ConTra v3: a tool to identify transcription factor binding sites across species, update 2017. - Kreft, Lukasz; Soete, Arne; Hulpiau, Paco; Botzki, Alexander; Saeys, Yvan; Bleser, Pieter J. De (Nucleic Acids Res., 2017)

PhysBinder: improving the prediction of transcription factor binding sites by flexible inclusion of biophysical properties. - Broos, Stefan; Soete, Arne; Hooghe, Bart; Moran, Raymond; Roy, Frans van; Bleser, Pieter J. De (Nucleic Acids Res., 2013)

ConTra v2: a tool to identify transcription factor binding sites across species, update 2011. - Broos, Stefan; Hulpiau, Paco; Galle, Jeroen; Hooghe, Bart; Roy, Frans van; Bleser, Pieter J. De (Nucleic Acids Res., 2011)

ORegAnno: an open-access community-driven resource for regulatory annotation. - Griffith, Obi L.; Montgomery, Stephen B.; Bernier, Bridget; Chu, Bryan; Kasaian, Katayoon; Aerts, Stein; Mahony, Shaun; Sleumer, Monica C.; Bilenky, Mikhail; Haeussler, Maximilian; Griffith, Malachi; Gallo, Steven M.; et al. (Nucleic Acids Res., 2008)

ConTra: a promoter alignment analysis tool for identification of transcription factor binding sites across species. - Hooghe, Bart; Hulpiau, Paco; Roy, Frans van; Bleser, Pieter J. De (Nucleic Acids Res., 2008)

A new generation of JASPAR, the open-access repository for transcription factor binding site profiles. - Vlieghe, Dominique; Sandelin, Albin; Bleser, Pieter J. De; Vleminckx, Kris; Wasserman, Wyeth W.; Roy, Frans van; Lenhard, Boris (Nucleic Acids Res., 2006)