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ORCIDAnastasia Krithara
- > Home > Persons > Anastasia Krithara
Publications
- 2025
[c45]Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Martin Krallinger, Miguel Rodríguez-Ortega, Natalia V. Loukachevitch, Andrey Sakhovskiy, Elena Tutubalina, Grigorios Tsoumakas, George Giannakoulas, Alexandra Bekiaridou, Athanasios Samaras, Giorgio Maria Di Nunzio, Nicola Ferro, Stefano Marchesin, Laura Menotti, Gianmaria Silvello, Georgios Paliouras:
BioASQ at CLEF2025: The Thirteenth Edition of the Large-Scale Biomedical Semantic Indexing and Question Answering Challenge. ECIR (5) 2025: 407-415- 2024
- [j14]Anastasia Krithara
, Anastasios Nentidis, Eirini Vandorou, Georgios Katsimpras, Yannis Almirantis, Magda Arnal, Adomas Bunevicius, Eulàlia Farré-Maduell, Maya Kassiss, Vasileios Konstantakos, Sherri Matis-Mitchell, Dimitris Polychronopoulos, Jesus Rodriguez-Pascual, Eleftherios Samaras, Martina Samiotaki, Despina Sanoudou, Aspasia Vozi, Georgios Paliouras:
BioASQ Synergy: a dialogue between question-answering systems and biomedical experts for promoting COVID-19 research. J. Am. Medical Informatics Assoc. 31(11): 2689-2698 (2024) - [c44]Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Georgios Paliouras:
Overview of BioASQ Tasks 12b and Synergy12 in CLEF2024. CLEF (Working Notes) 2024: 1-7 - [c43]Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Salvador Lima-López, Eulàlia Farré-Maduell, Martin Krallinger, Natalia V. Loukachevitch, Vera Davydova, Elena Tutubalina, Georgios Paliouras:
Overview of BioASQ 2024: The Twelfth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CLEF (2) 2024: 3-27 - [c42]Salvador Lima-López, Eulàlia Farré-Maduell, Jan Rodríguez-Miret, Miguel Rodríguez-Ortega, Livia Lilli, Jacopo Lenkowicz, Giovanna Ceroni, Jonathan Kossof, Anoop Shah, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger:
Overview of MultiCardioNER task at BioASQ 2024 on Medical Specialty and Language Adaptation of Clinical NER Systems for Spanish, English and Italian. CLEF (Working Notes) 2024: 8-27 - [c41]Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras:
Zero-Shot Relabeling of Weak Labels for Fine-Grained Semantic Indexing of Biomedical Literature. ECAI 2024: 2178-2185 - [c40]Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Martin Krallinger, Luis Gascó Sánchez, Salvador Lima-López, Eulàlia Farré, Natalia V. Loukachevitch, Vera Davydova, Elena Tutubalina:
BioASQ at CLEF2024: The Twelfth Edition of the Large-Scale Biomedical Semantic Indexing and Question Answering Challenge. ECIR (5) 2024: 490-497 - [i13]Anastasia Krithara, Fotis Aisopos, Vassiliki Rentoumi, Anastasios Nentidis, Konstantinos Bougiatiotis, Maria-Esther Vidal, Ernestina Menasalvas, Alejandro Rodríguez González, Eleftherios Samaras, Peter Garrard, Maria Torrente, Mariano Provencio Pulla, Nikos Dimakopoulos, Rui Mauricio, Jordi Rambla De Argila, Gian Gaetano Tartaglia, George Paliouras:
iASiS: Towards Heterogeneous Big Data Analysis for Personalized Medicine. CoRR abs/2407.06748 (2024) - 2023
- [j13]Anastasia Krithara, James G. Mork, Anastasios Nentidis, Georgios Paliouras:
The road from manual to automatic semantic indexing of biomedical literature: a 10 years journey. Frontiers Res. Metrics Anal. 8 (2023) - [j12]Anastasios Nentidis, Thomas Chatzopoulos, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras:
Large-scale investigation of weakly-supervised deep learning for the fine-grained semantic indexing of biomedical literature. J. Biomed. Informatics 146: 104499 (2023) - [c39]Salvador Lima-López, Eulàlia Farré-Maduell, Luis Gascó, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger:
Overview of MedProcNER Task on Medical Procedure Detection and Entity Linking at BioASQ 2023. CLEF (Working Notes) 2023: 1-18 - [c38]Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Georgios Paliouras:
Overview of BioASQ Tasks 11b and Synergy11 in CLEF2023. CLEF (Working Notes) 2023: 19-26 - [c37]Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Salvador Lima-López, Eulàlia Farré-Maduell, Luis Gascó, Martin Krallinger, Georgios Paliouras:
Overview of BioASQ 2023: The Eleventh BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CLEF 2023: 227-250 - [c36]Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Eulàlia Farré-Maduell, Salvador Lima-López, Martin Krallinger:
BioASQ at CLEF2023: The Eleventh Edition of the Large-Scale Biomedical Semantic Indexing and Question Answering Challenge. ECIR (3) 2023: 577-584 - [i12]Anastasios Nentidis, Thomas Chatzopoulos, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras:
Large-scale fine-grained semantic indexing of biomedical literature based on weakly-supervised deep learning. CoRR abs/2301.09350 (2023) - [i11]Anastasios Nentidis, Georgios Katsimpras, Anastasia Krithara, Salvador Lima-López, Eulàlia Farré-Maduell, Luis Gascó, Martin Krallinger, Georgios Paliouras:
Overview of BioASQ 2023: The eleventh BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CoRR abs/2307.05131 (2023) - 2022
- [j10]Vasileios Konstantakos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras:
CRISPRedict: a CRISPR-Cas9 web tool for interpretable efficiency predictions. Nucleic Acids Res. 50(W1): 191-198 (2022) - [c35]Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Georgios Paliouras:
Overview of BioASQ Tasks 10a, 10b and Synergy10 in CLEF2022. CLEF (Working Notes) 2022: 171-178 - [c34]Antonio Miranda-Escalada, Luis Gascó, Salvador Lima-López, Eulàlia Farré-Maduell, Darryl Estrada, Anastasios Nentidis, Anastasia Krithara, Georgios Katsimpras, Georgios Paliouras, Martin Krallinger:
Overview of DisTEMIST at BioASQ: Automatic detection and normalization of diseases from clinical texts: results, methods, evaluation and multilingual resources. CLEF (Working Notes) 2022: 179-203 - [c33]Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Antonio Miranda-Escalada, Luis Gascó, Martin Krallinger, Georgios Paliouras:
Overview of BioASQ 2022: The Tenth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CLEF 2022: 337-361 - [c32]Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras, Luis Gascó, Martin Krallinger:
BioASQ at CLEF2022: The Tenth Edition of the Large-scale Biomedical Semantic Indexing and Question Answering Challenge. ECIR (2) 2022: 429-435 - [c31]Eleni Koutsoni, Vasileios Konstantakos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras:
Modeling the off-target effects of CRISPR-Cas9 experiments for the treatment of Duchenne Muscular Dystrophy. SETN 2022: 6:1-6:7 - [i9]Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Antonio Miranda-Escalada, Luis Gascó, Martin Krallinger, Georgios Paliouras:
Overview of BioASQ 2022: The tenth BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CoRR abs/2210.06852 (2022) - 2021
- [j9]Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras:
What is all this new MeSH about? Int. J. Digit. Libr. 22(4): 319-337 (2021) - [c30]Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Georgios Paliouras:
Overview of BioASQ Tasks 9a, 9b and Synergy in CLEF2021. CLEF (Working Notes) 2021: 157-164 - [c29]Luis Gascó, Anastasios Nentidis, Anastasia Krithara, Darryl Estrada-Zavala, Renato Toshiyuki Murasaki, Elena Primo-Peña, Cristina Bojo-Canales, Georgios Paliouras, Martin Krallinger:
Overview of BioASQ 2021-MESINESP track. Evaluation of advance hierarchical classification techniques for scientific literature, patents and clinical trials. CLEF (Working Notes) 2021: 165-187 - [c28]Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Luis Gascó, Martin Krallinger, Georgios Paliouras:
Overview of BioASQ 2021: The Ninth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CLEF 2021: 239-263 - [c27]Anastasia Krithara, Anastasios Nentidis, Georgios Paliouras, Martin Krallinger, Antonio Miranda:
BioASQ at CLEF2021: Large-Scale Biomedical Semantic Indexing and Question Answering. ECIR (2) 2021: 624-630 - [i8]Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras:
What is all this new MeSH about? Exploring the semantic provenance of new descriptors in the MeSH thesaurus. CoRR abs/2101.08293 (2021) - [i7]Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras:
Harvesting the Public MeSH Note field. CoRR abs/2106.00302 (2021) - [i6]Anastasios Nentidis, Anastasia Krithara, Konstantinos Bougiatiotis, Martin Krallinger, Carlos Rodríguez Penagos, Marta Villegas, Georgios Paliouras:
Overview of BioASQ 2020: The eighth BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CoRR abs/2106.14618 (2021) - [i5]Anastasios Nentidis, Georgios Katsimpras, Eirini Vandorou, Anastasia Krithara, Luis Gascó, Martin Krallinger, Georgios Paliouras:
Overview of BioASQ 2021: The ninth BioASQ challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CoRR abs/2106.14885 (2021) - 2020
- [j8]Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras:
Beyond MeSH: Fine-grained semantic indexing of biomedical literature based on weak supervision. Inf. Process. Manag. 57(5): 102282 (2020) - [c26]Konstantinos Bougiatiotis, Fotis Aisopos, Anastasios Nentidis, Anastasia Krithara, Georgios Paliouras:
Drug-Drug Interaction Prediction on a Biomedical Literature Knowledge Graph. AIME 2020: 122-132 - [c25]Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras:
iASiS Open Data Graph: Automated Semantic Integration of Disease-Specific Knowledge. CBMS 2020: 220-225 - [c24]Anastasios Nentidis, Anastasia Krithara, Konstantinos Bougiatiotis, Martin Krallinger, Carlos Rodríguez Penagos, Marta Villegas, Georgios Paliouras:
Overview of BioASQ 2020: The Eighth BioASQ Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. CLEF 2020: 194-214 - [c23]Anastasios Nentidis, Anastasia Krithara, Konstantinos Bougiatiotis, Georgios Paliouras:
Overview of BioASQ 8a and 8b: Results of the Eighth Edition of the BioASQ Tasks a and b. CLEF (Working Notes) 2020 - [c22]Carlos Rodríguez Penagos, Anastasios Nentidis, Aitor Gonzalez-Agirre, Alejandro Asensio, Jordi Armengol-Estapé, Anastasia Krithara, Marta Villegas, Georgios Paliouras, Martin Krallinger:
Overview of MESINESP, a Spanish Medical Semantic Indexing Task within BioASQ 2020. CLEF (Working Notes) 2020 - [c21]Martin Krallinger, Anastasia Krithara, Anastasios Nentidis, Georgios Paliouras, Marta Villegas:
BioASQ at CLEF2020: Large-Scale Biomedical Semantic Indexing and Question Answering. ECIR (2) 2020: 550-556 - [i4]Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras:
Beyond MeSH: Fine-Grained Semantic Indexing of Biomedical Literature based on Weak Supervision. CoRR abs/2005.07638 (2020) - [i3]Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras:
Results of the seventh edition of the BioASQ Challenge. CoRR abs/2006.09174 (2020) - 2019
- [c19]Anastasia Krithara, Fotis Aisopos, Vassiliki Rentoumi, Anastasios Nentidis, Konstantinos Bougiatiotis, Maria-Esther Vidal, Ernestina Menasalvas, Alejandro Rodríguez González, Eleftherios Samaras, Peter Garrard, Maria Torrente, Mariano Provencio Pulla, Nikos Dimakopoulos, Rui Mauricio, Jordi Rambla De Argila, Gian Gaetano Tartaglia, George Paliouras:
iASiS: Towards Heterogeneous Big Data Analysis for Personalized Medicine. CBMS 2019: 106-111 - [c18]Anastasios Nentidis, Anastasia Krithara, Grigorios Tsoumakas, Georgios Paliouras:
Beyond MeSH: Fine-Grained Semantic Indexing of Biomedical Literature Based on Weak Supervision. CBMS 2019: 180-185 - [c17]Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras:
Results of the Seventh Edition of the BioASQ Challenge. PKDD/ECML Workshops (2) 2019: 553-568 - [i2]Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras:
Semantic integration of disease-specific knowledge. CoRR abs/1912.08633 (2019) - 2017
- [c16]Anastasios Nentidis, Konstantinos Bougiatiotis, Anastasia Krithara, Georgios Paliouras, Ioannis A. Kakadiaris:
Results of the fifth edition of the BioASQ Challenge. BioNLP 2017: 48-57
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