New developments in the InterPro database. - Mulder, Nicola J.; Apweiler, Rolf; Attwood, Teresa K.; Bairoch, Amos; Bateman, Alex; Binns, David; Bork, Peer; Buillard, Virginie; Cerutti, Lorenzo; Copley, Richard R.; Courcelle, Emmanuel; Das, Ujjwal; et al. (Nucleic Acids Res., 2007)

InterPro, progress and status in 2005. - Mulder, Nicola J.; Apweiler, Rolf; Attwood, Teresa K.; Bairoch, Amos; Bateman, Alex; Binns, David; Bradley, Paul; Bork, Peer; Bucher, Phillip; Cerutti, Lorenzo; Copley, Richard R.; Courcelle, Emmanuel; et al. (Nucleic Acids Res., 2005)

UniProt archive. - Leinonen, Rasko; Diez, Federico Garcia; Binns, David; Fleischmann, Wolfgang; Lopez, Rodrigo; Apweiler, Rolf (Bioinform., 2004)

IntEnz, the integrated relational enzyme database. - Fleischmann, Astrid; Darsow, Michael; Degtyarenko, Kirill; Fleischmann, Wolfgang; Boyce, Sinéad; Axelsen, Kristian B.; Bairoch, Amos; Schomburg, Dietmar; Tipton, Keith F.; Apweiler, Rolf (Nucleic Acids Res., 2004)

The InterPro Database, 2003 brings increased coverage and new features. - Mulder, Nicola J.; Apweiler, Rolf; Attwood, Terri K.; Bairoch, Amos; Barrell, Daniel; Bateman, Alex; Binns, David; Biswas, Margaret; Bradley, Paul; Bork, Peer; Bucher, Philipp; Copley, Richard R.; et al. (Nucleic Acids Res., 2003)

The Proteome Analysis database: a tool for the in silico analysis of whole proteomes. - Pruess, Manuela; Fleischmann, Wolfgang; Kanapin, Alexander; Karavidopoulou, Youla; Kersey, Paul J.; Kriventseva, Evgenia V.; Mittard, Virginie; Mulder, Nicola J.; Phan, Isabelle; Servant, Florence; Apweiler, Rolf (Nucleic Acids Res., 2003)

NEWT, a new taxonomy portal. - Phan, I. Q. H.; Pilbout, Sandrine; Fleischmann, Wolfgang; Bairoch, Amos (Nucleic Acids Res., 2003)

InterPro: An Integrated Documentation Resource for Protein Families, Domains and Functional Sites - Mulder, Nicola J.; Apweiler, Rolf; Attwood, Terri K.; Bairoch, Amos; Bateman, Alex; Binns, David; Biswas, Margaret; Bradley, Paul; Bork, Peer; Bucher, Philipp; Copley, Richard R.; Courcelle, Emmanuel; et al. (Briefings Bioinform., 2002)

Interactive InterPro-based comparisons of proteins in whole genomes. - Kanapin, Alexander; Apweiler, Rolf; Biswas, Margaret; Fleischmann, Wolfgang; Karavidopoulou, Youla; Kersey, Paul J.; Kriventseva, Evgenia V.; Mittard, Virginie; Mulder, Nicola J.; Oinn, Thomas M.; Phan, Isabelle; Servant, Florence; et al. (Bioinform., 2002)

Automation of Protein Sequence Characterization and Its Application in Whole Proteome Analysis. - Apweiler, Rolf; Biswas, Margaret; Fleischmann, Wolfgang; Kriventseva, Evgenia V.; Mulder, Nicola J. (2002)

Automatic rule generation for protein annotation with the C4.5 data mining algorithm applied on SWISS-PROT. - Kretschmann, Ernst; Fleischmann, Wolfgang; Apweiler, Rolf (Bioinform., 2001)

CluSTr: a database of clusters of SWISS-PROT+TrEMBL proteins. - Kriventseva, Evgenia V.; Fleischmann, Wolfgang; Zdobnov, Evgeni M.; Apweiler, Rolf (Nucleic Acids Res., 2001)

The InterPro database, an integrated documentation resource for protein families, domains and functional sites. - Apweiler, Rolf; Attwood, Terri K.; Bairoch, Amos; Bateman, Alex; Birney, Ewan; Biswas, Margaret; Bucher, Philipp; Cerutti, Lorenzo; Corpet, Florence; Croning, Michael D. R.; Durbin, Richard; Falquet, Laurent; et al. (Nucleic Acids Res., 2001)

Proteome Analysis Database: online application of InterPro and CluSTr for the functional classification of proteins in whole genomes. - Apweiler, Rolf; Biswas, Margaret; Fleischmann, Wolfgang; Kanapin, Alexander; Karavidopoulou, Youla; Kersey, Paul J.; Kriventseva, Evgenia V.; Mittard, Virginie; Mulder, Nicola J.; Phan, Isabelle; Zdobnov, Evgeni M. (Nucleic Acids Res., 2001)

InterPro-an integrated documentation resource for protein families, domains and functional sites. - Apweiler, Rolf; Attwood, Terri K.; Bairoch, Amos; Bateman, Alex; Birney, Ewan; Biswas, Margaret; Bucher, Philipp; Cerutti, Lorenzo; Corpet, Florence; Croning, Michael D. R.; Durbin, Richard; Falquet, Laurent; et al. (Bioinform., 2000)

Proteome Analysis: Application of InterPro and CluSTr for the Functional Classification of Proteins in Whole Genomes. - Biswas, Margaret; Apweiler, Rolf; Fleischmann, Wolfgang; Kanapin, Alexander; Karavidopoulou, Youla; Kersey, Paul J.; Kriventseva, Evgenia V.; Mittard, Virginie; Mulder, Nicola J.; Oinn, Thomas M.; Phan, Isabelle; Zdobnov, Evgeni M. (2000)

EDITtoTrEMBL: a distributed approach to high-quality automated protein sequence annotation. - Möller, Steffen; Leser, Ulf; Fleischmann, Wolfgang; Apweiler, Rolf (Bioinform., 1999)

A novel method for automatic functional annotation of proteins. - Fleischmann, Wolfgang; Möller, Steffen; Gateau, Alain; Apweiler, Rolf (Bioinform., 1999)

Swissknife - 'lazy parsing' of SWISS-PROT entries. - Hermjakob, Henning; Fleischmann, Wolfgang; Apweiler, Rolf (Bioinform., 1999)

A novel method for automatic and reliable functional annotation of proteins. - Fleischmann, Wolfgang; Möller, Steffen; Gateau, Alain; Apweiler, Rolf (1998)

EDITtoTrEMBL: A distributed approach to high-quality automated protein sequence annotation. - Möller, Steffen; Leser, Ulf; Fleischmann, Wolfgang; Apweiler, Rolf (1998)