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Zhongyi Shui
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Publications
- 2025
- [c16]Yuxuan Sun, Yixuan Si, Chenglu Zhu, Xuan Gong, Kai Zhang, Pingyi Chen, Ye Zhang, Zhongyi Shui, Tao Lin, Lin Yang:
CPath-Omni: A Unified Multimodal Foundation Model for Patch and Whole Slide Image Analysis in Computational Pathology. CVPR 2025: 10360-10371 - [c15]Yunlong Zhang, Zhongyi Shui, Honglin Li, Yuxuan Sun, Chenglu Zhu, Lin Yang:
Stable Test-Time Training for Semantic Segmentation with Output Contrastive Loss. ICASSP 2025: 1-5 - [c13]Yuxuan Sun, Yunlong Zhang, Yixuan Si, Chenglu Zhu, Kai Zhang, Zhongyi Shui, Jingxiong Li, Xuan Gong, Xinheng Lyu, Tao Lin, Lin Yang:
PathGen-1.6M: 1.6 Million Pathology Image-text Pairs Generation through Multi-agent Collaboration. ICLR 2025 - [i20]Zhongyi Shui, Ruizhe Guo, Honglin Li, Yuxuan Sun, Yunlong Zhang, Chenglu Zhu, Jiatong Cai, Pingyi Chen, Yanzhou Su, Lin Yang:
Towards Effective and Efficient Context-aware Nucleus Detection in Histopathology Whole Slide Images. CoRR abs/2503.05678 (2025) - [i18]Yuxuan Sun, Yixuan Si, Chenglu Zhu, Kai Zhang, Zhongyi Shui, Bowen Ding, Tao Lin, Lin Yang:
CPathAgent: An Agent-based Foundation Model for Interpretable High-Resolution Pathology Image Analysis Mimicking Pathologists' Diagnostic Logic. CoRR abs/2505.20510 (2025) - 2024
- [j3]Jingxiong Li
, Sunyi Zheng
, Zhongyi Shui
, Shichuan Zhang, Linyi Yang
, Yuxuan Sun, Yunlong Zhang, Honglin Li, Yuanxin Ye, Peter M. A. van Ooijen
, Kang Li
, Lin Yang:
Masked Conditional Variational Autoencoders for Chromosome Straightening. IEEE Trans. Medical Imaging 43(1): 216-228 (2024) - [c11]Yuxuan Sun, Chenglu Zhu, Sunyi Zheng
, Kai Zhang, Lin Sun, Zhongyi Shui, Yunlong Zhang, Honglin Li, Lin Yang:
PathAsst: A Generative Foundation AI Assistant towards Artificial General Intelligence of Pathology. AAAI 2024: 5034-5042 - [c10]Zhongyi Shui, Yunlong Zhang, Kai Yao, Chenglu Zhu, Sunyi Zheng
, Jingxiong Li, Honglin Li, Yuxuan Sun, Ruizhe Guo, Lin Yang:
Unleashing the Power of Prompt-Driven Nucleus Instance Segmentation. ECCV (27) 2024: 288-304 - [c7]Jingxiong Li
, Sunyi Zheng
, Chenglu Zhu
, Yuxuan Sun
, Pingyi Chen
, Zhongyi Shui
, Yunlong Zhang
, Honglin Li
, Lin Yang
:
PathUp: Patch-wise Timestep Tracking for Multi-class Large Pathology Image Synthesising Diffusion Model. ACM Multimedia 2024: 3984-3993 - [i15]Yuxuan Sun, Yunlong Zhang, Yixuan Si, Chenglu Zhu, Zhongyi Shui, Kai Zhang, Jingxiong Li, Xingheng Lyu, Tao Lin, Lin Yang:
PathGen-1.6M: 1.6 Million Pathology Image-text Pairs Generation through Multi-agent Collaboration. CoRR abs/2407.00203 (2024) - [i14]Honglin Li, Yuxuan Sun, Chenglu Zhu, Yunlong Zhang, Shichuan Zhang, Zhongyi Shui, Pingyi Chen, Jingxiong Li, Sunyi Zheng
, Can Cui, Lin Yang:
Large-scale cervical precancerous screening via AI-assisted cytology whole slide image analysis. CoRR abs/2407.19512 (2024) - [i12]Yuxuan Sun, Yixuan Si, Chenglu Zhu, Xuan Gong, Kai Zhang, Pingyi Chen, Ye Zhang, Zhongyi Shui, Tao Lin, Lin Yang:
CPath-Omni: A Unified Multimodal Foundation Model for Patch and Whole Slide Image Analysis in Computational Pathology. CoRR abs/2412.12077 (2024) - 2023
- [c4]Honglin Li, Chenglu Zhu, Yunlong Zhang, Yuxuan Sun, Zhongyi Shui, Wenwei Kuang, Sunyi Zheng
, Lin Yang:
Task-Specific Fine-Tuning via Variational Information Bottleneck for Weakly-Supervised Pathology Whole Slide Image Classification. CVPR 2023: 7454-7463 - [i10]Honglin Li, Chenglu Zhu, Yunlong Zhang, Yuxuan Sun, Zhongyi Shui, Wenwei Kuang, Sunyi Zheng
, Lin Yang:
Task-specific Fine-tuning via Variational Information Bottleneck for Weakly-supervised Pathology Whole Slide Image Classification. CoRR abs/2303.08446 (2023) - [i9]Yuxuan Sun, Chenglu Zhu, Sunyi Zheng
, Kai Zhang, Zhongyi Shui, Xiaoxuan Yu, Yizhi Zhao, Honglin Li, Yunlong Zhang, Ruojia Zhao, Xinheng Lyu, Lin Yang:
PathAsst: Redefining Pathology through Generative Foundation AI Assistant for Pathology. CoRR abs/2305.15072 (2023) - [i7]Jingxiong Li, Sunyi Zheng, Zhongyi Shui, Shichuan Zhang, Linyi Yang, Yuxuan Sun, Yunlong Zhang, Honglin Li, Yuanxin Ye, Peter M. A. van Ooijen, Kang Li, Lin Yang:
Masked conditional variational autoencoders for chromosome straightening. CoRR abs/2306.14129 (2023) - [i5]Yunlong Zhang, Yuxuan Sun, Sunyi Zheng
, Zhongyi Shui, Chenglu Zhu, Lin Yang:
Test-Time Training for Semantic Segmentation with Output Contrastive Loss. CoRR abs/2311.07877 (2023) - [i4]Zhongyi Shui, Yunlong Zhang, Kai Yao, Chenglu Zhu, Yuxuan Sun, Lin Yang:
Unleashing the Power of Prompt-driven Nucleus Instance Segmentation. CoRR abs/2311.15939 (2023)

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