11476}, eprinttype = {arXiv}, eprint = {2108.11476}, timestamp = {Fri, 27 Aug 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2108-11476.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/corr/abs-2112-07051, author = {Nicolas Matentzoglu and James P. Balhoff and Susan M. Bello and Chris Bizon and Matthew H. Brush and Tiffany J. Callahan and Christopher G. Chute and William D. Duncan and Chris T. A. Evelo and Davera Gabriel and John B. Graybeal and Alasdair J. G. Gray and Benjamin M. Gyori and Melissa A. Haendel and Henriette Harmse and Nomi L. Harris and Ian Harrow and Harshad Hegde and Amelia L. Hoyt and Charles Tapley Hoyt and Dazhi Jiao and Ernesto Jim{\'{e}}nez{-}Ruiz and Simon Jupp and Hyeongsik Kim and Sebastian K{\"{o}}hler and Thomas Liener and Qinqin Long and James Malone and James A. McLaughlin and Julie A. McMurry and Sierra A. T. Moxon and Monica C. Munoz{-}Torres and David Osumi{-}Sutherland and James A. Overton and Bjoern Peters and Tim E. Putman and N{\'{u}}ria Queralt{-}Rosinach and Kent A. Shefchek and Harold Solbrig and Anne E. Thessen and Tania Tudorache and Nicole A. Vasilevsky and Alex H. Wagner and Christopher J. Mungall}, title = {A Simple Standard for Sharing Ontological Mappings {(SSSOM)}}, journal = {CoRR}, volume = {abs/2112.07051}, year = {2021}, url = {https://arxiv.org/abs/2112.07051}, eprinttype = {arXiv}, eprint = {2112.07051}, timestamp = {Thu, 13 Feb 2025 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/corr/abs-2112-07051.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/amia/FechoBMSSX0M0T20, author = {Karamarie Fecho and Chris Bizon and Frederick W. Miller and Shepherd Schurman and Charles Schmitt and William Xue and Patrick Wang and Kenneth D. Morton and Steven Cox and Alexander Tropsha}, title = {Use of the Open {ROBOKOP} Knowledge Graph-Based Application to Provide Mechanistic Explanations for Observed Associations between Environmental Exposures and Immune-Mediated Diseases}, booktitle = {{AMIA} 2020, American Medical Informatics Association Annual Symposium, Virtual Event, USA, November 14-18, 2020}, publisher = {{AMIA}}, year = {2020}, url = {https://knowledge.amia.org/72332-amia-1.4602255/t005-1.4604904/t005-1.4604905/3415599-1.4605620/3416787-1.4605617}, timestamp = {Wed, 17 Apr 2024 11:47:01 +0200}, biburl = {https://dblp.org/rec/conf/amia/FechoBMSSX0M0T20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MortonWBCBKFT19, author = {Kenneth Morton and Patrick Wang and Chris Bizon and Steven Cox and James P. Balhoff and Yaphet Kebede and Karamarie Fecho and Alexander Tropsha}, title = {{ROBOKOP:} an abstraction layer and user interface for knowledge graphs to support question answering}, journal = {Bioinform.}, volume = {35}, number = {24}, pages = {5382--5384}, year = {2019}, url = {https://doi.org/10.1093/bioinformatics/btz604}, doi = {10.1093/BIOINFORMATICS/BTZ604}, timestamp = {Mon, 03 Mar 2025 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/MortonWBCBKFT19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jamia/FechoPXCCSPBKTA19, author = {Karamarie Fecho and Emily R. Pfaff and Hao Xu and James Champion and Steve Cox and Lisa Stillwell and David B. Peden and Chris Bizon and Ashok Kumar Krishnamurthy and Alexander Tropsha and Stanley C. Ahalt}, title = {A novel approach for exposing and sharing clinical data: the Translator Integrated Clinical and Environmental Exposures Service}, journal = {J. Am. Medical Informatics Assoc.}, volume = {26}, number = {10}, pages = {1064--1073}, year = {2019}, url = {https://doi.org/10.1093/jamia/ocz042}, doi = {10.1093/JAMIA/OCZ042}, timestamp = {Mon, 03 Mar 2025 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jamia/FechoPXCCSPBKTA19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcisd/BizonCBKWMFT19, author = {Chris Bizon and Steven Cox and James P. Balhoff and Yaphet Kebede and Patrick Wang and Kenneth Morton and Karamarie Fecho and Alexander Tropsha}, title = {{ROBOKOP} {KG} and {KGB:} Integrated Knowledge Graphs from Federated Sources}, journal = {J. Chem. Inf. Model.}, volume = {59}, number = {12}, pages = {4968--4973}, year = {2019}, url = {https://doi.org/10.1021/acs.jcim.9b00683}, doi = {10.1021/ACS.JCIM.9B00683}, timestamp = {Tue, 01 Jun 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jcisd/BizonCBKWMFT19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/DuanLA13, author = {Qing Duan and Eric Yi Liu and Paul L. Auer and Guosheng Zhang and Ethan M. Lange and Goo Jun and Chris Bizon and Shuo Jiao and Steven Buyske and Nora Franceschini and Chris S. Carlson and Li Hsu and Alex P. Reiner and Ulrike Peters and Jeffrey Haessler and Keith Curtis and Christina L. Wassel and Jennifer G. Robinson and Lisa W. Martin and Christopher A. Haiman and Loic Le Marchand and Tara Cox Matise and Lucia A. Hindorff and Dana C. Crawford and Themistocles L. Assimes and Hyun Min Kang and Gerardo Heiss and Rebecca D. Jackson and Charles L. Kooperberg and James G. Wilson and Gon{\c{c}}alo R. Abecasis and Kari E. North and Deborah A. Nickerson and Leslie A. Lange and Yun Li}, title = {Imputation of coding variants in African Americans: better performance using data from the exome sequencing project}, journal = {Bioinform.}, volume = {29}, number = {21}, pages = {2744--2749}, year = {2013}, url = {https://doi.org/10.1093/bioinformatics/btt477}, doi = {10.1093/BIOINFORMATICS/BTT477}, timestamp = {Fri, 07 Mar 2025 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/DuanLA13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/CabanskiCBWPWPMH12, author = {Christopher R. Cabanski and Keary Cavin and Chris Bizon and Matthew D. Wilkerson and Joel S. Parker and Kirk C. Wilhelmsen and Charles M. Perou and J. S. Marron and D. Neil Hayes}, title = {ReQON: a Bioconductor package for recalibrating quality scores from next-generation sequencing data}, journal = {{BMC} Bioinform.}, volume = {13}, pages = {221}, year = {2012}, url = {https://doi.org/10.1186/1471-2105-13-221}, doi = {10.1186/1471-2105-13-221}, timestamp = {Sun, 06 Oct 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/CabanskiCBWPWPMH12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jbi/ManeBSOBPG12, author = {Ketan K. Mane and Chris Bizon and Charles Schmitt and Phillips Owen and Bruce Burchett and Ricardo Pietrobon and Kenneth Gersing}, title = {VisualDecisionLinc: {A} visual analytics approach for comparative effectiveness-based clinical decision support in psychiatry}, journal = {J. Biomed. Informatics}, volume = {45}, number = {1}, pages = {101--106}, year = {2012}, url = {https://doi.org/10.1016/j.jbi.2011.09.003}, doi = {10.1016/J.JBI.2011.09.003}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jbi/ManeBSOBPG12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ihi/ManeOBSG12, author = {Ketan K. Mane and Phillips Owen and Chris Bizon and Charles Schmitt and Kenneth Gersing}, editor = {Gang Luo and Jiming Liu and Christopher C. Yang}, title = {Mapping patient treatment profiles and electronic medical records to a clinical guideline for use in patient care}, booktitle = {{ACM} International Health Informatics Symposium, {IHI} '12, Miami, FL, USA, January 28-30, 2012}, pages = {755--760}, publisher = {{ACM}}, year = {2012}, url = {https://doi.org/10.1145/2110363.2110453}, doi = {10.1145/2110363.2110453}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ihi/ManeOBSG12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/PrlicBRBBGB10, author = {Andreas Prlic and Spencer Bliven and Peter W. Rose and Wolfgang Bluhm and Chris Bizon and Adam Godzik and Philip E. Bourne}, title = {Pre-calculated protein structure alignments at the {RCSB} {PDB} website}, journal = {Bioinform.}, volume = {26}, number = {23}, pages = {2983--2985}, year = {2010}, url = {https://doi.org/10.1093/bioinformatics/btq572}, doi = {10.1093/BIOINFORMATICS/BTQ572}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/PrlicBRBBGB10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }

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