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2020 – today
- 2024
[j15]Carl Orge Retzlaff, Alessa Angerschmid, Anna Saranti, David Schneeberger
, Richard Röttger, Heimo Müller, Andreas Holzinger:
Post-hoc vs ante-hoc explanations: xAI design guidelines for data scientists. Cogn. Syst. Res. 86: 101243 (2024)- [j14]Anne Hartebrodt, Richard Röttger, David B. Blumenthal:
Federated singular value decomposition for high-dimensional data. Data Min. Knowl. Discov. 38(3): 938-975 (2024) - [i8]Yuliya Burankova, Miriam Abele, Mohammad Bakhtiari, Christine von Törne, Teresa Barth, Lisa Schweizer, Pieter Giesbertz, Johannes R. Schmidt, Stefan Kalkhof, Janina Müller-Deile, Peter A. van Veelen, Yassene Mohammed, Elke Hammer, Lis Arend, Klaudia Adamowicz, Tanja Laske, Anne Hartebrodt, Tobias Frisch, Chen Meng, Julian O. Matschinske, Julian Späth, Richard Röttger, Veit Schwämmle, Stefanie M. Hauck, Stefan Lichtenthaler, Axel Imhof, Matthias Mann, Christina Ludwig, Bernhard Küster, Jan Baumbach, Olga I. Zolotareva:
Privacy-Preserving Multi-Center Differential Protein Abundance Analysis with FedProt. CoRR abs/2407.15220 (2024) - 2023
- [j13]Anne Hartebrodt, Richard Röttger:
Privacy of Federated QR Decomposition Using Additive Secure Multiparty Computation. IEEE Trans. Inf. Forensics Secur. 18: 5122-5132 (2023) - [c10]Yana Sakhnovych, Richard Röttger, Rudolf Mayer:
A Comparison of Federated Aggregation Strategies and Architectures for Next-word Prediction. IEEE Big Data 2023: 5569-5577 - [c9]Andreas Holzinger, Anna Saranti, Anne-Christin Hauschild, Jacqueline Michelle Beinecke, Dominik Heider, Richard Röttger, Heimo Müller, Jan Baumbach, Bastian Pfeifer:
Human-in-the-Loop Integration with Domain-Knowledge Graphs for Explainable Federated Deep Learning. CD-MAKE 2023: 45-64 - [c8]David Schneeberger, Richard Röttger, Federico Cabitza, Andrea Campagner, Markus Plass, Heimo Müller, Andreas Holzinger:
The Tower of Babel in Explainable Artificial Intelligence (XAI). CD-MAKE 2023: 65-81 - 2022
- [j12]Tobias Greisager Rehfeldt, Konrad Krawczyk, Mathias Bøgebjerg, Veit Schwämmle, Richard Röttger:
MS2AI: automated repurposing of public peptide LC-MS data for machine learning applications. Bioinform. 38(3): 875-877 (2022) - [c7]Juan Marín-Vega, Michael Sloth, Peter Schneider-Kamp, Richard Röttger:
DRHDR: A Dual branch Residual Network for Multi-Bracket High Dynamic Range Imaging. CVPR Workshops 2022: 843-851 - [c6]Eduardo Pérez-Pellitero, Sibi Catley-Chandar, Richard Shaw, Ales Leonardis, Radu Timofte, Zexin Zhang, Cen Liu, Yunbo Peng, Yue Lin, Gaocheng Yu, Jin Zhang, Zhe Ma, Hongbin Wang, Xiangyu Chen, Xintao Wang, Haiwei Wu, Lin Liu, Chao Dong, Jiantao Zhou, Qingsen Yan, Song Zhang, Weiye Chen, Yuhang Liu, Zhen Zhang, Yanning Zhang, Javen Qinfeng Shi, Dong Gong, Dan Zhu, Mengdi Sun, Guannan Chen, Yang Hu, Haowei Li, Baozhu Zou, Zhen Liu, Wenjie Lin, Ting Jiang, Chengzhi Jiang, Xinpeng Li, Mingyan Han, Haoqiang Fan, Jian Sun, Shuaicheng Liu, Juan Marín-Vega, Michael Sloth, Peter Schneider-Kamp, Richard Röttger, Chunyang Li, Long Bao, Gang He, Ziyao Xu, Li Xu, Gen Zhan, Ming Sun, Xing Wen, Junlin Li, Jinjing Li, Chenghua Li, Ruipeng Gang, Fangya Li, Chenming Liu, Shuang Feng, Fei Lei, Rui Liu, Junxiang Ruan, Tianhong Dai, Wei Li, Zhan Lu, Hengyan Liu, Peian Huang, Guangyu Ren, Yonglin Luo, Chang Liu, Qiang Tu, Sai Ma, Yizhen Cao, Steven Tel, Barthelemy Heyrman, Dominique Ginhac, Chul Lee, Gahyeon Kim, Seonghyun Park, An Gia Vien, Truong Thanh Nhat Mai, Howoon Yoon, Tu Vo, Alexander Holston, Sheir Zaheer, Chan Y. Park:
NTIRE 2022 Challenge on High Dynamic Range Imaging: Methods and Results. CVPR Workshops 2022: 1008-1022 - [c5]Marcos V. Conde, Radu Timofte, Yibin Huang, Jingyang Peng, Chang Chen, Cheng Li, Eduardo Pérez-Pellitero, Fenglong Song, Furui Bai, Shuai Liu, Chaoyu Feng, Xiaotao Wang, Lei Lei, Yu Zhu, Chenghua Li, Yingying Jiang, Yong A, Peisong Wang, Cong Leng, Jian Cheng, Xiaoyu Liu, Zhicun Yin, Zhilu Zhang, Junyi Li, Ming Liu, Wangmeng Zuo, Jun Jiang, Jinha Kim, Yue Zhang, Beiji Zou, Zhikai Zong, Xiaoxiao Liu, Juan Marín-Vega, Michael Sloth, Peter Schneider-Kamp, Richard Röttger, Furkan Kinli, Baris Özcan, Furkan Kiraç, Li Leyi, S. M. Nadim Uddin, Dipon Kumar Ghosh, Yong Ju Jung:
Reversed Image Signal Processing and RAW Reconstruction. AIM 2022 Challenge Report. ECCV Workshops (3) 2022: 3-26 - [i7]Anne Hartebrodt, Richard Röttger, David B. Blumenthal:
Federated singular value decomposition for high dimensional data. CoRR abs/2205.12109 (2022) - [i6]Eduardo Pérez-Pellitero, Sibi Catley-Chandar, Richard Shaw, Ales Leonardis, Radu Timofte, Zexin Zhang, Cen Liu, Yunbo Peng, Yue Lin, Gaocheng Yu, Jin Zhang, Zhe Ma, Hongbin Wang, Xiangyu Chen, Xintao Wang, Haiwei Wu, Lin Liu, Chao Dong, Jiantao Zhou, Qingsen Yan, Song Zhang, Weiye Chen, Yuhang Liu, Zhen Zhang, Yanning Zhang, Javen Qinfeng Shi, Dong Gong, Dan Zhu, Mengdi Sun, Guannan Chen, Yang Hu, Haowei Li, Baozhu Zou, Zhen Liu, Wenjie Lin, Ting Jiang, Chengzhi Jiang, Xinpeng Li, Mingyan Han, Haoqiang Fan, Jian Sun, Shuaicheng Liu, Juan Marín-Vega, Michael Sloth, Peter Schneider-Kamp, Richard Röttger, Chunyang Li, Long Bao, Gang He, Ziyao Xu, Li Xu, Gen Zhan, Ming Sun, Xing Wen, Junlin Li, Jinjing Li, Chenghua Li, Ruipeng Gang, Fangya Li, Chenming Liu, Shuang Feng, Fei Lei, Rui Liu, Junxiang Ruan, Tianhong Dai, Wei Li, Zhan Lu, Hengyan Liu, Peian Huang, Guangyu Ren, Yonglin Luo, Chang Liu, Qiang Tu, Sai Ma, Yizhen Cao, Steven Tel, Barthelemy Heyrman, Dominique Ginhac, Chul Lee, Gahyeon Kim, Seonghyun Park, An Gia Vien, Truong Thanh Nhat Mai, Howoon Yoon, Tu Vo, Alexander Holston, Sheir Zaheer, Chan Y. Park:
NTIRE 2022 Challenge on High Dynamic Range Imaging: Methods and Results. CoRR abs/2205.12633 (2022) - [i5]Juan Marín-Vega, Michael Sloth, Peter Schneider-Kamp, Richard Röttger:
DRHDR: A Dual branch Residual Network for Multi-Bracket High Dynamic Range Imaging. CoRR abs/2206.04124 (2022) - [i4]Anne Hartebrodt, Richard Röttger:
Privacy of federated QR decomposition using additive secure multiparty computation. CoRR abs/2210.06163 (2022) - [i3]Marcos V. Conde, Radu Timofte, Yibin Huang, Jingyang Peng, Chang Chen, Cheng Li, Eduardo Pérez-Pellitero, Fenglong Song, Furui Bai, Shuai Liu, Chaoyu Feng, Xiaotao Wang, Lei Lei, Yu Zhu, Chenghua Li, Yingying Jiang, Yong A, Peisong Wang, Cong Leng, Jian Cheng, Xiaoyu Liu, Zhicun Yin, Zhilu Zhang, Junyi Li, Ming Liu, Wangmeng Zuo, Jun Jiang, Jinha Kim, Yue Zhang, Beiji Zou, Zhikai Zong, Xiaoxiao Liu, Juan Marín-Vega, Michael Sloth, Peter Schneider-Kamp, Richard Röttger, Furkan Kinli, Baris Özcan, Furkan Kiraç, Li Leyi, S. M. Nadim Uddin, Dipon Kumar Ghosh, Yong Ju Jung:
Reversed Image Signal Processing and RAW Reconstruction. AIM 2022 Challenge Report. CoRR abs/2210.11153 (2022) - 2021
- [j11]Alexander G. B. Grønning, Mhaned Oubounyt, Kristiyan Kanev, Jesper Lund, Tim Kacprowski, Dietmar Zehn, Richard Röttger, Jan Baumbach:
Enabling single-cell trajectory network enrichment. Nat. Comput. Sci. 1(2): 153-163 (2021) - [c4]Anne Hartebrodt, Reza Nasirigerdeh, David B. Blumenthal, Richard Röttger:
Federated Principal Component Analysis for Genome-Wide Association Studies. ICDM 2021: 1090-1095 - [i2]Julian O. Matschinske, Julian Späth, Reza Nasirigerdeh, Reihaneh Torkzadehmahani, Anne Hartebrodt, Balázs Orbán, Sándor Fejér, Olga I. Zolotareva, Mohammad Bakhtiari, Béla Bihari, Marcus D. Bloice, Nina C. Donner, Walid Fdhila, Tobias Frisch, Anne-Christin Hauschild, Dominik Heider, Andreas Holzinger, Walter Hötzendorfer, Jan Hospes, Tim Kacprowski, Markus Kastelitz, Markus List, Rudolf Mayer, Mónika Moga, Heimo Müller, Anastasia Pustozerova, Richard Röttger, Anna Saranti, Harald H. H. W. Schmidt, Christof Tschohl, Nina Kerstin Wenke, Jan Baumbach:
The FeatureCloud AI Store for Federated Learning in Biomedicine and Beyond. CoRR abs/2105.05734 (2021) - 2020
- [i1]Reihaneh Torkzadehmahani, Reza Nasirigerdeh, David B. Blumenthal, Tim Kacprowski, Markus List, Julian O. Matschinske, Julian Späth, Nina Kerstin Wenke, Béla Bihari, Tobias Frisch, Anne Hartebrodt, Anne-Christin Hauschild, Dominik Heider, Andreas Holzinger, Walter Hötzendorfer, Markus Kastelitz, Rudolf Mayer, Cristian Nogales, Anastasia Pustozerova, Richard Röttger, Harald H. H. W. Schmidt, Ameli Schwalber, Christof Tschohl, Andrea Wohner, Jan Baumbach:
Privacy-preserving Artificial Intelligence Techniques in Biomedicine. CoRR abs/2007.11621 (2020)
2010 – 2019
- 2017
- [j10]Diogo Almeida, Ida Skov, Artur Silva, Fabio Vandin, Qihua Tan, Richard Röttger, Jan Baumbach:
Efficient detection of differentially methylated regions using DiMmeR. Bioinform. 33(4): 549-551 (2017) - [j9]Eudes Barbosa, Richard Röttger, Anne-Christin Hauschild, Siomar de Castro Soares, Sebastian Böcker, Vasco Ariston de Carvalho Azevedo, Jan Baumbach:
LifeStyle-Specific-Islands (LiSSI): Integrated Bioinformatics Platform for Genomic Island Analysis. J. Integr. Bioinform. 14(2) (2017) - [c3]Christian Wiwie, Richard Röttger:
On the power and limits of sequence similarity based clustering of proteins into families. PSB 2017: 39-50 - 2016
- [j8]Edson Luiz Folador, Paulo Vinícius Sanches Daltro de Carvalho, Wanderson Marques Silva, Rafaela Salgado Ferreira, Artur Silva, M. Michael Gromiha, Preetam Ghosh, Debmalya Barh, Vasco Ariston de Carvalho Azevedo, Richard Röttger:
In silico identification of essential proteins in Corynebacterium pseudotuberculosis based on protein-protein interaction networks. BMC Syst. Biol. 10: 103:1-103:9 (2016) - [j7]Richard Röttger:
Clustering of Biological Datasets in the Era of Big Data. J. Integr. Bioinform. 13(1) (2016) - [j6]Diogo Almeida, Ida Skov, Jesper Lund, Afsaneh Mohammadnejad, Artur Silva, Fabio Vandin, Qihua Tan, Jan Baumbach, Richard Röttger:
Jllumina - A comprehensive Java-based API for statistical Illumina Infinium HumanMethylation450 and MethylationEPIC data processing. J. Integr. Bioinform. 13(4) (2016) - 2014
- [b1]Richard Röttger:
Active transitivity clustering of large-scale biomedical datasets. Saarland University, 2014 - [j5]Goksel Misirli, Jennifer Hallinan, Richard Röttger, Jan Baumbach, Anil Wipat:
BacillusRegNet: A transcriptional regulation database and analysis platform for Bacillus species. J. Integr. Bioinform. 11(2) (2014) - [c2]Eudes Barbosa, Richard Röttger, Anne-Christin Hauschild, Vasco Ariston de Carvalho Azevedo, Jan Baumbach:
On the limits of computational functional genomics for bacterial lifestyle prediction. GCB 2014: 79-84 - 2013
- [j4]Richard Röttger, Prabhav Kalaghatgi, Peng Sun, Siomar de Castro Soares, Vasco Ariston de Carvalho Azevedo, Tobias Wittkop, Jan Baumbach:
Density parameter estimation for finding clusters of homologous proteins - tracing actinobacterial pathogenicity lifestyles. Bioinform. 29(2): 215-222 (2013) - 2012
- [j3]Josch Pauling, Richard Röttger, Andreas Tauch, Vasco Ariston de Carvalho Azevedo, Jan Baumbach:
CoryneRegNet 6.0 - Updated database content, new analysis methods and novel features focusing on community demands. Nucleic Acids Res. 40(Database-Issue): 610-614 (2012) - [j2]Richard Röttger, Ulrich Rückert, Jan Taubert, Jan Baumbach:
How Little Do We Actually Know? On the Size of Gene Regulatory Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 9(5): 1293-1300 (2012) - [c1]Richard Röttger, Christoph Kreutzer, Thuy Duong Vu, Tobias Wittkop, Jan Baumbach:
Online Transitivity Clustering of Biological Data with Missing Values. GCB 2012: 57-68 - 2011
- [j1]Tobias Wittkop, Sven Rahmann, Richard Röttger, Sebastian Böcker, Jan Baumbach:
Extension and Robustness of Transitivity Clustering for Protein-Protein Interaction Network Analysis. Internet Math. 7(4): 255-273 (2011)
Coauthor Index
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