An Ecosystem of Services for FAIR Computational Workflows. - Wilkinson, Sean R.; Gustafsson, Johan; Bacall, Finn; Belhajjame, Khalid; Capella, Salvador; González, José María Fernández; Tande, Jacob Fosso; Gadelha, Luiz; Garijo, Daniel; Grubel, Patricia; Grüning, Björn A.; Khan, Farah Zaib; et al. (CoRR, 2025)

WorkflowHub: a registry for computational workflows. - Gustafsson, Johan; Wilkinson, Sean R.; Bacall, Finn; Pireddu, Luca; Soiland-Reyes, Stian; Leo, Simone; Owen, Stuart; Juty, Nick S.; Fernández, José María; Grüning, Björn A.; Brown, Tom; Ménager, Hervé; et al. (CoRR, 2024)

The EOSC-Life Workflow Collaboratory for the Life Sciences. - Goble, Carole A.; Bacall, Finn; Soiland-Reyes, Stian; Owen, Stuart; Eguinoa, Ignacio; Droesbeke, Bert; Ménager, Hervé; Rodríguez-Navas, Laura; Fernández, José María; Grüning, Björn A.; Leo, Simone; Pireddu, Luca; et al. (2023)

The Specimen Data Refinery: A Canonical Workflow Framework and FAIR Digital Object Approach to Speeding up Digital Mobilisation of Natural History Collections. - Hardisty, Alex R.; Brack, Paul; Goble, Carole A.; Livermore, Laurence; Scott, Ben; Groom, Quentin; Owen, Stuart; Soiland-Reyes, Stian (Data Intell., 2022)

Ten simple rules for making a software tool workflow-ready. - Brack, Paul; Crowther, Peter; Soiland-Reyes, Stian; Owen, Stuart; Lowe, Douglas; Williams, Alan R.; Groom, Quentin; Dillen, Mathias; Coppens, Frederik; Grüning, Björn A.; Eguinoa, Ignacio; Ewels, Philip; et al. (PLoS Comput. Biol., 2022)

FAIRDOMHub: a repository and collaboration environment for sharing systems biology research. - Wolstencroft, Katherine; Krebs, Olga; Snoep, Jacky L.; Stanford, Natalie J.; Bacall, Finn; Golebiewski, Martin; Kuzyakiv, Rostyk; Nguyen, Quyen; Owen, Stuart; Soiland-Reyes, Stian; Straszewski, Jakub; Niekerk, David D. van; et al. (Nucleic Acids Res., 2017)

FAIRDOM approach for semantic interoperability of systems biology data and models. - Krebs, Olga; Wolstencroft, Katy; Stanford, Natalie J.; Morrison, Norman; Golebiewski, Martin; Kuzyakiv, Rostyk; Owen, Stuart; Nguyen, Quyen; Snoep, Jacky L.; Müller, Wolfgang; Goble, Carole A. (2016)

SEEK: a systems biology data and model management platform. - Wolstencroft, Katherine; Owen, Stuart; Krebs, Olga; Nguyen, Quyen; Stanford, Natalie J.; Golebiewski, Martin; Weidemann, Andreas; Bittkowski, Meik; An, Lihua; Shockley, David; Snoep, Jacky L.; Müller, Wolfgang; et al. (BMC Syst. Biol., 2015)

FAIRDOM approach for semantic interoperability of systems biology data and models. - Krebs, Olga; Wolstencroft, Katy; Stanford, Natalie J.; Morrison, Norman; Golebiewski, Martin; Owen, Stuart; Nguyen, Quyen; Snoep, Jacky L.; Müller, Wolfgang; Goble, Carole A. (2015)

Stealthy annotation of experimental biology by spreadsheets. - Wolstencroft, Katherine; Owen, Stuart; Horridge, Matthew; Jupp, Simon; Krebs, Olga; Snoep, Jacky L.; Preez, Franco B. du; Müller, Wolfgang; Stevens, Robert; Goble, Carole A. (Concurr. Comput. Pract. Exp., 2013)

Why linked data is not enough for scientists. - Bechhofer, Sean; Buchan, Iain E.; Roure, David De; Missier, Paolo; Ainsworth, John D.; Bhagat, Jiten; Couch, Philip A.; Cruickshank, Don; Delderfield, Mark; Dunlop, Ian; Gamble, Matthew; Michaelides, Danius T.; et al. (Future Gener. Comput. Syst., 2013)

The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud. - Wolstencroft, Katherine; Haines, Robert; Fellows, Donal; Williams, Alan R.; Withers, David; Owen, Stuart; Soiland-Reyes, Stian; Dunlop, Ian; Nenadic, Aleksandra; Fisher, Paul; Bhagat, Jiten; Belhajjame, Khalid; et al. (Nucleic Acids Res., 2013)

Semantic Data and Models Sharing in Systems Biology: The Just Enough Results Model and the SEEK Platform. - Wolstencroft, Katherine; Owen, Stuart; Krebs, Olga; Müller, Wolfgang; Nguyen, Quyen; Snoep, Jacky L.; Goble, Carole A. (2013)

Populous: a tool for building OWL ontologies from templates. - Jupp, Simon; Horridge, Matthew; Iannone, Luigi; Klein, Julie; Owen, Stuart; Schanstra, Joost; Wolstencroft, Katy; Stevens, Robert (BMC Bioinform., 2012)

RightField: Semantic enrichment of Systems Biology data using spreadsheets. - Wolstencroft, Katherine; Owen, Stuart; Goble, Carole A.; Nguyen, Quyen; Krebs, Olga; Müller, Wolfgang (2012)

RightField: Scientific Knowledge Acquisition by Stealth through Ontology-Enabled Spreadsheets. - Wolstencroft, Katy; Owen, Stuart; Horridge, Matthew; Müller, Wolfgang; Bacall, Finn; Snoep, Jacky L.; Preez, Franco B. du; Nguyen, Quyen; Krebs, Olga; Goble, Carole A. (2012)

RightField: embedding ontology annotation in spreadsheets. - Wolstencroft, Katy; Owen, Stuart; Horridge, Matthew; Krebs, Olga; Müller, Wolfgang; Snoep, Jacky L.; Preez, Franco B. du; Goble, Carole A. (Bioinform., 2011)

Populous: A Tool for Populating an Ontology. - Jupp, Simon; Horridge, Matthew; Iannone, Luigi; Klein, Julie; Owen, Stuart; Schanstra, Joost; Wolstencroft, Katy; Stevens, Robert (2011)

The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. - Katayama, Toshiaki; Arakawa, Kazuharu; Nakao, Mitsuteru; Ono, Keiichiro; Aoki-Kinoshita, Kiyoko F.; Yamamoto, Yasunori; Yamaguchi, Atsuko; Kawashima, Shuichi; Chun, Hong-Woo; Aerts, Jan; Aranda, Bruno; Barboza, Lord H.; et al. (J. Biomed. Semant., 2010)

Why Linked Data is Not Enough for Scientists. - Bechhofer, Sean; Ainsworth, John D.; Bhagat, Jiten; Buchan, Iain E.; Couch, Philip A.; Cruickshank, Don; Roure, David De; Delderfield, Mark; Dunlop, Ian; Gamble, Matthew; Goble, Carole A.; Michaelides, Danius T.; et al. (2010)

Rightfield: Embedding Ontology Term Selection into Spreadsheets for the Annotation of Biological Data. - Wolstencroft, Katy; Horridge, Matthew; Owen, Stuart; Müller, Wolfgang; Bacall, Finn; Snoep, Jacky L.; Krebs, Olga; Goble, Carole A. (2010)

Taverna, Reloaded. - Missier, Paolo; Soiland-Reyes, Stian; Owen, Stuart; Tan, Wei; Nenadic, Aleksandra; Dunlop, Ian; Williams, Alan R.; Oinn, Tom; Goble, Carole A. (2010)

Populous: A Tool for Populating Templates for OWL Ontologies. - Jupp, Simon; Horridge, Matthew; Iannone, Luigi; Klein, Julie; Owen, Stuart; Schanstra, Joost; Stevens, Robert; Wolstencroft, Katy (2010)

Populous: A tool for populating ontology templates - Jupp, Simon; Horridge, Matthew; Iannone, Luigi; Klein, Julie; Owen, Stuart; Schanstra, Joost; Stevens, Robert; Wolstencroft, Katy (CoRR, 2010)

Performing statistical analyses on quantitative data in Taverna workflows: An example using R and maxdBrowse to identify differentially-expressed genes from microarray data. - Li, Peter; Castrillo, Juan I.; Velarde, Giles; Wassink, Ingo; Soiland-Reyes, Stian; Owen, Stuart; Withers, David; Oinn, Tom; Pocock, Matthew R.; Goble, Carole A.; Oliver, Stephen G.; Kell, Douglas B. (BMC Bioinform., 2008)