Metadata practices for simulation workflows. - Villamar, Jose; Kelbling, Matthias; More, Heather L.; Denker, Michael; Tetzlaff, Tom; Senk, Johanna; Thober, Stephan (CoRR, 2024)

Evaluating the statistical similarity of neural network activity and connectivity via eigenvector angles. - Gutzen, Robin; Grün, Sonja; Denker, Michael (Biosyst., 2023)

Acceleration of the SPADE Method Using a Custom-Tailored FP-Growth Implementation. - Porrmann, Florian; Pilz, Sarah; Stella, Alessandra; Kleinjohann, Alexander; Denker, Michael; Hagemeyer, Jens; Rückert, Ulrich (Frontiers Neuroinformatics, 2021)

odMLtables: A User-Friendly Approach for Managing Metadata of Neurophysiological Experiments. - Sprenger, Julia; Zehl, Lyuba; Pick, Jana; Sonntag, Michael; Grewe, Jan; Wachtler, Thomas; Grün, Sonja; Denker, Michael (Frontiers Neuroinformatics, 2019)

International Neuroscience Initiatives through the Lens of High-Performance Computing. - Bouchard, Kristofer E.; Aimone, James B.; Chun, Miyoung; Dean, Thomas; Denker, Michael; Diesmann, Markus; Donofrio, David; Frank, Loren M.; Kasthuri, Narayanan; Koch, Christof; Rübel, Oliver; Simon, Horst D.; et al. (Computer, 2018)

Rigorous Neural Network Simulations: A Model Substantiation Methodology for Increasing the Correctness of Simulation Results in the Absence of Experimental Validation Data. - Trensch, Guido; Gutzen, Robin; Blundell, Inga; Denker, Michael; Morrison, Abigail (Frontiers Neuroinformatics, 2018)

Reproducible Neural Network Simulations: Statistical Methods for Model Validation on the Level of Network Activity Data. - Gutzen, Robin; Papen, Michael von; Trensch, Guido; Quaglio, Pietro; Grün, Sonja; Denker, Michael (Frontiers Neuroinformatics, 2018)

Handling Metadata in a Neurophysiology Laboratory. - Zehl, Lyuba; Jaillet, Florent; Stoewer, Adrian; Grewe, Jan; Sobolev, Andrey; Wachtler, Thomas; Brochier, Thomas; Riehle, Alexa; Denker, Michael; Grün, Sonja (Frontiers Neuroinformatics, 2016)

ASSET: Analysis of Sequences of Synchronous Events in Massively Parallel Spike Trains. - Torre, Emiliano; Canova, Carlos; Denker, Michael; Gerstein, George L.; Helias, Moritz; Grün, Sonja (PLoS Comput. Biol., 2016)

A Collaborative Simulation-Analysis Workflow for Computational Neuroscience Using HPC. - Senk, Johanna; Yegenoglu, Alper; Amblet, Olivier; Brukau, Yury; Davison, Andrew P.; Lester, David Roland; Lührs, Anna; Quaglio, Pietro; Rostami, Vahid; Rowley, Andrew; Schuller, Bernd; Stokes, Alan Barry; et al. (2016)

Designing Workflows for the Reproducible Analysis of Electrophysiological Data. - Denker, Michael; Grün, Sonja (2015)

Statistical evaluation of synchronous spike patterns extracted by frequent item set mining. - Torre, Emiliano; Picado-Muiño, David; Denker, Michael; Borgelt, Christian; Grün, Sonja (Frontiers Comput. Neurosci., 2013)

Estimating the contribution of assembly activity to cortical dynamics from spike and population measures. - Denker, Michael; Riehle, Alexa; Diesmann, Markus; Grün, Sonja (J. Comput. Neurosci., 2010)

Phase synchronization between LFP and spiking activity in motor cortex during movement preparation. - Denker, Michael; Roux, Sébastien; Timme, Marc; Riehle, Alexa; Grün, Sonja (Neurocomputing, 2007)

A network of electronic neural oscillators reproduces the dynamics of the periodically forced pyloric pacemaker group. - Denker, Michael; Szücs, Attila; Pinto, Reynaldo D.; Abarbanel, Henry D. I.; Selverston, Allen I. (IEEE Trans. Biomed. Eng., 2005)