Erratum: On Identifiability of Nonlinear ODE Models and Applications in Viral Dynamics. - Miao, Hongyu; Perelson, Alan S.; Wu, Hulin (SIAM Rev., 2023)

PK-RNN-V E: A deep learning model approach to vancomycin therapeutic drug monitoring using electronic health record data. - Nigo, Masayuki; Tran, Hong Thoai Nga; Xie, Ziqian; Feng, Han; Mao, Bingyu; Rasmy, Laila; Miao, Hongyu; Zhi, Degui (J. Biomed. Informatics, 2022)

Neural Generalized Ordinary Differential Equations with Layer-varying Parameters. - Yu, Duo; Miao, Hongyu; Wu, Hulin (CoRR, 2022)

Mathematical Modeling of Business Reopening When Facing SARS-CoV-2 Pandemic: Protection, Cost, and Risk. - Miao, Hongyu; Gao, Qianmiao; Feng, Han; Zhong, Chengxue; Zhu, Pengwei; Wu, Liang; Swartz, Michael D.; Luo, Xi; DeSantis, Stacia; Lai, Dejian; Bauer, Cici; Pérez, Adriana; et al. (Frontiers Appl. Math. Stat., 2020)

A Robust AUC Maximization Framework With Simultaneous Outlier Detection and Feature Selection for Positive-Unlabeled Classification. - Ren, Ke; Yang, Haichuan; Zhao, Yu; Chen, Wu; Xue, Mingshan; Miao, Hongyu; Huang, Shuai; Liu, Ji (IEEE Trans. Neural Networks Learn. Syst., 2019)

Identifying the dynamic gene regulatory network during latent HIV-1 reactivation using high-dimensional ordinary differential equations. - Song, Jaejoon; Carey, Michelle; Zhu, Hongjian; Miao, Hongyu; Ramírez, Juan Camilo; Wu, Hulin (Int. J. Comput. Biol. Drug Des., 2018)

Leveraging Aging in Place Through Sensor-Enhanced In-Home Monitoring. - Wang, Ju; Wang, Jing; Miao, Hongyu; Marschollek, Michael; Wolf, Klaus-Hendrik; Lynch, Kerry A.; Gong, Yang (2018)

A Robust AUC Maximization Framework with Simultaneous Outlier Detection and Feature Selection for Positive-Unlabeled Classification. - Ren, Ke; Yang, Haichuan; Zhao, Yu; Xue, Mingshan; Miao, Hongyu; Huang, Shuai; Liu, Ji (CoRR, 2018)

A scalable algorithm for structure identification of complex gene regulatory network from temporal expression data. - Gui, Shupeng; Rice, Andrew P.; Chen, Rui; Wu, Liang; Liu, Ji; Miao, Hongyu (BMC Bioinform., 2017)

Parameter identifiability-based optimal observation remedy for biological networks. - Wang, Yulin; Miao, Hongyu (BMC Syst. Biol., 2017)

ChemSAR: an online pipelining platform for molecular SAR modeling. - Dong, Jie; Yao, Zhi-Jiang; Zhu, Min-Feng; Wang, Ning-Ning; Lu, Ben; Chen, Alex F.; Lu, Aiping; Miao, Hongyu; Zeng, Wen-Bin; Cao, Dong-Sheng (J. Cheminformatics, 2017)

Structural identifiability of cyclic graphical models of biological networks with latent variables. - Wang, Yulin; Lu, Na; Miao, Hongyu (BMC Syst. Biol., 2016)

Capillary extraction by detecting polarity in circular profiles. - Lu, Na; Silva, Jharon N.; Gu, Yu; Wu, Hulin; Gelbard, Harris A.; Dewhurst, Stephen; Miao, Hongyu (IET Image Process., 2016)

Structure constrained nonnegative matrix factorization for pattern clustering and classification. - Lu, Na; Miao, Hongyu (Neurocomputing, 2016)

Prediction of protein-RNA interactions using sequence and structure descriptors. - Liu, Zhi-Ping; Miao, Hongyu (Neurocomputing, 2016)

BioTriangle: a web-accessible platform for generating various molecular representations for chemicals, proteins, DNAs/RNAs and their interactions. - Dong, Jie; Yao, Zhi-Jiang; Wen, Ming; Zhu, Min-Feng; Wang, Ning-Ning; Miao, Hongyu; Lu, Aiping; Zeng, Wen-Bin; Cao, Dong-Sheng (J. Cheminformatics, 2016)

Clustering Tree-Structured Data on Manifold. - Lu, Na; Miao, Hongyu (IEEE Trans. Pattern Anal. Mach. Intell., 2016)

RegNetwork: an integrated database of transcriptional and post-transcriptional regulatory networks in human and mouse. - Liu, Zhi-Ping; Wu, Canglin; Miao, Hongyu; Wu, Hulin (Database J. Biol. Databases Curation, 2015)

Structure constrained semi-nonnegative matrix factorization for EEG-based motor imagery classification. - Lu, Na; Li, Tengfei; Pan, Jinjin; Ren, Xiaodong; Feng, Zuren; Miao, Hongyu (Comput. Biol. Medicine, 2015)

ChemDes: an integrated web-based platform for molecular descriptor and fingerprint computation. - Dong, Jie; Cao, Dong-Sheng; Miao, Hongyu; Liu, Shao; Deng, Bai-Chuan; Yun, Yong-Huan; Wang, Ning-Ning; Lu, Aiping; Zeng, Wen-Bin; Chen, Alex F. (J. Cheminformatics, 2015)

Clustering Tree-structured Data on Manifold. - Lu, Na; Miao, Hongyu (CoRR, 2015)

Systematic identification of transcriptional and post-transcriptional regulations in human respiratory epithelial cells during influenza A virus infection. - Liu, Zhi-Ping; Wu, Hulin; Zhu, Jian; Miao, Hongyu (BMC Bioinform., 2014)

Parameter estimation for a type of nonlinear stochastic models observed with error. - Gu, Wei; Wu, Hulin; Miao, Hongyu; Xue, Hongqi (Comput. Stat. Data Anal., 2014)

Directional histogram ratio at random probes: A local thresholding criterion for capillary images. - Lu, Na; Silva, Jharon N.; Gu, Yu; Gerber, Scott; Wu, Hulin; Gelbard, Harris A.; Dewhurst, Stephen; Miao, Hongyu (Pattern Recognit., 2013)

On Identifiability of Nonlinear ODE Models and Applications in Viral Dynamics. - Miao, Hongyu; Xia, Xiaohua; Perelson, Alan S.; Wu, Hulin (SIAM Rev., 2011)

DEDiscover: A Computation and Simulation Tool for HIV Viral Fitness Research. - Wu, Hulin; Miao, Hongyu; Warnes, Gregory R.; Wu, Canglin; LeBlanc, Alain; Dykes, Carrie; Demeter, Lisa M. (2008)