BibTeX records: Xia Ning

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@article{DBLP:journals/ijgi/TangZDTYXN25,
  author       = {Jianbo Tang and
                  Tianyu Zhang and
                  Junjie Ding and
                  Ke Tao and
                  Chen Yang and
                  Jianbing Xiang and
                  Xia Ning},
  title        = {Three-Dimensional Outdoor Pedestrian Road Network Map Construction
                  Based on Crowdsourced Trajectory Data},
  journal      = {{ISPRS} Int. J. Geo Inf.},
  volume       = {14},
  number       = {4},
  pages        = {175},
  year         = {2025},
  url          = {https://doi.org/10.3390/ijgi14040175},
  doi          = {10.3390/IJGI14040175},
  timestamp    = {Fri, 09 May 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijgi/TangZDTYXN25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmi/AllenPPNS25,
  author       = {Katie S. Allen and
                  Seho Park and
                  John Price and
                  Xia Ning and
                  Titus Schleyer},
  title        = {Using a statewide health information exchange to enhance {COVID} research
                  and surveillance: The impact of information fragmentation},
  journal      = {Int. J. Medical Informatics},
  volume       = {203},
  pages        = {105971},
  year         = {2025},
  url          = {https://doi.org/10.1016/j.ijmedinf.2025.105971},
  doi          = {10.1016/J.IJMEDINF.2025.105971},
  timestamp    = {Wed, 02 Jul 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijmi/AllenPPNS25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl/DuPN25,
  author       = {Hanwen Du and
                  Bo Peng and
                  Xia Ning},
  editor       = {Wanxiang Che and
                  Joyce Nabende and
                  Ekaterina Shutova and
                  Mohammad Taher Pilehvar},
  title        = {Planning with Diffusion Models for Target-Oriented Dialogue Systems},
  booktitle    = {Proceedings of the 63rd Annual Meeting of the Association for Computational
                  Linguistics (Volume 1: Long Papers), {ACL} 2025, Vienna, Austria,
                  July 27 - August 1, 2025},
  pages        = {20307--20329},
  publisher    = {Association for Computational Linguistics},
  year         = {2025},
  url          = {https://aclanthology.org/2025.acl-long.993/},
  timestamp    = {Thu, 24 Jul 2025 21:25:39 +0200},
  biburl       = {https://dblp.org/rec/conf/acl/DuPN25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl/DeyHN25,
  author       = {Vishal Dey and
                  Xiao Hu and
                  Xia Ning},
  editor       = {Wanxiang Che and
                  Joyce Nabende and
                  Ekaterina Shutova and
                  Mohammad Taher Pilehvar},
  title        = {{\textbackslash}mathttGeLLM{\({^3}\)}O: Generalizing Large Language
                  Models for Multi-property Molecule Optimization},
  booktitle    = {Proceedings of the 63rd Annual Meeting of the Association for Computational
                  Linguistics (Volume 1: Long Papers), {ACL} 2025, Vienna, Austria,
                  July 27 - August 1, 2025},
  pages        = {25192--25221},
  publisher    = {Association for Computational Linguistics},
  year         = {2025},
  url          = {https://aclanthology.org/2025.acl-long.1225/},
  timestamp    = {Thu, 24 Jul 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/acl/DeyHN25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iclr/ChenCNZWYLLWLDX25,
  author       = {Ziru Chen and
                  Shijie Chen and
                  Yuting Ning and
                  Qianheng Zhang and
                  Boshi Wang and
                  Botao Yu and
                  Yifei Li and
                  Zeyi Liao and
                  Chen Wei and
                  Zitong Lu and
                  Vishal Dey and
                  Mingyi Xue and
                  Frazier N. Baker and
                  Benjamin Burns and
                  Daniel Adu{-}Ampratwum and
                  Xuhui Huang and
                  Xia Ning and
                  Song Gao and
                  Yu Su and
                  Huan Sun},
  title        = {ScienceAgentBench: Toward Rigorous Assessment of Language Agents for
                  Data-Driven Scientific Discovery},
  booktitle    = {The Thirteenth International Conference on Learning Representations,
                  {ICLR} 2025, Singapore, April 24-28, 2025},
  publisher    = {OpenReview.net},
  year         = {2025},
  url          = {https://openreview.net/forum?id=6z4YKr0GK6},
  timestamp    = {Tue, 01 Jul 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/iclr/ChenCNZWYLLWLDX25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/naacl/DuPN25,
  author       = {Hanwen Du and
                  Bo Peng and
                  Xia Ning},
  editor       = {Luis Chiruzzo and
                  Alan Ritter and
                  Lu Wang},
  title        = {{SAPIENT:} Mastering Multi-turn Conversational Recommendation with
                  Strategic Planning and Monte Carlo Tree Search},
  booktitle    = {Proceedings of the 2025 Conference of the Nations of the Americas
                  Chapter of the Association for Computational Linguistics: Human Language
                  Technologies, {NAACL} 2025 - Volume 1: Long Papers, Albuquerque, New
                  Mexico, USA, April 29 - May 4, 2025},
  pages        = {2629--2648},
  publisher    = {Association for Computational Linguistics},
  year         = {2025},
  url          = {https://doi.org/10.18653/v1/2025.naacl-long.133},
  doi          = {10.18653/V1/2025.NAACL-LONG.133},
  timestamp    = {Thu, 14 Aug 2025 11:28:41 +0200},
  biburl       = {https://dblp.org/rec/conf/naacl/DuPN25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/naacl/AverlyN25,
  author       = {Reza Averly and
                  Xia Ning},
  editor       = {Luis Chiruzzo and
                  Alan Ritter and
                  Lu Wang},
  title        = {Entity Decomposition with Filtering: {A} Zero-Shot Clinical Named
                  Entity Recognition Framework},
  booktitle    = {Proceedings of the 2025 Conference of the Nations of the Americas
                  Chapter of the Association for Computational Linguistics: Human Language
                  Technologies, {NAACL} 2025 - Volume 1: Long Papers, Albuquerque, New
                  Mexico, USA, April 29 - May 4, 2025},
  pages        = {2935--2951},
  publisher    = {Association for Computational Linguistics},
  year         = {2025},
  url          = {https://doi.org/10.18653/v1/2025.naacl-long.150},
  doi          = {10.18653/V1/2025.NAACL-LONG.150},
  timestamp    = {Fri, 13 Jun 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/naacl/AverlyN25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/naacl/YuBCHGANS25,
  author       = {Botao Yu and
                  Frazier N. Baker and
                  Ziru Chen and
                  Garrett Herb and
                  Boyu Gou and
                  Daniel Adu{-}Ampratwum and
                  Xia Ning and
                  Huan Sun},
  editor       = {Luis Chiruzzo and
                  Alan Ritter and
                  Lu Wang},
  title        = {Tooling or Not Tooling? The Impact of Tools on Language Agents for
                  Chemistry Problem Solving},
  booktitle    = {Findings of the Association for Computational Linguistics: {NAACL}
                  2025, Albuquerque, New Mexico, USA, April 29 - May 4, 2025},
  pages        = {7620--7640},
  publisher    = {Association for Computational Linguistics},
  year         = {2025},
  url          = {https://doi.org/10.18653/v1/2025.findings-naacl.424},
  doi          = {10.18653/V1/2025.FINDINGS-NAACL.424},
  timestamp    = {Thu, 14 Aug 2025 11:29:01 +0200},
  biburl       = {https://dblp.org/rec/conf/naacl/YuBCHGANS25.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2502-06027,
  author       = {Ziqi Chen and
                  Bo Peng and
                  Tianhua Zhai and
                  Daniel Adu{-}Ampratwum and
                  Xia Ning},
  title        = {Generating 3D Binding Molecules Using Shape-Conditioned Diffusion
                  Models with Guidance},
  journal      = {CoRR},
  volume       = {abs/2502.06027},
  year         = {2025},
  url          = {https://doi.org/10.48550/arXiv.2502.06027},
  doi          = {10.48550/ARXIV.2502.06027},
  eprinttype    = {arXiv},
  eprint       = {2502.06027},
  timestamp    = {Wed, 12 Mar 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2502-06027.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2502-13398,
  author       = {Vishal Dey and
                  Xiao Hu and
                  Xia Ning},
  title        = {GeLLM\({}^{\mbox{3}}\)O: Generalizing Large Language Models for Multi-property
                  Molecule Optimization},
  journal      = {CoRR},
  volume       = {abs/2502.13398},
  year         = {2025},
  url          = {https://doi.org/10.48550/arXiv.2502.13398},
  doi          = {10.48550/ARXIV.2502.13398},
  eprinttype    = {arXiv},
  eprint       = {2502.13398},
  timestamp    = {Fri, 04 Jul 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2502-13398.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2502-13959,
  author       = {Reza Averly and
                  Frazier N. Baker and
                  Xia Ning},
  title        = {{LIDDIA:} Language-based Intelligent Drug Discovery Agent},
  journal      = {CoRR},
  volume       = {abs/2502.13959},
  year         = {2025},
  url          = {https://doi.org/10.48550/arXiv.2502.13959},
  doi          = {10.48550/ARXIV.2502.13959},
  eprinttype    = {arXiv},
  eprint       = {2502.13959},
  timestamp    = {Wed, 19 Mar 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2502-13959.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2504-16858,
  author       = {Hanwen Du and
                  Bo Peng and
                  Xia Ning},
  title        = {Planning with Diffusion Models for Target-Oriented Dialogue Systems},
  journal      = {CoRR},
  volume       = {abs/2504.16858},
  year         = {2025},
  url          = {https://doi.org/10.48550/arXiv.2504.16858},
  doi          = {10.48550/ARXIV.2504.16858},
  eprinttype    = {arXiv},
  eprint       = {2504.16858},
  timestamp    = {Fri, 23 May 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2504-16858.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2505-17316,
  author       = {Jiachen Jiang and
                  Jinxin Zhou and
                  Bo Peng and
                  Xia Ning and
                  Zhihui Zhu},
  title        = {Analyzing Fine-Grained Alignment and Enhancing Vision Understanding
                  in Multimodal Language Models},
  journal      = {CoRR},
  volume       = {abs/2505.17316},
  year         = {2025},
  url          = {https://doi.org/10.48550/arXiv.2505.17316},
  doi          = {10.48550/ARXIV.2505.17316},
  eprinttype    = {arXiv},
  eprint       = {2505.17316},
  timestamp    = {Thu, 26 Jun 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2505-17316.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2505-23721,
  author       = {Sean Current and
                  Ziqi Chen and
                  Daniel Adu{-}Ampratwum and
                  Xia Ning and
                  Srinivasan Parthasarathy},
  title        = {DiffER: Categorical Diffusion for Chemical Retrosynthesis},
  journal      = {CoRR},
  volume       = {abs/2505.23721},
  year         = {2025},
  url          = {https://doi.org/10.48550/arXiv.2505.23721},
  doi          = {10.48550/ARXIV.2505.23721},
  eprinttype    = {arXiv},
  eprint       = {2505.23721},
  timestamp    = {Sun, 29 Jun 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2505-23721.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2505-23987,
  author       = {Vishal Dey and
                  Xiao Hu and
                  Xia Ning},
  title        = {Large Language Models for Controllable Multi-property Multi-objective
                  Molecule Optimization},
  journal      = {CoRR},
  volume       = {abs/2505.23987},
  year         = {2025},
  url          = {https://doi.org/10.48550/arXiv.2505.23987},
  doi          = {10.48550/ARXIV.2505.23987},
  eprinttype    = {arXiv},
  eprint       = {2505.23987},
  timestamp    = {Fri, 04 Jul 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2505-23987.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2506-08140,
  author       = {Yifei Li and
                  Hanane Nour Moussa and
                  Ziru Chen and
                  Shijie Chen and
                  Botao Yu and
                  Mingyi Xue and
                  Benjamin Burns and
                  Tzu{-}Yao Chiu and
                  Vishal Dey and
                  Zitong Lu and
                  Chen Wei and
                  Qianheng Zhang and
                  Tianyu Zhang and
                  Song Gao and
                  Xuhui Huang and
                  Xia Ning and
                  Nesreen K. Ahmed and
                  Ali Payani and
                  Huan Sun},
  title        = {AutoSDT: Scaling Data-Driven Discovery Tasks Toward Open Co-Scientists},
  journal      = {CoRR},
  volume       = {abs/2506.08140},
  year         = {2025},
  url          = {https://doi.org/10.48550/arXiv.2506.08140},
  doi          = {10.48550/ARXIV.2506.08140},
  eprinttype    = {arXiv},
  eprint       = {2506.08140},
  timestamp    = {Mon, 07 Jul 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2506-08140.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2506-09048,
  author       = {Yuxin Dong and
                  Jiachen Jiang and
                  Zhihui Zhu and
                  Xia Ning},
  title        = {Understanding Task Vectors in In-Context Learning: Emergence, Functionality,
                  and Limitations},
  journal      = {CoRR},
  volume       = {abs/2506.09048},
  year         = {2025},
  url          = {https://doi.org/10.48550/arXiv.2506.09048},
  doi          = {10.48550/ARXIV.2506.09048},
  eprinttype    = {arXiv},
  eprint       = {2506.09048},
  timestamp    = {Tue, 08 Jul 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2506-09048.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/datamine/PengPN24,
  author       = {Bo Peng and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {Intention enhanced mixed attentive model for session-based recommendation},
  journal      = {Data Min. Knowl. Discov.},
  volume       = {38},
  number       = {4},
  pages        = {2032--2061},
  year         = {2024},
  url          = {https://doi.org/10.1007/s10618-024-01023-0},
  doi          = {10.1007/S10618-024-01023-0},
  timestamp    = {Thu, 22 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/datamine/PengPN24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcheminf/DeyN24,
  author       = {Vishal Dey and
                  Xia Ning},
  title        = {Enhancing molecular property prediction with auxiliary learning and
                  task-specific adaptation},
  journal      = {J. Cheminformatics},
  volume       = {16},
  number       = {1},
  pages        = {85},
  year         = {2024},
  url          = {https://doi.org/10.1186/s13321-024-00880-7},
  doi          = {10.1186/S13321-024-00880-7},
  timestamp    = {Tue, 01 Apr 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcheminf/DeyN24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/DeyN24,
  author       = {Vishal Dey and
                  Xia Ning},
  title        = {Improving Anticancer Drug Selection and Prioritization via Neural
                  Learning to Rank},
  journal      = {J. Chem. Inf. Model.},
  volume       = {64},
  number       = {10},
  pages        = {4071--4088},
  year         = {2024},
  url          = {https://doi.org/10.1021/acs.jcim.3c01060},
  doi          = {10.1021/ACS.JCIM.3C01060},
  timestamp    = {Tue, 01 Apr 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/DeyN24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/BakerCAN24,
  author       = {Frazier N. Baker and
                  Ziqi Chen and
                  Daniel Adu{-}Ampratwum and
                  Xia Ning},
  title        = {RLSynC: Offline-Online Reinforcement Learning for Synthon Completion},
  journal      = {J. Chem. Inf. Model.},
  volume       = {64},
  number       = {17},
  pages        = {6723--6735},
  year         = {2024},
  url          = {https://doi.org/10.1021/acs.jcim.4c00554},
  doi          = {10.1021/ACS.JCIM.4C00554},
  timestamp    = {Mon, 09 Dec 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/BakerCAN24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/remotesensing/LuoZGHZYN24,
  author       = {Cheng Luo and
                  Yueting Zhang and
                  Jiayi Guo and
                  Yuxin Hu and
                  Guangyao Zhou and
                  Hongjian You and
                  Xia Ning},
  title        = {{SAR-CDSS:} {A} Semi-Supervised Cross-Domain Object Detection from
                  Optical to {SAR} Domain},
  journal      = {Remote. Sens.},
  volume       = {16},
  number       = {6},
  pages        = {940},
  year         = {2024},
  url          = {https://doi.org/10.3390/rs16060940},
  doi          = {10.3390/RS16060940},
  timestamp    = {Mon, 15 Apr 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/remotesensing/LuoZGHZYN24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tkdd/PengCPN24,
  author       = {Bo Peng and
                  Ziqi Chen and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {Modeling Sequences as Star Graphs to Address Over-Smoothing in Self-Attentive
                  Sequential Recommendation},
  journal      = {{ACM} Trans. Knowl. Discov. Data},
  volume       = {18},
  number       = {8},
  pages        = {207:1--207:24},
  year         = {2024},
  url          = {https://doi.org/10.1145/3676560},
  doi          = {10.1145/3676560},
  timestamp    = {Thu, 03 Oct 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tkdd/PengCPN24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icml/0009LC0N24,
  author       = {Bo Peng and
                  Xinyi Ling and
                  Ziru Chen and
                  Huan Sun and
                  Xia Ning},
  title        = {eCeLLM: Generalizing Large Language Models for E-commerce from Large-scale,
                  High-quality Instruction Data},
  booktitle    = {Forty-first International Conference on Machine Learning, {ICML} 2024,
                  Vienna, Austria, July 21-27, 2024},
  publisher    = {OpenReview.net},
  year         = {2024},
  url          = {https://openreview.net/forum?id=LWRI4uPG2X},
  timestamp    = {Mon, 02 Sep 2024 16:45:29 +0200},
  biburl       = {https://dblp.org/rec/conf/icml/0009LC0N24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2401-16299,
  author       = {Vishal Dey and
                  Xia Ning},
  title        = {Enhancing Molecular Property Prediction with Auxiliary Learning and
                  Task-Specific Adaptation},
  journal      = {CoRR},
  volume       = {abs/2401.16299},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2401.16299},
  doi          = {10.48550/ARXIV.2401.16299},
  eprinttype    = {arXiv},
  eprint       = {2401.16299},
  timestamp    = {Tue, 06 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2401-16299.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2402-08831,
  author       = {Bo Peng and
                  Xinyi Ling and
                  Ziru Chen and
                  Huan Sun and
                  Xia Ning},
  title        = {eCeLLM: Generalizing Large Language Models for E-commerce from Large-scale,
                  High-quality Instruction Data},
  journal      = {CoRR},
  volume       = {abs/2402.08831},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2402.08831},
  doi          = {10.48550/ARXIV.2402.08831},
  eprinttype    = {arXiv},
  eprint       = {2402.08831},
  timestamp    = {Mon, 26 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2402-08831.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2402-09391,
  author       = {Botao Yu and
                  Frazier N. Baker and
                  Ziqi Chen and
                  Xia Ning and
                  Huan Sun},
  title        = {LlaSMol: Advancing Large Language Models for Chemistry with a Large-Scale,
                  Comprehensive, High-Quality Instruction Tuning Dataset},
  journal      = {CoRR},
  volume       = {abs/2402.09391},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2402.09391},
  doi          = {10.48550/ARXIV.2402.09391},
  eprinttype    = {arXiv},
  eprint       = {2402.09391},
  timestamp    = {Thu, 14 Nov 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2402-09391.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2407-04629,
  author       = {Reza Averly and
                  Xia Ning},
  title        = {Entity Decomposition with Filtering: {A} Zero-Shot Clinical Named
                  Entity Recognition Framework},
  journal      = {CoRR},
  volume       = {abs/2407.04629},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2407.04629},
  doi          = {10.48550/ARXIV.2407.04629},
  eprinttype    = {arXiv},
  eprint       = {2407.04629},
  timestamp    = {Mon, 12 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2407-04629.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2410-05080,
  author       = {Ziru Chen and
                  Shijie Chen and
                  Yuting Ning and
                  Qianheng Zhang and
                  Boshi Wang and
                  Botao Yu and
                  Yifei Li and
                  Zeyi Liao and
                  Chen Wei and
                  Zitong Lu and
                  Vishal Dey and
                  Mingyi Xue and
                  Frazier N. Baker and
                  Benjamin Burns and
                  Daniel Adu{-}Ampratwum and
                  Xuhui Huang and
                  Xia Ning and
                  Song Gao and
                  Yu Su and
                  Huan Sun},
  title        = {ScienceAgentBench: Toward Rigorous Assessment of Language Agents for
                  Data-Driven Scientific Discovery},
  journal      = {CoRR},
  volume       = {abs/2410.05080},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2410.05080},
  doi          = {10.48550/ARXIV.2410.05080},
  eprinttype    = {arXiv},
  eprint       = {2410.05080},
  timestamp    = {Tue, 01 Jul 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2410-05080.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2410-09580,
  author       = {Hanwen Du and
                  Bo Peng and
                  Xia Ning},
  title        = {{SAPIENT:} Mastering Multi-turn Conversational Recommendation with
                  Strategic Planning and Monte Carlo Tree Search},
  journal      = {CoRR},
  volume       = {abs/2410.09580},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2410.09580},
  doi          = {10.48550/ARXIV.2410.09580},
  eprinttype    = {arXiv},
  eprint       = {2410.09580},
  timestamp    = {Fri, 22 Nov 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2410-09580.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2410-17337,
  author       = {Xinyi Ling and
                  Bo Peng and
                  Hanwen Du and
                  Zhihui Zhu and
                  Xia Ning},
  title        = {Captions Speak Louder than Images {(CASLIE):} Generalizing Foundation
                  Models for E-commerce from High-quality Multimodal Instruction Data},
  journal      = {CoRR},
  volume       = {abs/2410.17337},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2410.17337},
  doi          = {10.48550/ARXIV.2410.17337},
  eprinttype    = {arXiv},
  eprint       = {2410.17337},
  timestamp    = {Wed, 27 Nov 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2410-17337.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2411-03320,
  author       = {Xiao Hu and
                  Ziqi Chen and
                  Bo Peng and
                  Daniel Adu{-}Ampratwum and
                  Xia Ning},
  title        = {log-RRIM: Yield Prediction via Local-to-global Reaction Representation
                  Learning and Interaction Modeling},
  journal      = {CoRR},
  volume       = {abs/2411.03320},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2411.03320},
  doi          = {10.48550/ARXIV.2411.03320},
  eprinttype    = {arXiv},
  eprint       = {2411.03320},
  timestamp    = {Wed, 01 Jan 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2411-03320.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2411-07228,
  author       = {Botao Yu and
                  Frazier N. Baker and
                  Ziru Chen and
                  Garrett Herb and
                  Boyu Gou and
                  Daniel Adu{-}Ampratwum and
                  Xia Ning and
                  Huan Sun},
  title        = {Tooling or Not Tooling? The Impact of Tools on Language Agents for
                  Chemistry Problem Solving},
  journal      = {CoRR},
  volume       = {abs/2411.07228},
  year         = {2024},
  url          = {https://doi.org/10.48550/arXiv.2411.07228},
  doi          = {10.48550/ARXIV.2411.07228},
  eprinttype    = {arXiv},
  eprint       = {2411.07228},
  timestamp    = {Fri, 04 Jul 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2411-07228.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ChenZGECJGNCM23,
  author       = {Ziqi Chen and
                  Baoyi Zhang and
                  Hongyu Guo and
                  Prashant S. Emani and
                  Trevor Clancy and
                  Chongming Jiang and
                  Mark Gerstein and
                  Xia Ning and
                  Chao Cheng and
                  Martin Renqiang Min},
  title        = {Binding peptide generation for {MHC} Class {I} proteins with deep
                  reinforcement learning},
  journal      = {Bioinform.},
  volume       = {39},
  number       = {2},
  year         = {2023},
  url          = {https://doi.org/10.1093/bioinformatics/btad055},
  doi          = {10.1093/BIOINFORMATICS/BTAD055},
  timestamp    = {Mon, 03 Mar 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/ChenZGECJGNCM23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tkde/PengRPN23,
  author       = {Bo Peng and
                  Zhiyun Ren and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {M\({}^{\mbox{2}}\): Mixed Models With Preferences, Popularities and
                  Transitions for Next-Basket Recommendation},
  journal      = {{IEEE} Trans. Knowl. Data Eng.},
  volume       = {35},
  number       = {4},
  pages        = {4033--4046},
  year         = {2023},
  url          = {https://doi.org/10.1109/TKDE.2022.3142773},
  doi          = {10.1109/TKDE.2022.3142773},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tkde/PengRPN23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SahaSPN23,
  author       = {Arpita Saha and
                  Maggie Samaan and
                  Bo Peng and
                  Xia Ning},
  editor       = {May D. Wang and
                  Byung{-}Jun Yoon},
  title        = {A Multi-Layered {GRU} Model for {COVID-19} Patient Representation
                  and Phenotyping from Large-Scale {EHR} Data},
  booktitle    = {Proceedings of the 14th {ACM} International Conference on Bioinformatics,
                  Computational Biology, and Health Informatics, {BCB} 2023, Houston,
                  TX, USA, September 3-6, 2023},
  pages        = {21:1--21:6},
  publisher    = {{ACM}},
  year         = {2023},
  url          = {https://doi.org/10.1145/3584371.3612986},
  doi          = {10.1145/3584371.3612986},
  timestamp    = {Sun, 19 Jan 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bcb/SahaSPN23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/PengR0N23,
  author       = {Bo Peng and
                  Zhiyun Ren and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {{HAM:} Hybrid Associations Models for Sequential Recommendation (Extended
                  abstract)},
  booktitle    = {39th {IEEE} International Conference on Data Engineering, {ICDE} 2023,
                  Anaheim, CA, USA, April 3-7, 2023},
  pages        = {3873--3874},
  publisher    = {{IEEE}},
  year         = {2023},
  url          = {https://doi.org/10.1109/ICDE55515.2023.00363},
  doi          = {10.1109/ICDE55515.2023.00363},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icde/PengR0N23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/ChenMGCCN23,
  author       = {Ziqi Chen and
                  Martin Renqiang Min and
                  Hongyu Guo and
                  Chao Cheng and
                  Trevor Clancy and
                  Xia Ning},
  editor       = {Haixu Tang},
  title        = {T-Cell Receptor Optimization with Reinforcement Learning and Mutation
                  Polices for Precision Immunotherapy},
  booktitle    = {Research in Computational Molecular Biology - 27th Annual International
                  Conference, {RECOMB} 2023, Istanbul, Turkey, April 16-19, 2023, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {13976},
  pages        = {174--191},
  publisher    = {Springer},
  year         = {2023},
  url          = {https://doi.org/10.1007/978-3-031-29119-7\_11},
  doi          = {10.1007/978-3-031-29119-7\_11},
  timestamp    = {Sun, 06 Oct 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/ChenMGCCN23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2303-02162,
  author       = {Ziqi Chen and
                  Martin Renqiang Min and
                  Hongyu Guo and
                  Chao Cheng and
                  Trevor Clancy and
                  Xia Ning},
  title        = {T-Cell Receptor Optimization with Reinforcement Learning and Mutation
                  Policies for Precesion Immunotherapy},
  journal      = {CoRR},
  volume       = {abs/2303.02162},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2303.02162},
  doi          = {10.48550/ARXIV.2303.02162},
  eprinttype    = {arXiv},
  eprint       = {2303.02162},
  timestamp    = {Sun, 06 Oct 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2303-02162.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2306-17771,
  author       = {Vishal Dey and
                  Xia Ning},
  title        = {Precision Anti-Cancer Drug Selection via Neural Ranking},
  journal      = {CoRR},
  volume       = {abs/2306.17771},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2306.17771},
  doi          = {10.48550/ARXIV.2306.17771},
  eprinttype    = {arXiv},
  eprint       = {2306.17771},
  timestamp    = {Mon, 03 Jul 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2306-17771.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2308-11890,
  author       = {Ziqi Chen and
                  Bo Peng and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {Shape-conditioned 3D Molecule Generation via Equivariant Diffusion
                  Models},
  journal      = {CoRR},
  volume       = {abs/2308.11890},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2308.11890},
  doi          = {10.48550/ARXIV.2308.11890},
  eprinttype    = {arXiv},
  eprint       = {2308.11890},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2308-11890.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2309-02671,
  author       = {Frazier N. Baker and
                  Ziqi Chen and
                  Xia Ning},
  title        = {RLSynC: Offline-Online Reinforcement Learning for Synthon Completion},
  journal      = {CoRR},
  volume       = {abs/2309.02671},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2309.02671},
  doi          = {10.48550/ARXIV.2309.02671},
  eprinttype    = {arXiv},
  eprint       = {2309.02671},
  timestamp    = {Mon, 11 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2309-02671.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2309-10195,
  author       = {Bo Peng and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {Multi-modality Meets Re-learning: Mitigating Negative Transfer in
                  Sequential Recommendation},
  journal      = {CoRR},
  volume       = {abs/2309.10195},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2309.10195},
  doi          = {10.48550/ARXIV.2309.10195},
  eprinttype    = {arXiv},
  eprint       = {2309.10195},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2309-10195.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2310-01612,
  author       = {Bo Peng and
                  Ben Burns and
                  Ziqi Chen and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {Towards Efficient and Effective Adaptation of Large Language Models
                  for Sequential Recommendation},
  journal      = {CoRR},
  volume       = {abs/2310.01612},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2310.01612},
  doi          = {10.48550/ARXIV.2310.01612},
  eprinttype    = {arXiv},
  eprint       = {2310.01612},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2310-01612.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2310-13725,
  author       = {Patrick J. Lawrence and
                  Xia Ning},
  title        = {Enhancing drug and cell line representations via contrastive learning
                  for improved anti-cancer drug prioritization},
  journal      = {CoRR},
  volume       = {abs/2310.13725},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2310.13725},
  doi          = {10.48550/ARXIV.2310.13725},
  eprinttype    = {arXiv},
  eprint       = {2310.13725},
  timestamp    = {Fri, 27 Oct 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2310-13725.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2310-15211,
  author       = {Shunian Xiang and
                  Patrick J. Lawrence and
                  Bo Peng and
                  Chienwei Chiang and
                  Dokyoon Kim and
                  Li Shen and
                  Xia Ning},
  title        = {Modeling Path Importance for Effective Alzheimer's Disease Drug Repurposing},
  journal      = {CoRR},
  volume       = {abs/2310.15211},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2310.15211},
  doi          = {10.48550/ARXIV.2310.15211},
  eprinttype    = {arXiv},
  eprint       = {2310.15211},
  timestamp    = {Fri, 19 Jul 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2310-15211.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2311-07742,
  author       = {Bo Peng and
                  Ziqi Chen and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {Modeling Sequences as Star Graphs to Address Over-smoothing in Self-attentive
                  Sequential Recommendation},
  journal      = {CoRR},
  volume       = {abs/2311.07742},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2311.07742},
  doi          = {10.48550/ARXIV.2311.07742},
  eprinttype    = {arXiv},
  eprint       = {2311.07742},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2311-07742.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/TarumiTQNRBRSK22,
  author       = {Shinji Tarumi and
                  Wataru Takeuchi and
                  Rong Qi and
                  Xia Ning and
                  Laura Ruppert and
                  Hideyuki Ban and
                  Daniel H. Robertson and
                  Titus Schleyer and
                  Kensaku Kawamoto},
  title        = {Predicting pharmacotherapeutic outcomes for type 2 diabetes: An evaluation
                  of three approaches to leveraging electronic health record data from
                  multiple sources},
  journal      = {J. Biomed. Informatics},
  volume       = {129},
  pages        = {104001},
  year         = {2022},
  url          = {https://doi.org/10.1016/j.jbi.2022.104001},
  doi          = {10.1016/J.JBI.2022.104001},
  timestamp    = {Wed, 27 Jul 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbi/TarumiTQNRBRSK22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tkde/PengRPN22,
  author       = {Bo Peng and
                  Zhiyun Ren and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {{\textdollar}{\textbackslash}mathop \{{\textbackslash}mathtt \{HAM\}\}{\textdollar}HAM:
                  Hybrid Associations Models for Sequential Recommendation},
  journal      = {{IEEE} Trans. Knowl. Data Eng.},
  volume       = {34},
  number       = {10},
  pages        = {4838--4853},
  year         = {2022},
  url          = {https://doi.org/10.1109/TKDE.2021.3049692},
  doi          = {10.1109/TKDE.2021.3049692},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/tkde/PengRPN22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/PalaLNKS22,
  author       = {Daniele Pala and
                  Brian Lee and
                  Xia Ning and
                  Dokyoon Kim and
                  Li Shen},
  editor       = {Donald A. Adjeroh and
                  Qi Long and
                  Xinghua Mindy Shi and
                  Fei Guo and
                  Xiaohua Hu and
                  Srinivas Aluru and
                  Giri Narasimhan and
                  Jianxin Wang and
                  Mingon Kang and
                  Ananda Mondal and
                  Jin Liu},
  title        = {Mediation Analysis and Mixed-Effects Models for the Identification
                  of Stage-specific Imaging Genetics Patterns in Alzheimer's Disease},
  booktitle    = {{IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2022, Las Vegas, NV, USA, December 6-8, 2022},
  pages        = {2667--2673},
  publisher    = {{IEEE}},
  year         = {2022},
  url          = {https://doi.org/10.1109/BIBM55620.2022.9995405},
  doi          = {10.1109/BIBM55620.2022.9995405},
  timestamp    = {Sun, 06 Oct 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bibm/PalaLNKS22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/sp/NikolakopoulosNDK22,
  author       = {Athanasios N. Nikolakopoulos and
                  Xia Ning and
                  Christian Desrosiers and
                  George Karypis},
  editor       = {Francesco Ricci and
                  Lior Rokach and
                  Bracha Shapira},
  title        = {Trust Your Neighbors: {A} Comprehensive Survey of Neighborhood-Based
                  Methods for Recommender Systems},
  booktitle    = {Recommender Systems Handbook},
  pages        = {39--89},
  publisher    = {Springer {US}},
  year         = {2022},
  url          = {https://doi.org/10.1007/978-1-0716-2197-4\_2},
  doi          = {10.1007/978-1-0716-2197-4\_2},
  timestamp    = {Tue, 10 Jan 2023 15:33:11 +0100},
  biburl       = {https://dblp.org/rec/reference/sp/NikolakopoulosNDK22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2206-01875,
  author       = {Bo Peng and
                  Chang{-}Yu Tai and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {Prospective Preference Enhanced Mixed Attentive Model for Session-based
                  Recommendation},
  journal      = {CoRR},
  volume       = {abs/2206.01875},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2206.01875},
  doi          = {10.48550/ARXIV.2206.01875},
  eprinttype    = {arXiv},
  eprint       = {2206.01875},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2206-01875.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2206-04882,
  author       = {Ziqi Chen and
                  Oluwatosin R. Ayinde and
                  James R. Fuchs and
                  Huan Sun and
                  Xia Ning},
  title        = {G\({}^{\mbox{2}}\)Retro: Two-Step Graph Generative Models for Retrosynthesis
                  Prediction},
  journal      = {CoRR},
  volume       = {abs/2206.04882},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2206.04882},
  doi          = {10.48550/ARXIV.2206.04882},
  eprinttype    = {arXiv},
  eprint       = {2206.04882},
  timestamp    = {Thu, 15 May 2025 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2206-04882.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2209-07997,
  author       = {Bo Peng and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {Recursive Attentive Methods with Reused Item Representations for Sequential
                  Recommendation},
  journal      = {CoRR},
  volume       = {abs/2209.07997},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2209.07997},
  doi          = {10.48550/ARXIV.2209.07997},
  eprinttype    = {arXiv},
  eprint       = {2209.07997},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2209-07997.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/aci/HillVNS21,
  author       = {Jordan R. Hill and
                  Shyam Visweswaran and
                  Xia Ning and
                  Titus K. Schleyer},
  title        = {Use, Impact, Weaknesses, and Advanced Features of Search Functions
                  for Clinical Use in Electronic Health Records: {A} Scoping Review},
  journal      = {Appl. Clin. Inform.},
  volume       = {12},
  number       = {3},
  pages        = {417--428},
  year         = {2021},
  url          = {https://doi.org/10.1055/s-0041-1730033},
  doi          = {10.1055/S-0041-1730033},
  timestamp    = {Tue, 08 Feb 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/aci/HillVNS21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/RenPSN21,
  author       = {Zhiyun Ren and
                  Bo Peng and
                  Titus K. Schleyer and
                  Xia Ning},
  title        = {Hybrid collaborative filtering methods for recommending search terms
                  to clinicians},
  journal      = {J. Biomed. Informatics},
  volume       = {113},
  pages        = {103635},
  year         = {2021},
  url          = {https://doi.org/10.1016/j.jbi.2020.103635},
  doi          = {10.1016/J.JBI.2020.103635},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jbi/RenPSN21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/natmi/ChenMPN21,
  author       = {Ziqi Chen and
                  Martin Renqiang Min and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {A deep generative model for molecule optimization via one fragment
                  modification},
  journal      = {Nat. Mach. Intell.},
  volume       = {3},
  number       = {12},
  pages        = {1040--1049},
  year         = {2021},
  url          = {https://doi.org/10.1038/s42256-021-00410-2},
  doi          = {10.1038/S42256-021-00410-2},
  timestamp    = {Sun, 06 Oct 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/natmi/ChenMPN21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sosym/NairNH21,
  author       = {Arvind Nair and
                  Xia Ning and
                  James H. Hill},
  title        = {Using recommender systems to improve proactive modeling},
  journal      = {Softw. Syst. Model.},
  volume       = {20},
  number       = {4},
  pages        = {1159--1181},
  year         = {2021},
  url          = {https://doi.org/10.1007/s10270-020-00841-2},
  doi          = {10.1007/S10270-020-00841-2},
  timestamp    = {Fri, 03 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/sosym/NairNH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LawrenceN21,
  author       = {Patrick J. Lawrence and
                  Xia Ning},
  title        = {Improving {MHC} Class {I} Antigen Processing Prediction via Representation
                  Learning and Cleavage Site-Specific Kernels},
  booktitle    = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
                  San Diego, CA, USA, October 30, 2021 - November 3, 2021},
  publisher    = {{AMIA}},
  year         = {2021},
  url          = {https://knowledge.amia.org/74229-amia-1.4622266/t004-1.4626008/t004-1.4626009/3577427-1.4626238/3577551-1.4626235},
  timestamp    = {Wed, 17 Apr 2024 11:46:53 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/LawrenceN21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ieeesec/LiuLXNL21,
  author       = {Jie Liu and
                  Jiawen Liu and
                  Zhen Xie and
                  Xia Ning and
                  Dong Li},
  title        = {Flame: {A} Self-Adaptive Auto-Labeling System for Heterogeneous Mobile
                  Processors},
  booktitle    = {6th {IEEE/ACM} Symposium on Edge Computing, {SEC} 2021, San Jose,
                  CA, USA, December 14-17, 2021},
  pages        = {80--93},
  publisher    = {{IEEE}},
  year         = {2021},
  url          = {https://doi.org/10.1145/3453142.3493611},
  doi          = {10.1145/3453142.3493611},
  timestamp    = {Tue, 22 Feb 2022 17:23:29 +0100},
  biburl       = {https://dblp.org/rec/conf/ieeesec/LiuLXNL21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2109-04584,
  author       = {Athanasios N. Nikolakopoulos and
                  Xia Ning and
                  Christian Desrosiers and
                  George Karypis},
  title        = {Trust your neighbors: {A} comprehensive survey of neighborhood-based
                  methods for recommender systems},
  journal      = {CoRR},
  volume       = {abs/2109.04584},
  year         = {2021},
  url          = {https://arxiv.org/abs/2109.04584},
  eprinttype    = {arXiv},
  eprint       = {2109.04584},
  timestamp    = {Tue, 21 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2109-04584.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2111-07439,
  author       = {Vishal Dey and
                  Raghu Machiraju and
                  Xia Ning},
  title        = {Improving Compound Activity Classification via Deep Transfer and Representation
                  Learning},
  journal      = {CoRR},
  volume       = {abs/2111.07439},
  year         = {2021},
  url          = {https://arxiv.org/abs/2111.07439},
  eprinttype    = {arXiv},
  eprint       = {2111.07439},
  timestamp    = {Tue, 16 Nov 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2111-07439.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcbdd/ChiangSLN20,
  author       = {Wen{-}Hao Chiang and
                  Li Shen and
                  Lang Li and
                  Xia Ning},
  title        = {Drug-drug interaction prediction based on co-medication patterns and
                  graph matching},
  journal      = {Int. J. Comput. Biol. Drug Des.},
  volume       = {13},
  number       = {1},
  pages        = {36--57},
  year         = {2020},
  url          = {https://doi.org/10.1504/IJCBDD.2020.105093},
  doi          = {10.1504/IJCBDD.2020.105093},
  timestamp    = {Thu, 07 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijcbdd/ChiangSLN20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/NingZWZM20,
  author       = {Xia Ning and
                  Chi Zhang and
                  Kai Wang and
                  Zhongming Zhao and
                  Ewy A. Math{\'{e}}},
  title        = {Correction to: The International Conference on Intelligent Biology
                  and Medicine 2019: computational methods for drug interactions},
  journal      = {{BMC} Medical Informatics Decis. Mak.},
  volume       = {20},
  number       = {1},
  pages        = {77},
  year         = {2020},
  url          = {https://doi.org/10.1186/s12911-020-1096-1},
  doi          = {10.1186/S12911-020-1096-1},
  timestamp    = {Tue, 17 Dec 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/midm/NingZWZM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/PengYRSSN20,
  author       = {Bo Peng and
                  Xiaohui Yao and
                  Shannon L. Risacher and
                  Andrew J. Saykin and
                  Li Shen and
                  Xia Ning},
  title        = {Cognitive biomarker prioritization in Alzheimer's Disease using brain
                  morphometric data},
  journal      = {{BMC} Medical Informatics Decis. Mak.},
  volume       = {20},
  number       = {1},
  pages        = {319},
  year         = {2020},
  url          = {https://doi.org/10.1186/s12911-020-01339-z},
  doi          = {10.1186/S12911-020-01339-Z},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/midm/PengYRSSN20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/YaoTSQZNLS20,
  author       = {Xiaohui Yao and
                  Tiffany Tsang and
                  Qing Sun and
                  Sara K. Quinney and
                  Pengyue Zhang and
                  Xia Ning and
                  Lang Li and
                  Li Shen},
  title        = {Mining and visualizing high-order directional drug interaction effects
                  using the {FAERS} database},
  journal      = {{BMC} Medical Informatics Decis. Mak.},
  volume       = {20-S},
  number       = {2},
  pages        = {50},
  year         = {2020},
  url          = {https://doi.org/10.1186/s12911-020-1053-z},
  doi          = {10.1186/S12911-020-1053-Z},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/midm/YaoTSQZNLS20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/NingZWZM20a,
  author       = {Xia Ning and
                  Chi Zhang and
                  Kai Wang and
                  Zhongming Zhao and
                  Ewy A. Math{\'{e}}},
  title        = {The International Conference on Intelligent Biology and Medicine 2019:
                  computational methods for drug interactions},
  journal      = {{BMC} Medical Informatics Decis. Mak.},
  volume       = {20-S},
  number       = {2},
  pages        = {51},
  year         = {2020},
  url          = {https://doi.org/10.1186/s12911-020-1051-1},
  doi          = {10.1186/S12911-020-1051-1},
  timestamp    = {Tue, 17 Dec 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/midm/NingZWZM20a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/HeLN20,
  author       = {Yicheng He and
                  Junfeng Liu and
                  Xia Ning},
  title        = {Drug Selection via Joint Push and Learning to Rank},
  journal      = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
  volume       = {17},
  number       = {1},
  pages        = {110--123},
  year         = {2020},
  url          = {https://doi.org/10.1109/TCBB.2018.2848908},
  doi          = {10.1109/TCBB.2018.2848908},
  timestamp    = {Mon, 03 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tcbb/HeLN20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2002-07699,
  author       = {Bo Peng and
                  Xiaohui Yao and
                  Shannon L. Risacher and
                  Andrew J. Saykin and
                  Li Shen and
                  Xia Ning},
  title        = {Personalized Prioritization of Cognitive Biomarkers in Alzheimer's
                  Disease via Learning to Rank using Brain Morphometric Data},
  journal      = {CoRR},
  volume       = {abs/2002.07699},
  year         = {2020},
  url          = {https://arxiv.org/abs/2002.07699},
  eprinttype    = {arXiv},
  eprint       = {2002.07699},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2002-07699.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2002-11890,
  author       = {Bo Peng and
                  Zhiyun Ren and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {{HAM:} Hybrid Associations Model with Pooling for Sequential Recommendation},
  journal      = {CoRR},
  volume       = {abs/2002.11890},
  year         = {2020},
  url          = {https://arxiv.org/abs/2002.11890},
  eprinttype    = {arXiv},
  eprint       = {2002.11890},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2002-11890.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2004-01646,
  author       = {Bo Peng and
                  Zhiyun Ren and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {M2pht: Mixed Models with Preferences and Hybrid Transitions for Next-Basket
                  Recommendation},
  journal      = {CoRR},
  volume       = {abs/2004.01646},
  year         = {2020},
  url          = {https://arxiv.org/abs/2004.01646},
  eprinttype    = {arXiv},
  eprint       = {2004.01646},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2004-01646.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-01193,
  author       = {Zhiyun Ren and
                  Bo Peng and
                  Titus K. Schleyer and
                  Xia Ning},
  title        = {Hybrid Collaborative Filtering Models for Clinical Search Recommendation},
  journal      = {CoRR},
  volume       = {abs/2008.01193},
  year         = {2020},
  url          = {https://arxiv.org/abs/2008.01193},
  eprinttype    = {arXiv},
  eprint       = {2008.01193},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2008-01193.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-05399,
  author       = {Ziwei Fan and
                  Evan Burgun and
                  Zhiyun Ren and
                  Titus Schleyer and
                  Xia Ning},
  title        = {Improving information retrieval from electronic health records using
                  dynamic and multi-collaborative filtering},
  journal      = {CoRR},
  volume       = {abs/2008.05399},
  year         = {2020},
  url          = {https://arxiv.org/abs/2008.05399},
  eprinttype    = {arXiv},
  eprint       = {2008.05399},
  timestamp    = {Mon, 03 Feb 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2008-05399.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2008-11238,
  author       = {Vishal Dey and
                  Peter Krasniak and
                  Minh Nguyen and
                  Clara Lee and
                  Xia Ning},
  title        = {Understanding Breast Implant Illness via Social Media Data Analysis},
  journal      = {CoRR},
  volume       = {abs/2008.11238},
  year         = {2020},
  url          = {https://arxiv.org/abs/2008.11238},
  eprinttype    = {arXiv},
  eprint       = {2008.11238},
  timestamp    = {Fri, 28 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2008-11238.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2012-02840,
  author       = {Ziqi Chen and
                  Martin Renqiang Min and
                  Xia Ning},
  title        = {Ranking-based Convolutional Neural Network Models for Peptide-MHC
                  Binding Prediction},
  journal      = {CoRR},
  volume       = {abs/2012.02840},
  year         = {2020},
  url          = {https://arxiv.org/abs/2012.02840},
  eprinttype    = {arXiv},
  eprint       = {2012.02840},
  timestamp    = {Wed, 09 Dec 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2012-02840.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2012-04231,
  author       = {Ziqi Chen and
                  Martin Renqiang Min and
                  Srinivasan Parthasarathy and
                  Xia Ning},
  title        = {Molecule Optimization via Fragment-based Generative Models},
  journal      = {CoRR},
  volume       = {abs/2012.04231},
  year         = {2020},
  url          = {https://arxiv.org/abs/2012.04231},
  eprinttype    = {arXiv},
  eprint       = {2012.04231},
  timestamp    = {Wed, 09 Dec 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2012-04231.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/ChasiotiYZLQNLS19,
  author       = {Danai Chasioti and
                  Xiaohui Yao and
                  Pengyue Zhang and
                  Samuel Lerner and
                  Sara K. Quinney and
                  Xia Ning and
                  Lang Li and
                  Li Shen},
  title        = {Mining Directional Drug Interaction Effects on Myopathy Using the
                  {FAERS} Database},
  journal      = {{IEEE} J. Biomed. Health Informatics},
  volume       = {23},
  number       = {5},
  pages        = {2156--2163},
  year         = {2019},
  url          = {https://doi.org/10.1109/JBHI.2018.2874533},
  doi          = {10.1109/JBHI.2018.2874533},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/titb/ChasiotiYZLQNLS19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PengN19,
  author       = {Bo Peng and
                  Xia Ning},
  editor       = {Xinghua Mindy Shi and
                  Michael Buck and
                  Jian Ma and
                  Pierangelo Veltri},
  title        = {Deep Learning for High-Order Drug-Drug Interaction Prediction},
  booktitle    = {Proceedings of the 10th {ACM} International Conference on Bioinformatics,
                  Computational Biology and Health Informatics, {BCB} 2019, Niagara
                  Falls, NY, USA, September 7-10, 2019},
  pages        = {197--206},
  publisher    = {{ACM}},
  year         = {2019},
  url          = {https://doi.org/10.1145/3307339.3342136},
  doi          = {10.1145/3307339.3342136},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bcb/PengN19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bhi/PengYRSSN19,
  author       = {Bo Peng and
                  Xiaohui Yao and
                  Shannon L. Risacher and
                  Andrew J. Saykin and
                  Li Shen and
                  Xia Ning},
  title        = {Prioritization of Cognitive Assessments in Alzheimer's Disease via
                  Learning to Rank using Brain Morphometric Data},
  booktitle    = {2019 {IEEE} {EMBS} International Conference on Biomedical {\&}
                  Health Informatics, {BHI} 2019, Chicago, IL, USA, May 19-22, 2019},
  pages        = {1--4},
  publisher    = {{IEEE}},
  year         = {2019},
  url          = {https://doi.org/10.1109/BHI.2019.8834618},
  doi          = {10.1109/BHI.2019.8834618},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bhi/PengYRSSN19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dsaa/RenNLR19,
  author       = {Zhiyun Ren and
                  Xia Ning and
                  Andrew S. Lan and
                  Huzefa Rangwala},
  editor       = {Lisa Singh and
                  Richard D. De Veaux and
                  George Karypis and
                  Francesco Bonchi and
                  Jennifer Hill},
  title        = {Grade Prediction with Neural Collaborative Filtering},
  booktitle    = {2019 {IEEE} International Conference on Data Science and Advanced
                  Analytics, {DSAA} 2019, Washington, DC, USA, October 5-8, 2019},
  pages        = {1--10},
  publisher    = {{IEEE}},
  year         = {2019},
  url          = {https://doi.org/10.1109/DSAA.2019.00014},
  doi          = {10.1109/DSAA.2019.00014},
  timestamp    = {Thu, 06 Feb 2020 15:53:51 +0100},
  biburl       = {https://dblp.org/rec/conf/dsaa/RenNLR19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/edm/RenNLR19,
  author       = {Zhiyun Ren and
                  Xia Ning and
                  Andrew S. Lan and
                  Huzefa Rangwala},
  editor       = {Michel C. Desmarais and
                  Collin F. Lynch and
                  Agathe Merceron and
                  Roger Nkambou},
  title        = {Grade Prediction Based on Cumulative Knowledge and Co-taken Courses},
  booktitle    = {Proceedings of the 12th International Conference on Educational Data
                  Mining, {EDM} 2019, Montr{\'{e}}al, Canada, July 2-5, 2019},
  publisher    = {International Educational Data Mining Society {(IEDMS)}},
  year         = {2019},
  url          = {https://drive.google.com/file/d/1EcgvJCfFfgX2xkY21aUSE9uwoe-UBEqK},
  timestamp    = {Fri, 05 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/edm/RenNLR19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/FanBSN19,
  author       = {Ziwei Fan and
                  Evan Burgun and
                  Titus Schleyer and
                  Xia Ning},
  title        = {Improving information retrieval from electronic health records using
                  dynamic and multi-collaborative filtering},
  booktitle    = {2019 {IEEE} International Conference on Healthcare Informatics, {ICHI}
                  2019, Xi'an, China, June 10-13, 2019},
  pages        = {1--3},
  publisher    = {{IEEE}},
  year         = {2019},
  url          = {https://doi.org/10.1109/ICHI.2019.8904731},
  doi          = {10.1109/ICHI.2019.8904731},
  timestamp    = {Mon, 03 Feb 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ichi/FanBSN19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/PengRY0S0N19,
  author       = {Bo Peng and
                  Zhiyun Ren and
                  Xiaohui Yao and
                  Kefei Liu and
                  Andrew J. Saykin and
                  Li Shen and
                  Xia Ning},
  editor       = {Dajiang Zhu and
                  Jingwen Yan and
                  Heng Huang and
                  Li Shen and
                  Paul M. Thompson and
                  Carl{-}Fredrik Westin and
                  Xavier Pennec and
                  Sarang C. Joshi and
                  Mads Nielsen and
                  Tom Fletcher and
                  Stanley Durrleman and
                  Stefan Sommer},
  title        = {Prioritizing Amyloid Imaging Biomarkers in Alzheimer's Disease via
                  Learning to Rank},
  booktitle    = {Multimodal Brain Image Analysis and Mathematical Foundations of Computational
                  Anatomy - 4th International Workshop, {MBIA} 2019, and 7th International
                  Workshop, {MFCA} 2019, Held in Conjunction with {MICCAI} 2019, Shenzhen,
                  China, October 17, 2019, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {11846},
  pages        = {139--148},
  publisher    = {Springer},
  year         = {2019},
  url          = {https://doi.org/10.1007/978-3-030-33226-6\_16},
  doi          = {10.1007/978-3-030-33226-6\_16},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/miccai/PengRY0S0N19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1902-08675,
  author       = {Wen{-}Hao Chiang and
                  Li Shen and
                  Lang Li and
                  Xia Ning},
  title        = {Drug-drug interaction prediction based on co-medication patterns and
                  graph matching},
  journal      = {CoRR},
  volume       = {abs/1902.08675},
  year         = {2019},
  url          = {http://arxiv.org/abs/1902.08675},
  eprinttype    = {arXiv},
  eprint       = {1902.08675},
  timestamp    = {Tue, 22 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1902-08675.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1911-06910,
  author       = {Bo Peng and
                  Renqiang Min and
                  Xia Ning},
  title        = {CNN-based Dual-Chain Models for Knowledge Graph Learning},
  journal      = {CoRR},
  volume       = {abs/1911.06910},
  year         = {2019},
  url          = {http://arxiv.org/abs/1911.06910},
  eprinttype    = {arXiv},
  eprint       = {1911.06910},
  timestamp    = {Wed, 10 Jan 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1911-06910.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jhir/ChiangSSLN18,
  author       = {Wen{-}Hao Chiang and
                  Titus Schleyer and
                  Li Shen and
                  Lang Li and
                  Xia Ning},
  title        = {Pattern Discovery from High-Order Drug-Drug Interaction Relations},
  journal      = {J. Heal. Informatics Res.},
  volume       = {2},
  number       = {3},
  pages        = {272--304},
  year         = {2018},
  url          = {https://doi.org/10.1007/s41666-018-0020-2},
  doi          = {10.1007/S41666-018-0020-2},
  timestamp    = {Thu, 16 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jhir/ChiangSSLN18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csedu/AchesonN18,
  author       = {Lingma Lu Acheson and
                  Xia Ning},
  editor       = {Bruce M. McLaren and
                  Rob Reilly and
                  Susan Zvacek and
                  James Onohuome Uhomoibhi},
  title        = {Enhance E-Learning through Data Mining for Personalized Intervention},
  booktitle    = {Proceedings of the 10th International Conference on Computer Supported
                  Education, {CSEDU} 2018, Funchal, Madeira, Portugal, March 15-17,
                  2018, Volume 1},
  pages        = {461--465},
  publisher    = {SciTePress},
  year         = {2018},
  url          = {https://doi.org/10.5220/0006793304610465},
  doi          = {10.5220/0006793304610465},
  timestamp    = {Wed, 09 May 2018 16:57:24 +0200},
  biburl       = {https://dblp.org/rec/conf/csedu/AchesonN18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sdm/RenNR18,
  author       = {Zhiyun Ren and
                  Xia Ning and
                  Huzefa Rangwala},
  editor       = {Martin Ester and
                  Dino Pedreschi},
  title        = {{ALE:} Additive Latent Effect Models for Grade Prediction},
  booktitle    = {Proceedings of the 2018 {SIAM} International Conference on Data Mining,
                  {SDM} 2018, May 3-5, 2018, San Diego Marriott Mission Valley, San
                  Diego, CA, {USA}},
  pages        = {477--485},
  publisher    = {{SIAM}},
  year         = {2018},
  url          = {https://doi.org/10.1137/1.9781611975321.54},
  doi          = {10.1137/1.9781611975321.54},
  timestamp    = {Sun, 13 May 2018 11:47:13 +0200},
  biburl       = {https://dblp.org/rec/conf/sdm/RenNR18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1801-05535,
  author       = {Zhiyun Ren and
                  Xia Ning and
                  Huzefa Rangwala},
  title        = {{ALE:} Additive Latent Effect Models for Grade Prediction},
  journal      = {CoRR},
  volume       = {abs/1801.05535},
  year         = {2018},
  url          = {http://arxiv.org/abs/1801.05535},
  eprinttype    = {arXiv},
  eprint       = {1801.05535},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1801-05535.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1801-07691,
  author       = {Yicheng He and
                  Junfeng Liu and
                  Lijun Cheng and
                  Xia Ning},
  title        = {Drug Selection via Joint Push and Learning to Rank},
  journal      = {CoRR},
  volume       = {abs/1801.07691},
  year         = {2018},
  url          = {http://arxiv.org/abs/1801.07691},
  eprinttype    = {arXiv},
  eprint       = {1801.07691},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1801-07691.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1803-03185,
  author       = {Wen{-}Hao Chiang and
                  Li Shen and
                  Lang Li and
                  Xia Ning},
  title        = {Drug Recommendation toward Safe Polypharmacy},
  journal      = {CoRR},
  volume       = {abs/1803.03185},
  year         = {2018},
  url          = {http://arxiv.org/abs/1803.03185},
  eprinttype    = {arXiv},
  eprint       = {1803.03185},
  timestamp    = {Tue, 22 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1803-03185.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/LiuN17,
  author       = {Junfeng Liu and
                  Xia Ning},
  title        = {Multi-Assay-Based Compound Prioritization via Assistance Utilization:
                  {A} Machine Learning Framework},
  journal      = {J. Chem. Inf. Model.},
  volume       = {57},
  number       = {3},
  pages        = {484--498},
  year         = {2017},
  url          = {https://doi.org/10.1021/acs.jcim.6b00737},
  doi          = {10.1021/ACS.JCIM.6B00737},
  timestamp    = {Fri, 06 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcisd/LiuN17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/LiuN17a,
  author       = {Junfeng Liu and
                  Xia Ning},
  title        = {Differential Compound Prioritization via Bidirectional Selectivity
                  Push with Power},
  journal      = {J. Chem. Inf. Model.},
  volume       = {57},
  number       = {12},
  pages        = {2958--2975},
  year         = {2017},
  url          = {https://doi.org/10.1021/acs.jcim.7b00552},
  doi          = {10.1021/ACS.JCIM.7B00552},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/LiuN17a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuN17,
  author       = {Junfeng Liu and
                  Xia Ning},
  editor       = {Nurit Haspel and
                  Lenore J. Cowen and
                  Amarda Shehu and
                  Tamer Kahveci and
                  Giuseppe Pozzi},
  title        = {Differential Compound Prioritization via Bi-Directional Selectivity
                  Push with Power},
  booktitle    = {Proceedings of the 8th {ACM} International Conference on Bioinformatics,
                  Computational Biology, and Health Informatics, {BCB} 2017, Boston,
                  MA, USA, August 20-23, 2017},
  pages        = {394--399},
  publisher    = {{ACM}},
  year         = {2017},
  url          = {https://doi.org/10.1145/3107411.3107486},
  doi          = {10.1145/3107411.3107486},
  timestamp    = {Tue, 06 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bcb/LiuN17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/edm/RenNR17,
  author       = {Zhiyun Ren and
                  Xia Ning and
                  Huzefa Rangwala},
  editor       = {Xiangen Hu and
                  Tiffany Barnes and
                  Arnon Hershkovitz and
                  Luc Paquette},
  title        = {Grade Prediction with Temporal Course-wise Influence},
  booktitle    = {Proceedings of the 10th International Conference on Educational Data
                  Mining, {EDM} 2017, Wuhan, Hubei, China, June 25-28, 2017},
  publisher    = {International Educational Data Mining Society {(IEDMS)}},
  year         = {2017},
  url          = {http://educationaldatamining.org/EDM2017/proc\_files/papers/paper\_42.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/edm/RenNR17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/NingSSL17,
  author       = {Xia Ning and
                  Titus Schleyer and
                  Li Shen and
                  Lang Li},
  title        = {Pattern Discovery from Directional High-Order Drug-Drug Interaction
                  Relations},
  booktitle    = {2017 {IEEE} International Conference on Healthcare Informatics, {ICHI}
                  2017, Park City, UT, USA, August 23-26, 2017},
  pages        = {154--162},
  publisher    = {{IEEE} Computer Society},
  year         = {2017},
  url          = {https://doi.org/10.1109/ICHI.2017.20},
  doi          = {10.1109/ICHI.2017.20},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ichi/NingSSL17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/NingSL17,
  author       = {Xia Ning and
                  Li Shen and
                  Lang Li},
  title        = {Predicting High-Order Directional Drug-Drug Interaction Relations},
  booktitle    = {2017 {IEEE} International Conference on Healthcare Informatics, {ICHI}
                  2017, Park City, UT, USA, August 23-26, 2017},
  pages        = {556--561},
  publisher    = {{IEEE} Computer Society},
  year         = {2017},
  url          = {https://doi.org/10.1109/ICHI.2017.76},
  doi          = {10.1109/ICHI.2017.76},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ichi/NingSL17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/icdm/2017w,
  editor       = {Raju Gottumukkala and
                  Xia Ning and
                  Guozhu Dong and
                  Vijay Raghavan and
                  Srinivas Aluru and
                  George Karypis and
                  Lucio Miele and
                  Xindong Wu},
  title        = {2017 {IEEE} International Conference on Data Mining Workshops, {ICDM}
                  Workshops 2017, New Orleans, LA, USA, November 18-21, 2017},
  publisher    = {{IEEE} Computer Society},
  year         = {2017},
  url          = {https://ieeexplore.ieee.org/xpl/conhome/8211022/proceeding},
  isbn         = {978-1-5386-3800-2},
  timestamp    = {Wed, 16 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/icdm/2017w.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1709-05433,
  author       = {Zhiyun Ren and
                  Xia Ning and
                  Huzefa Rangwala},
  title        = {Grade Prediction with Temporal Course-wise Influence},
  journal      = {CoRR},
  volume       = {abs/1709.05433},
  year         = {2017},
  url          = {http://arxiv.org/abs/1709.05433},
  eprinttype    = {arXiv},
  eprint       = {1709.05433},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1709-05433.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icac/XuN0RJ16,
  author       = {Hongteng Xu and
                  Xia Ning and
                  Hui Zhang and
                  Junghwan Rhee and
                  Guofei Jiang},
  editor       = {Samuel Kounev and
                  Holger Giese and
                  Jie Liu},
  title        = {PInfer: Learning to Infer Concurrent Request Paths from System Kernel
                  Events},
  booktitle    = {2016 {IEEE} International Conference on Autonomic Computing, {ICAC}
                  2016, Wuerzburg, Germany, July 17-22, 2016},
  pages        = {199--208},
  publisher    = {{IEEE} Computer Society},
  year         = {2016},
  url          = {https://doi.org/10.1109/ICAC.2016.38},
  doi          = {10.1109/ICAC.2016.38},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icac/XuN0RJ16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sdm/BianLN16,
  author       = {Xiao Bian and
                  Feng Li and
                  Xia Ning},
  editor       = {Sanjay Chawla Venkatasubramanian and
                  Wagner Meira Jr.},
  title        = {Kernelized Sparse Self-Representation for Clustering and Recommendation},
  booktitle    = {Proceedings of the 2016 {SIAM} International Conference on Data Mining,
                  Miami, Florida, USA, May 5-7, 2016},
  pages        = {10--17},
  publisher    = {{SIAM}},
  year         = {2016},
  url          = {https://doi.org/10.1137/1.9781611974348.2},
  doi          = {10.1137/1.9781611974348.2},
  timestamp    = {Sun, 02 Jun 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/sdm/BianLN16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/ZhangCHNAPC16,
  author       = {Baichuan Zhang and
                  Sutanay Choudhury and
                  Mohammad Al Hasan and
                  Xia Ning and
                  Khushbu Agarwal and
                  Sumit Purohit and
                  Paola Gabriela Pesntez Cabrera},
  title        = {Trust from the past: Bayesian Personalized Ranking based Link Prediction
                  in Knowledge Graphs},
  journal      = {CoRR},
  volume       = {abs/1601.03778},
  year         = {2016},
  url          = {http://arxiv.org/abs/1601.03778},
  eprinttype    = {arXiv},
  eprint       = {1601.03778},
  timestamp    = {Mon, 13 Aug 2018 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/ZhangCHNAPC16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccs/WangQLWRNLJ15,
  author       = {Jun Wang and
                  Zhiyun Qian and
                  Zhichun Li and
                  Zhenyu Wu and
                  Junghwan Rhee and
                  Xia Ning and
                  Peng Liu and
                  Guofei Jiang},
  editor       = {Feng Bao and
                  Steven Miller and
                  Jianying Zhou and
                  Gail{-}Joon Ahn},
  title        = {Discover and Tame Long-running Idling Processes in Enterprise Systems},
  booktitle    = {Proceedings of the 10th {ACM} Symposium on Information, Computer and
                  Communications Security, {ASIA} {CCS} '15, Singapore, April 14-17,
                  2015},
  pages        = {543--554},
  publisher    = {{ACM}},
  year         = {2015},
  url          = {https://doi.org/10.1145/2714576.2714613},
  doi          = {10.1145/2714576.2714613},
  timestamp    = {Thu, 08 Aug 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/ccs/WangQLWRNLJ15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcai/LuoXZNZY015,
  author       = {Dixin Luo and
                  Hongteng Xu and
                  Yi Zhen and
                  Xia Ning and
                  Hongyuan Zha and
                  Xiaokang Yang and
                  Wenjun Zhang},
  editor       = {Qiang Yang and
                  Michael J. Wooldridge},
  title        = {Multi-Task Multi-Dimensional Hawkes Processes for Modeling Event Sequences},
  booktitle    = {Proceedings of the Twenty-Fourth International Joint Conference on
                  Artificial Intelligence, {IJCAI} 2015, Buenos Aires, Argentina, July
                  25-31, 2015},
  pages        = {3685--3691},
  publisher    = {{AAAI} Press},
  year         = {2015},
  url          = {http://ijcai.org/Abstract/15/518},
  timestamp    = {Wed, 05 Mar 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ijcai/LuoXZNZY015.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pakdd/HuangN15,
  author       = {Jiaji Huang and
                  Xia Ning},
  editor       = {Tru H. Cao and
                  Ee{-}Peng Lim and
                  Zhi{-}Hua Zhou and
                  Tu Bao Ho and
                  David Wai{-}Lok Cheung and
                  Hiroshi Motoda},
  title        = {Latent Space Tracking from Heterogeneous Data with an Application
                  for Anomaly Detection},
  booktitle    = {Advances in Knowledge Discovery and Data Mining - 19th Pacific-Asia
                  Conference, {PAKDD} 2015, Ho Chi Minh City, Vietnam, May 19-22, 2015,
                  Proceedings, Part {I}},
  series       = {Lecture Notes in Computer Science},
  volume       = {9077},
  pages        = {429--441},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-18038-0\_34},
  doi          = {10.1007/978-3-319-18038-0\_34},
  timestamp    = {Tue, 24 Aug 2021 17:53:57 +0200},
  biburl       = {https://dblp.org/rec/conf/pakdd/HuangN15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pkdd/BianNJ15,
  author       = {Xiao Bian and
                  Xia Ning and
                  Geoff Jiang},
  editor       = {Annalisa Appice and
                  Pedro Pereira Rodrigues and
                  V{\'{\i}}tor Santos Costa and
                  Jo{\~{a}}o Gama and
                  Al{\'{\i}}pio Jorge and
                  Carlos Soares},
  title        = {Hierarchical Sparse Dictionary Learning},
  booktitle    = {Machine Learning and Knowledge Discovery in Databases - European Conference,
                  {ECML} {PKDD} 2015, Porto, Portugal, September 7-11, 2015, Proceedings,
                  Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {9285},
  pages        = {687--700},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-23525-7\_42},
  doi          = {10.1007/978-3-319-23525-7\_42},
  timestamp    = {Mon, 30 Nov 2020 08:47:26 +0100},
  biburl       = {https://dblp.org/rec/conf/pkdd/BianNJ15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/premi/NingK15,
  author       = {Xia Ning and
                  George Karypis},
  editor       = {Marzena Kryszkiewicz and
                  Sanghamitra Bandyopadhyay and
                  Henryk Rybinski and
                  Sankar K. Pal},
  title        = {Recent Advances in Recommender Systems and Future Directions},
  booktitle    = {Pattern Recognition and Machine Intelligence - 6th International Conference,
                  PReMI 2015, Warsaw, Poland, June 30 - July 3, 2015, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {9124},
  pages        = {3--9},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-19941-2\_1},
  doi          = {10.1007/978-3-319-19941-2\_1},
  timestamp    = {Thu, 14 Oct 2021 10:46:31 +0200},
  biburl       = {https://dblp.org/rec/conf/premi/NingK15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recsys/LinN15,
  author       = {Tzu{-}Chun Lin and
                  Xia Ning},
  editor       = {David Ben{-}Shimon and
                  Michael Friedmann and
                  Lior Rokach and
                  Bracha Shapira},
  title        = {Multi-Perspective Modeling for Click Event Prediction},
  booktitle    = {Proceedings of the 2015 International {ACM} Recommender Systems Challenge,
                  RecSys Challenge 2015, Vienna, Austria, September 16-20, 2015},
  pages        = {11:1--11:4},
  publisher    = {{ACM}},
  year         = {2015},
  url          = {https://doi.org/10.1145/2813448.2813520},
  doi          = {10.1145/2813448.2813520},
  timestamp    = {Tue, 06 Nov 2018 11:07:03 +0100},
  biburl       = {https://dblp.org/rec/conf/recsys/LinN15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:reference/sp/NingDK15,
  author       = {Xia Ning and
                  Christian Desrosiers and
                  George Karypis},
  editor       = {Francesco Ricci and
                  Lior Rokach and
                  Bracha Shapira},
  title        = {A Comprehensive Survey of Neighborhood-Based Recommendation Methods},
  booktitle    = {Recommender Systems Handbook},
  pages        = {37--76},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-1-4899-7637-6\_2},
  doi          = {10.1007/978-1-4899-7637-6\_2},
  timestamp    = {Tue, 21 Mar 2023 21:16:16 +0100},
  biburl       = {https://dblp.org/rec/reference/sp/NingDK15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aistats/MinNCG14,
  author       = {Martin Renqiang Min and
                  Xia Ning and
                  Chao Cheng and
                  Mark Gerstein},
  title        = {Interpretable Sparse High-Order Boltzmann Machines},
  booktitle    = {Proceedings of the Seventeenth International Conference on Artificial
                  Intelligence and Statistics, {AISTATS} 2014, Reykjavik, Iceland, April
                  22-25, 2014},
  series       = {{JMLR} Workshop and Conference Proceedings},
  volume       = {33},
  pages        = {614--622},
  publisher    = {JMLR.org},
  year         = {2014},
  url          = {http://proceedings.mlr.press/v33/min14.html},
  timestamp    = {Wed, 29 May 2019 08:41:44 +0200},
  biburl       = {https://dblp.org/rec/conf/aistats/MinNCG14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/KabburNK13,
  author       = {Santosh Kabbur and
                  Xia Ning and
                  George Karypis},
  editor       = {Inderjit S. Dhillon and
                  Yehuda Koren and
                  Rayid Ghani and
                  Ted E. Senator and
                  Paul Bradley and
                  Rajesh Parekh and
                  Jingrui He and
                  Robert L. Grossman and
                  Ramasamy Uthurusamy},
  title        = {{FISM:} factored item similarity models for top-N recommender systems},
  booktitle    = {The 19th {ACM} {SIGKDD} International Conference on Knowledge Discovery
                  and Data Mining, {KDD} 2013, Chicago, IL, USA, August 11-14, 2013},
  pages        = {659--667},
  publisher    = {{ACM}},
  year         = {2013},
  url          = {https://doi.org/10.1145/2487575.2487589},
  doi          = {10.1145/2487575.2487589},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/kdd/KabburNK13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isci/ZhuangKNHS12,
  author       = {Fuzhen Zhuang and
                  George Karypis and
                  Xia Ning and
                  Qing He and
                  Zhongzhi Shi},
  title        = {Multi-view learning via probabilistic latent semantic analysis},
  journal      = {Inf. Sci.},
  volume       = {199},
  pages        = {20--30},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.ins.2012.02.058},
  doi          = {10.1016/J.INS.2012.02.058},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/isci/ZhuangKNHS12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/NingWK12,
  author       = {Xia Ning and
                  Michael A. Walters and
                  George Karypis},
  title        = {Improved Machine Learning Models for Predicting Selective Compounds},
  journal      = {J. Chem. Inf. Model.},
  volume       = {52},
  number       = {1},
  pages        = {38--50},
  year         = {2012},
  url          = {https://doi.org/10.1021/ci200346b},
  doi          = {10.1021/CI200346B},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/NingWK12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/NingWK12a,
  author       = {Xia Ning and
                  Michael A. Walters and
                  George Karypis},
  title        = {Improved Machine Learning Models for Predicting Selective Compounds},
  journal      = {J. Chem. Inf. Model.},
  volume       = {52},
  number       = {5},
  pages        = {1411},
  year         = {2012},
  url          = {https://doi.org/10.1021/ci300201j},
  doi          = {10.1021/CI300201J},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/NingWK12a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recsys/NingK12,
  author       = {Xia Ning and
                  George Karypis},
  editor       = {Padraig Cunningham and
                  Neil J. Hurley and
                  Ido Guy and
                  Sarabjot Singh Anand},
  title        = {Sparse linear methods with side information for top-n recommendations},
  booktitle    = {Sixth {ACM} Conference on Recommender Systems, RecSys '12, Dublin,
                  Ireland, September 9-13, 2012},
  pages        = {155--162},
  publisher    = {{ACM}},
  year         = {2012},
  url          = {https://doi.org/10.1145/2365952.2365983},
  doi          = {10.1145/2365952.2365983},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/recsys/NingK12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/www/NingK12,
  author       = {Xia Ning and
                  George Karypis},
  editor       = {Alain Mille and
                  Fabien Gandon and
                  Jacques Misselis and
                  Michael Rabinovich and
                  Steffen Staab},
  title        = {Sparse linear methods with side information for Top-N recommendations},
  booktitle    = {Proceedings of the 21st World Wide Web Conference, {WWW} 2012, Lyon,
                  France, April 16-20, 2012 (Companion Volume)},
  pages        = {581--582},
  publisher    = {{ACM}},
  year         = {2012},
  url          = {https://doi.org/10.1145/2187980.2188137},
  doi          = {10.1145/2187980.2188137},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/www/NingK12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NingWK11,
  author       = {Xia Ning and
                  Michael A. Walters and
                  George Karypis},
  editor       = {Robert Grossman and
                  Andrey Rzhetsky and
                  Sun Kim and
                  Wei Wang},
  title        = {Improved machine learning models for predicting selective compounds},
  booktitle    = {{ACM} International Conference on Bioinformatics, Computational Biology
                  and Biomedicine, BCB' 11, Chicago, IL, {USA} - July 31 - August 03,
                  2011},
  pages        = {106--115},
  publisher    = {{ACM}},
  year         = {2011},
  url          = {https://doi.org/10.1145/2147805.2147817},
  doi          = {10.1145/2147805.2147817},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bcb/NingWK11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/NingK11,
  author       = {Xia Ning and
                  George Karypis},
  editor       = {Diane J. Cook and
                  Jian Pei and
                  Wei Wang and
                  Osmar R. Za{\"{\i}}ane and
                  Xindong Wu},
  title        = {{SLIM:} Sparse Linear Methods for Top-N Recommender Systems},
  booktitle    = {11th {IEEE} International Conference on Data Mining, {ICDM} 2011,
                  Vancouver, BC, Canada, December 11-14, 2011},
  pages        = {497--506},
  publisher    = {{IEEE} Computer Society},
  year         = {2011},
  url          = {https://doi.org/10.1109/ICDM.2011.134},
  doi          = {10.1109/ICDM.2011.134},
  timestamp    = {Sat, 01 Mar 2025 10:58:19 +0100},
  biburl       = {https://dblp.org/rec/conf/icdm/NingK11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sdm/NingQ11,
  author       = {Xia Ning and
                  Yanjun Qi},
  title        = {Semi-Supervised Convolution Graph Kernels for Relation Extraction},
  booktitle    = {Proceedings of the Eleventh {SIAM} International Conference on Data
                  Mining, {SDM} 2011, April 28-30, 2011, Mesa, Arizona, {USA}},
  pages        = {510--521},
  publisher    = {{SIAM} / Omnipress},
  year         = {2011},
  url          = {https://doi.org/10.1137/1.9781611972818.44},
  doi          = {10.1137/1.9781611972818.44},
  timestamp    = {Wed, 17 May 2017 14:24:53 +0200},
  biburl       = {https://dblp.org/rec/conf/sdm/NingQ11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pkdd/KuksaQBCWPN10,
  author       = {Pavel P. Kuksa and
                  Yanjun Qi and
                  Bing Bai and
                  Ronan Collobert and
                  Jason Weston and
                  Vladimir Pavlovic and
                  Xia Ning},
  editor       = {Jos{\'{e}} L. Balc{\'{a}}zar and
                  Francesco Bonchi and
                  Aristides Gionis and
                  Mich{\`{e}}le Sebag},
  title        = {Semi-supervised Abstraction-Augmented String Kernel for Multi-level
                  Bio-Relation Extraction},
  booktitle    = {Machine Learning and Knowledge Discovery in Databases, European Conference,
                  {ECML} {PKDD} 2010, Barcelona, Spain, September 20-24, 2010, Proceedings,
                  Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {6322},
  pages        = {128--144},
  publisher    = {Springer},
  year         = {2010},
  url          = {https://doi.org/10.1007/978-3-642-15883-4\_9},
  doi          = {10.1007/978-3-642-15883-4\_9},
  timestamp    = {Tue, 11 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/pkdd/KuksaQBCWPN10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:journals/jmlr/NingK10,
  author       = {Xia Ning and
                  George Karypis},
  editor       = {Masashi Sugiyama and
                  Qiang Yang},
  title        = {Multi-task Learning for Recommender System},
  booktitle    = {Proceedings of the 2nd Asian Conference on Machine Learning, {ACML}
                  2010, Tokyo, Japan, November 8-10, 2010},
  series       = {{JMLR} Proceedings},
  volume       = {13},
  pages        = {269--284},
  publisher    = {JMLR.org},
  year         = {2010},
  url          = {http://proceedings.mlr.press/v13/ning10a.html},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jmlr/NingK10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:series/ads/WaleNK10,
  author       = {Nikil Wale and
                  Xia Ning and
                  George Karypis},
  editor       = {Charu C. Aggarwal and
                  Haixun Wang},
  title        = {Trends in Chemical Graph Data Mining},
  booktitle    = {Managing and Mining Graph Data},
  series       = {Advances in Database Systems},
  volume       = {40},
  pages        = {581--606},
  publisher    = {Springer},
  year         = {2010},
  url          = {https://doi.org/10.1007/978-1-4419-6045-0\_19},
  doi          = {10.1007/978-1-4419-6045-0\_19},
  timestamp    = {Tue, 16 May 2017 14:24:24 +0200},
  biburl       = {https://dblp.org/rec/series/ads/WaleNK10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcisd/NingRK09,
  author       = {Xia Ning and
                  Huzefa Rangwala and
                  George Karypis},
  title        = {Multi-Assay-Based Structure-Activity Relationship Models: Improving
                  Structure-Activity Relationship Models by Incorporating Activity Information
                  from Related Targets},
  journal      = {J. Chem. Inf. Model.},
  volume       = {49},
  number       = {11},
  pages        = {2444--2456},
  year         = {2009},
  url          = {https://doi.org/10.1021/ci900182q},
  doi          = {10.1021/CI900182Q},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/NingRK09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sdm/NingK09,
  author       = {Xia Ning and
                  George Karypis},
  title        = {The Set Classification Problem and Solution Methods},
  booktitle    = {Proceedings of the {SIAM} International Conference on Data Mining,
                  {SDM} 2009, April 30 - May 2, 2009, Sparks, Nevada, {USA}},
  pages        = {847--858},
  publisher    = {{SIAM}},
  year         = {2009},
  url          = {https://doi.org/10.1137/1.9781611972795.73},
  doi          = {10.1137/1.9781611972795.73},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/sdm/NingK09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/NingK08,
  author       = {Xia Ning and
                  George Karypis},
  title        = {The Set Classification Problem and Solution Methods},
  booktitle    = {Workshops Proceedings of the 8th {IEEE} International Conference on
                  Data Mining {(ICDM} 2008), December 15-19, 2008, Pisa, Italy},
  pages        = {720--729},
  publisher    = {{IEEE} Computer Society},
  year         = {2008},
  url          = {https://doi.org/10.1109/ICDMW.2008.113},
  doi          = {10.1109/ICDMW.2008.113},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icdm/NingK08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pdcat/0002ZN05,
  author       = {Jianjun Chen and
                  Yao Zheng and
                  Xia Ning},
  title        = {Scalable Parallel Quadrilateral Mesh Generation Coupled with Mesh
                  Partitioning},
  booktitle    = {Sixth International Conference on Parallel and Distributed Computing,
                  Applications and Technologies {(PDCAT} 2005), 5-8 December 2005, Dalian,
                  China},
  pages        = {966--970},
  publisher    = {{IEEE} Computer Society},
  year         = {2005},
  url          = {https://doi.org/10.1109/PDCAT.2005.210},
  doi          = {10.1109/PDCAT.2005.210},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/pdcat/0002ZN05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}