Designing Optimal Experiments to Discriminate Interaction Graph Models. - Thiele, Sven; Heise, Sandra; Hessenkemper, Wiebke; Bongartz, Hannes; Fensky, Melissa; Schaper, Fred; Klamt, Steffen (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

TRaCE+: Ensemble inference of gene regulatory networks from transcriptional expression profiles of gene knock-out experiments. - Ud-Dean, S. M. Minhaz; Heise, Sandra; Klamt, Steffen; Gunawan, Rudiyanto (BMC Bioinform., 2016)

An effective framework for reconstructing gene regulatory networks from genetical genomics data. - Flassig, Robert J.; Heise, Sandra; Sundmacher, Kai; Klamt, Steffen (Bioinform., 2013)

Reconstruction of large-scale regulatory networks based on perturbation graphs and transitive reduction: improved methods and their evaluation. - Pinna, Andrea; Heise, Sandra; Flassig, Robert J.; Fuente, Alberto de la; Klamt, Steffen (BMC Syst. Biol., 2013)