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Stefan J. Zasada
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2010 – 2019
- 2018
- [j11]Jumana Dakka, Matteo Turilli
, David W. Wright, Stefan J. Zasada, Vivek Balasubramanian, Shunzhou Wan, Peter V. Coveney, Shantenu Jha
:
High-throughput binding affinity calculations at extreme scales. BMC Bioinform. 19-S(18): 33-45 (2018) - [c16]Jumana Dakka, Kristof Farkas-Pall, Vivek Balasubramanian, Matteo Turilli
, Shunzhou Wan, David W. Wright, Stefan J. Zasada, Peter V. Coveney, Shantenu Jha
:
Enabling Trade-offs Between Accuracy and Computational Cost: Adaptive Algorithms to Reduce Time to Clinical Insight. CCGrid 2018: 572-577 - [i7]Jumana Dakka, Kristof Farkas-Pall, Vivek Balasubramanian, Matteo Turilli, David W. Wright, Shunzhou Wan, Stefan J. Zasada, Peter V. Coveney, Shantenu Jha:
Rapid, concurrent and adaptive extreme scale binding free energy calculation. CoRR abs/1801.01174 (2018) - 2017
- [i6]Jumana Dakka, Matteo Turilli, David W. Wright, Stefan J. Zasada, Vivek Balasubramanian, Shunzhou Wan, Peter V. Coveney, Shantenu Jha:
High-throughput Binding Affinity Calculations at Extreme Scales. CoRR abs/1712.09168 (2017) - 2016
- [j10]Derek Groen
, Agastya Bhati
, James J. Suter, James Hetherington
, Stefan J. Zasada, Peter V. Coveney:
FabSim: Facilitating computational research through automation on large-scale and distributed e-infrastructures. Comput. Phys. Commun. 207: 375-385 (2016) - 2015
- [b1]Stefan J. Zasada:
Putting the user at the centre of the grid : simplifying usability and resource selection for high performance computing. University College London, UK, 2015 - [i5]Derek Groen, Agastya Bhati, James J. Suter, James Hetherington, Stefan J. Zasada, Peter V. Coveney:
FabSim: facilitating computational research through automation on large-scale and distributed e-infrastructures. CoRR abs/1512.02194 (2015) - [i4]Stefan J. Zasada, Peter V. Coveney:
A Distributed Multi-agent Market Place for HPC Compute Cycle Resource Trading. CoRR abs/1512.04343 (2015) - 2014
- [j9]Derek Groen
, Stefan J. Zasada, Peter V. Coveney:
Survey of Multiscale and Multiphysics Applications and Communities. Comput. Sci. Eng. 16(2): 34-43 (2014) - [j8]Stefan J. Zasada, David Chan-Wei Chang, Ali Nasrat Haidar, Peter V. Coveney:
Flexible composition and execution of large scale applications on distributed e-infrastructures. J. Comput. Sci. 5(1): 51-62 (2014) - [c15]J. Marés, Lev Shamardin, Gabriele Weiler, Alberto Anguita, Stelios Sfakianakis, Elias Neri, Stefan J. Zasada, Norbert M. Graf, Peter V. Coveney:
p-medicine: A Medical Informatics Platform for Integrated Large Scale Heterogeneous Patient Data. AMIA 2014 - 2013
- [j7]Morris Riedel
, Peter Wittenburg, Johannes Reetz
, Mark van de Sanden
, Jedrzej Rybicki, Benedikt von St. Vieth, Giuseppe Fiameni, Giacomo Mariani, Alberto Michelini
, Claudio Cacciari, Willem Elbers, Daan Broeder, Robert Verkerk, Elena Erastova, Michael Lautenschlaeger, Reinhard Budig, Hannes Thiemann, Peter V. Coveney, Stefan J. Zasada, Ali Nasrat Haidar, Otto Buechner, Cristina Manzano
, A. Shiraz Memon, Ahmed Shiraz Memon
, Heikki Helin, Jari Suhonen, Damien Lecarpentier, Kimmo Koski, Thomas Lippert:
A data infrastructure reference model with applications: towards realization of a ScienceTube vision with a data replication service. J. Internet Serv. Appl. 4(1): 1:1-1:17 (2013) - [c14]Katarzyna Rycerz
, Eryk Ciepiela, Grzegorz Dyk, Derek Groen
, Tomasz Gubala, Daniel Harezlak, Maciej Pawlik, James J. Suter, Stefan J. Zasada, Peter V. Coveney, Marian Bubak
:
Support for Multiscale Simulations with Molecular Dynamics. ICCS 2013: 1116-1125 - [c13]Chris Johnson, Anastasia V. Bochenkova
, Alexander A. Granovsky, Peter J. Bond
, Teresa Paramo, Tristan Glatard, William A. Romero R.
, Denis Friboulet, Stefan J. Zasada, Peter V. Coveney:
PRACE DECI (Distributed European Computing Initiative) Minisymposium. PARCO 2013: 805-812 - 2012
- [j6]Stefan J. Zasada, Tao Wang, Ali Nasrat Haidar, Enjie Liu
, Norbert M. Graf
, Gordon Clapworthy, Steven Manos, Peter V. Coveney:
IMENSE: An e-infrastructure environment for patient specific multiscale data integration, modelling and clinical treatment. J. Comput. Sci. 3(5): 314-327 (2012) - [c12]Stefan J. Zasada, Ali Nasrat Haidar, Peter V. Coveney:
A Comparative Analysis of the Usability and Legal Implications of Different Patient Data Sharing Architectures. AMIA 2012 - [c11]David Chan-Wei Chang, Stefan J. Zasada, Peter V. Coveney:
The Application Hosting Environment 3.0: Simplifying biomedical simulations using RESTful web services. CBMS 2012: 1-4 - [c10]Stefan J. Zasada, Mariusz Mamonski, Derek Groen
, Joris Borgdorff
, Ilya Saverchenko, Tomasz Piontek, Krzysztof Kurowski, Peter V. Coveney:
Distributed Infrastructure for Multiscale Computing. DS-RT 2012: 65-74 - [i3]Derek Groen, Stefan J. Zasada, Peter V. Coveney:
Survey of Multiscale and Multiphysics Applications and Communities. CoRR abs/1208.6444 (2012) - [i2]Derek Groen, Joris Borgdorff, Carles Bona-Casas, James Hetherington, Rupert W. Nash, Stefan J. Zasada, Ilya Saverchenko, Mariusz Mamonski, Krzysztof Kurowski, Miguel O. Bernabeu, Alfons G. Hoekstra, Peter V. Coveney:
Flexible composition and execution of high performance, high fidelity multiscale biomedical simulations. CoRR abs/1211.2963 (2012) - 2011
- [j5]Nour Shublaq, Stefan J. Zasada, Peter V. Coveney:
Exciting Times in Computational Science. J. Comput. Sci. 2(4): 315 (2011) - [c9]Derek Groen
, Stefan J. Zasada, Peter V. Coveney:
Taxonomy of Multiscale Computing Communities. e-Science Workshops 2011: 120-127 - [c8]Stefan J. Zasada, Derek Groen
, Peter V. Coveney:
Developing an infrastructure to support multiscale modelling and simulation. TG 2011: 30:1-30:2 - [c7]Stefan J. Zasada, Ali Nasrat Haidar, Peter V. Coveney:
Audited credential delegation: a usable identity management solution for grid environments. TG 2011: 31:1-31:2 - 2010
- [j4]Peter V. Coveney, Giovanni Giupponi, Shantenu Jha
, Steven Manos, Jon MacLaren, Stephen Pickles, R. S. Saksena, Thomas Soddemann, James L. Suter, Mary-Ann Thyveetil, Stefan J. Zasada:
Large scale computational science on federated international grids: The role of switched optical networks. Future Gener. Comput. Syst. 26(1): 99-110 (2010) - [c6]Ali Nasrat Haidar, Stefan J. Zasada, Peter V. Coveney, Ali E. Abdallah, Bruce Beckles:
Audited credential delegation - a user-centric identity management solution for computational grid environments. IAS 2010: 222-227 - [c5]Morris Riedel
, Bernd Schuller
, Michael Rambadt, M. Shahbaz Memon, A. Shiraz Memon
, Achim Streit, Thomas Lippert, Stefan J. Zasada, Steven Manos, Peter V. Coveney, Felix Wolf, Dieter Kranzlmüller:
Exploring the Potential of Using Multiple E-science Infrastructures with Emerging Open Standards-Based E-health Research Tools. CCGRID 2010: 341-348 - [c4]Stefan J. Zasada, Peter V. Coveney:
Computational biomedicine: The role of workflow tools. ICCS 2010: 2753-2761
2000 – 2009
- 2009
- [j3]Stefan J. Zasada, Peter V. Coveney:
Virtualizing access to scientific applications with the Application Hosting Environment. Comput. Phys. Commun. 180(12): 2513-2525 (2009) - [c3]Stefan J. Zasada, Peter V. Coveney:
From campus resources to federated international grids: bridging the gap with the application hosting environment. SC-GCE 2009 - 2008
- [j2]S. Kashif Sadiq
, David W. Wright
, Simon J. Watson
, Stefan J. Zasada, Ileana Stoica, Peter V. Coveney:
Automated Molecular Simulation Based Binding Affinity Calculator for Ligand-Bound HIV-1 Proteases. J. Chem. Inf. Model. 48(9): 1909-1919 (2008) - [i1]Stefan J. Zasada, C. V. Gale, Steven Manos, Peter V. Coveney:
Supercomputing in Clinical Practice. ERCIM News 2008(74) (2008) - 2007
- [j1]Peter V. Coveney, R. S. Saksena, Stefan J. Zasada, Mark McKeown, Stephen Pickles:
The application hosting environment: Lightweight middleware for grid-based computational science. Comput. Phys. Commun. 176(6): 406-418 (2007) - 2006
- [c2]S. Kashif Sadiq, Stefan J. Zasada, Peter V. Coveney:
Grid Assisted Ensemble Molecular Dynamics Simulations of HIV-1 Proteases Reveal Novel Conformations of the Inhibitor Saquinavir. CompLife 2006: 150-161 - [c1]Stefan J. Zasada, R. S. Saksena, Peter V. Coveney, Mark McKeown, Stephen Pickles:
Facilitating User Access to the Grid: A Lightweight Application Hosting Environment for Grid Enabled Computational Science. e-Science 2006: 50
Coauthor Index
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