Conformal Coronary Calcification Volume Estimation with Conditional Coverage via Histogram Clustering. - Jaubert, Olivier; Mohammadi, Salman; Goatman, Keith A.; Mikhael, Shadia; Bradley, Conor; Hughes, Rebecca; Good, Richard; Hipwell, John H.; Dahdouh, Sonia (2025)

Conformal coronary calcification volume estimation with conditional coverage via histogram clustering. - Jaubert, Olivier; Mohammadi, Salman; Goatman, Keith A.; Mikhael, Shadia; Bradley, Conor; Hughes, Rebecca; Good, Richard; Hipwell, John H.; Dahdouh, Sonia (CoRR, 2025)

All You Need Is a Guiding Hand: Mitigating Shortcut Bias in Deep Learning Models for Medical Imaging. - Boland, Christopher; Anderson, Owen; Goatman, Keith A.; Hipwell, John H.; Tsaftaris, Sotirios A.; Dahdouh, Sonia (2024)

Nonrigid reconstruction of 3D breast surfaces with a low-cost RGBD camera for surgical planning and aesthetic evaluation. - Lacher, Rene M.; Vasconcelos, Francisco; Williams, Norman R.; Rindermann, Gerrit; Hipwell, John H.; Hawkes, David J.; Stoyanov, Danail (Medical Image Anal., 2019)

Nonrigid reconstruction of 3D breast surfaces with a low-cost RGBD camera for surgical planning and aesthetic evaluation. - Lacher, Rene M.; Vasconcelos, Francisco; Williams, Norman R.; Rindermann, Gerrit; Hipwell, John H.; Hawkes, David J.; Stoyanov, Danail (CoRR, 2019)

Automated Classification of Breast Cancer Stroma Maturity From Histological Images. - Reis, Sara; Gazinska, Patrycja; Hipwell, John H.; Mertzanidou, Thomy; Naidoo, Kalnisha; Williams, Norman R.; Pinder, Sarah E.; Hawkes, David J. (IEEE Trans. Biomed. Eng., 2017)

A Comparative Study of Breast Surface Reconstruction for Aesthetic Outcome Assessment. - Lacher, Rene M.; Vasconcelos, Francisco; Bishop, David; Williams, Norman R.; Keshtgar, Mohammed; Hawkes, David J.; Hipwell, John H.; Stoyanov, Danail (2017)

A comparative study of breast surface reconstruction for aesthetic outcome assessment. - Lacher, Rene M.; Vasconcelos, Francisco; Bishop, David; Williams, Norman R.; Keshtgar, Mohammed; Hawkes, David J.; Hipwell, John H.; Stoyanov, Danail (CoRR, 2017)

Breast Conserving Surgery Outcome Prediction: A Patient-Specific, Integrated Multi-modal Imaging and Mechano-Biological Modelling Framework. - Eiben, Björn; Lacher, Rene M.; Vavourakis, Vasileios; Hipwell, John H.; Stoyanov, Danail; Williams, Norman R.; Sabczynski, Jörg; Bülow, Thomas; Kutra, Dominik; Meetz, Kirsten; Young, Stewart; Barschdorf, Hans; et al. (2016)

Whole Mastectomy Volume Reconstruction from 2D Radiographs and Its Mapping to Histology. - Mertzanidou, Thomy; Hipwell, John H.; Reis, Sara; Bejnordi, Babak Ehteshami; Hermsen, Meyke; Dalmis, Mehmet; Vreemann, Suzan; Platel, Bram; Laak, Jeroen van der; Karssemeijer, Nico; Mann, Ritse; Bult, Peter; et al. (2016)

2D-3D Registration Accuracy Estimation for Optimised Planning of Image-Guided Pancreatobiliary Interventions. - Hu, Yipeng; Bonmati, Ester; Gibson, Eli; Hipwell, John H.; Hawkes, David J.; Bandula, Steven; Pereira, Stephen P.; Barratt, Dean C. (2016)

Classification of breast cancer stroma as a tool for prognosis. - Reis, Sara; Gazinska, Patrycja; Hipwell, John H.; Mertzanidou, Thomy; Naidoo, Kalnisha; Pinder, Sarah E.; Hawkes, David J. (2016)

Surface driven biomechanical breast image registration. - Eiben, Björn; Vavourakis, Vasileios; Hipwell, John H.; Kabus, Sven; Lorenz, Cristian; Bülow, Thomas; Williams, Norman R.; Keshtgar, Mohammed; Hawkes, David J. (2016)

NiftySim: A GPU-based nonlinear finite element package for simulation of soft tissue biomechanics. - Johnsen, Stian Flage; Taylor, Zeike A.; Clarkson, Matthew J.; Hipwell, John H.; Modat, Marc; Eiben, Björn; Han, Lianghao; Hu, Yipeng; Mertzanidou, Thomy; Hawkes, David J.; Ourselin, Sébastien (Int. J. Comput. Assist. Radiol. Surg., 2015)

Low-cost surface reconstruction for aesthetic results assessment and prediction in breast cancer surgery. - Lacher, Rene M.; Hipwell, John H.; Williams, Norman R.; Keshtgar, Mohammed R. S.; Hawkes, David J.; Stoyanov, Danail (2015)

3D ultrasound simulation based on a biomechanical model of prone MRI in breast cancer imaging. - Morin, Renaud; Eiben, Björn; Bidaut, Luc M.; Hipwell, John H.; Evans, Andrew; Hawkes, David J. (2015)

Minimum slice spacing required to reconstruct 3D shape for serial sections of breast tissue for comparison with medical imaging. - Reis, Sara; Eiben, Björn; Mertzanidou, Thomy; Hipwell, John H.; Hermsen, Meyke; Laak, Jeroen van der; Pinder, Sarah E.; Bult, Peter; Hawkes, David J. (2015)

MRI to X-ray mammography intensity-based registration with simultaneous optimisation of pose and biomechanical transformation parameters. - Mertzanidou, Thomy; Hipwell, John H.; Johnsen, Stian Flage; Han, Lianghao; Eiben, Björn; Taylor, Zeike A.; Ourselin, Sébastien; Huisman, Henkjan J.; Mann, Ritse; Bick, Ulrich; Karssemeijer, Nico; Hawkes, David J. (Medical Image Anal., 2014)

A Nonlinear Biomechanical Model Based Registration Method for Aligning Prone and Supine MR Breast Images. - Han, Lianghao; Hipwell, John H.; Eiben, Björn; Barratt, Dean C.; Modat, Marc; Ourselin, Sébastien; Hawkes, David J. (IEEE Trans. Medical Imaging, 2014)

Modelling Vascularity in Breast Cancer and Surrounding Stroma Using Diffusion MRI and Intravoxel Incoherent Motion. - Bailey, Colleen; Vinnicombe, Sarah; Panagiotaki, Eleftheria; Waugh, Shelley A.; Hipwell, John H.; Alexander, Daniel C.; Kitching, Kathryn; Whelehan, Patsy J.; Pinder, Sarah E.; Evans, Andrew; Hawkes, David J. (2014)

Towards Spatial Correspondence between Specimen and In-vivo Breast Imaging. - Mertzanidou, Thomy; Hipwell, John H.; Dalmis, Mehmet; Platel, Bram; Laak, Jeroen van der; Mann, Ritse; Karssemeijer, Nico; Bult, Peter; Hawkes, David J. (2014)

Breast deformation modelling: comparison of methods to obtain a patient specific unloaded configuration. - Eiben, Björn; Vavourakis, Vasileios; Hipwell, John H.; Kabus, Sven; Lorenz, Cristian; Bülow, Thomas; Hawkes, David J. (2014)

Biomechanically guided prone-to-supine image registration of breast MRI using an estimated reference state. - Eiben, Björn; Han, Lianghao; Hipwell, John H.; Mertzanidou, Thomy; Kabus, Sven; Bülow, Thomas; Lorenz, Cristian; Newstead, Gillian; Abe, Hiroyuki; Keshtgar, Mohammed; Ourselin, Sébastien; Hawkes, David J. (2013)

Numerical Methods for Coupled Reconstruction and Registration in Digital Breast Tomosynthesis. - Yang, Guang; Hipwell, John H.; Hawkes, David J.; Arridge, Simon R. (CoRR, 2013)

MRI to X-ray mammography registration using a volume-preserving affine transformation. - Mertzanidou, Thomy; Hipwell, John H.; Cardoso, Manuel Jorge; Zhang, Xiying; Tanner, Christine; Ourselin, Sébastien; Bick, Ulrich; Huisman, Henkjan J.; Karssemeijer, Nico; Hawkes, David J. (Medical Image Anal., 2012)

Establishing spatial correspondence for the analysis of images from highly deforming anatomy. - Hawkes, David J.; Mertzanidou, Thomy; Hipwell, John H.; Atkinson, David; Roth, Holger; Hampshire, Tom; McClelland, Jamie (2012)

Intensity-Based MRI to X-ray Mammography Registration with an Integrated Fast Biomechanical Transformation. - Mertzanidou, Thomy; Hipwell, John H.; Han, Lianghao; Taylor, Zeike A.; Huisman, Henkjan J.; Bick, Ulrich; Karssemeijer, Nico; Hawkes, David J. (2012)

Characterizing Breast Phenotype with a Novel Measure of Fibroglandular Structure. - Hipwell, John H.; Griffin, Lewis D.; Whelehan, Patsy J.; Song, Wenlong; Zhang, Xiying; Lesniak, Jan M.; Vinnicombe, Sarah; Evans, Andy; Berg, Jonathan; Hawkes, David J. (2012)

Joint Registration and Limited-Angle Reconstruction of Digital Breast Tomosynthesis. - Yang, Guang; Hipwell, John H.; Tanner, Christine; Hawkes, David J.; Arridge, Simon R. (2012)

A hybrid fem-based method for aligning prone and supine images for image guided breast surgery. - Han, Lianghao; Hipwell, John H.; Mertzanidou, Thomy; Carter, Timothy J.; Modat, Marc; Ourselin, Sébastien; Hawkes, David J. (2011)

Discretisation of 3D deformation fields: Implications for establishing correspondence between 2D X-ray mammographic projections. - Jafar, Y.; Hipwell, John H.; Tanner, Christine; Melbourne, Andrew; Hawkes, David J. (2011)

X-ray Mammography - MRI Registration Using a Volume-Preserving Affine Transformation and an EM-MRF for Breast Tissue Classification. - Mertzanidou, Thomy; Hipwell, John H.; Cardoso, Manuel Jorge; Tanner, Christine; Ourselin, Sébastien; Hawkes, David J. (2010)

Breast Shapes on Real and Simulated Mammograms. - Tanner, Christine; Hipwell, John H.; Hawkes, David J.; Székely, Gábor (2010)

Fast Deformation Simulation of Breasts Using GPU-Based Dynamic Explicit Finite Element Method. - Han, Lianghao; Hipwell, John H.; Taylor, Zeike A.; Tanner, Christine; Ourselin, Sébastien; Hawkes, David J. (2010)

The Effect of Motion Correction on Pharmacokinetic Parameter Estimation. - Melbourne, Andrew; Hipwell, John H.; Hawkes, David J. (2010)

Combined Reconstruction and Registration of Digital Breast Tomosynthesis. - Yang, Guang; Hipwell, John H.; Clarkson, Matthew J.; Tanner, Christine; Mertzanidou, Thomy; Gunn, Spencer; Ourselin, Sébastien; Hawkes, David J.; Arridge, Simon R. (2010)

Detection of stable mammographic features under compression using simulated mammograms. - Jafar, Y.; Hipwell, John H.; Tanner, Christine; Hawkes, David J. (2010)

An intensity-based approach to x-ray mammography: MRI registration. - Mertzanidou, Thomy; Hipwell, John H.; Tanner, Christine; Hawkes, David J. (2010)

Integrating Biological Knowledge, Novel Imaging Modalities, and Modeling in Breast Cancer Diagnosis. - Karssemeijer, Nico; Huisman, Henkjan J.; Hawkes, David J.; Hipwell, John H.; Böhler, Tobias; Lesniak, Jan M.; Tanner, Christine; Székely, Gábor; Niessen, Wiro J.; Hahn, Horst K. (2009)

Using statistical deformation models for the registration of multimodal breast images. - Tanner, Christine; Hipwell, John H.; Hawkes, David J. (2009)

Statistical Deformation Models of Breast Compressions from Biomechanical Simulations. - Tanner, Christine; Hipwell, John H.; Hawkes, David J. (2008)

Postoperative Calculation of Acetabular Cup Position Using 2-D-3-D Registration. - Penney, Graeme P.; Edwards, Philip J.; Hipwell, John H.; Slomczykowski, Mike; Revie, Ian; Hawkes, David J. (IEEE Trans. Biomed. Eng., 2007)

A New Validation Method for X-ray Mammogram Registration Algorithms Using a Projection Model of Breast X-ray Compression. - Hipwell, John H.; Tanner, Christine; Crum, William R.; Schnabel, Julia A.; Hawkes, David J. (IEEE Trans. Medical Imaging, 2007)

New Validation Method for Establishing Correspondence Between Pairs of X-Ray Mammograms. - Hipwell, John H.; Tanner, Christine; Crum, William R.; Hawkes, David J. (2006)

X-Ray Mammogram Registration: A Novel Validation Method. - Hipwell, John H.; Tanner, Christine; Crum, William R.; Hawkes, David J. (2006)

A Comparison of a Similarity-Based and a Feature-Based 2-D-3-D Registration Method for Neurointerventional Use. - McLaughlin, Robert A.; Hipwell, John H.; Hawkes, David J.; Noble, J. Alison; Byrne, James V.; Cox, Tim C. S. (IEEE Trans. Medical Imaging, 2005)

A system for real-time XMR guided cardiovascular intervention. - Rhode, Kawal S.; Sermesant, Maxime; Brogan, David C.; Hegde, Sanjeet; Hipwell, John H.; Lambiase, Pier; Rosenthal, Eric; Bucknall, Clifford; Qureshi, Shakeel A.; Gill, Jaswinder S.; Razavi, Reza; Hill, Derek L. G. (IEEE Trans. Medical Imaging, 2005)

Registration and tracking to integrate x-ray and MR images in an XMR facility. - Rhode, Kawal S.; Hill, Derek L. G.; Edwards, Philip J.; Hipwell, John H.; Rueckert, Daniel; Sanchez-Ortiz, Gerardo I.; Hegde, Sanjeet; Rahunathan, Vithuran; Razavi, Reza (IEEE Trans. Medical Imaging, 2003)

Intensity based 2D-3D registration of cerebral angiograms. - Hipwell, John H.; Penney, Graeme P.; McLaughlin, Robert A.; Rhode, Kawal S.; Summers, Paul E.; Cox, Tim C. S.; Byrne, James V.; Noble, J. Alison; Hawkes, David J. (IEEE Trans. Medical Imaging, 2003)

Application of XMR 2D-3D Registration to Cardiac Interventional Guidance. - Rhode, Kawal S.; Hill, Derek L. G.; Edwards, Philip J.; Hipwell, John H.; Rueckert, Daniel; Sanchez-Ortiz, Gerardo I.; Hegde, Sanjeet; Rahunathan, Vithuran; Razavi, Reza (2003)

2D-3D Intensity Based Registration of DSA and MRA - A Comparison of Similarity Measures. - Hipwell, John H.; Penney, Graeme P.; Cox, Tim C. S.; Byrne, James V.; Hawkes, David J. (2002)

A Comparison of 2D-3D Intensity-Based Registration and Feature-Based Registration for Neurointerventions. - McLaughlin, Robert A.; Hipwell, John H.; Hawkes, David J.; Noble, J. Alison; Byrne, James V.; Cox, Tim C. S. (2002)