BibTeX records: Christian Blouin

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@article{DBLP:journals/titb/KureshiAB16,
  author       = {Nelofar Kureshi and
                  Syed Sibte Raza Abidi and
                  Christian Blouin},
  title        = {A Predictive Model for Personalized Therapeutic Interventions in Non-small
                  Cell Lung Cancer},
  journal      = {{IEEE} J. Biomed. Health Informatics},
  volume       = {20},
  number       = {1},
  pages        = {424--431},
  year         = {2016},
  url          = {https://doi.org/10.1109/JBHI.2014.2377517},
  doi          = {10.1109/JBHI.2014.2377517},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/titb/KureshiAB16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/peerj-cs/SafatliB15,
  author       = {Alexander Safatli and
                  Christian Blouin},
  title        = {Pylogeny: an open-source Python framework for phylogenetic tree reconstruction
                  and search space heuristics},
  journal      = {PeerJ Comput. Sci.},
  volume       = {1},
  pages        = {e9},
  year         = {2015},
  url          = {https://doi.org/10.7717/peerj-cs.9},
  doi          = {10.7717/PEERJ-CS.9},
  timestamp    = {Wed, 16 Mar 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/peerj-cs/SafatliB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/biostec/SafatliB15,
  author       = {Alexander Safatli and
                  Christian Blouin},
  editor       = {Oscar Pastor and
                  Christine Sinoquet and
                  Ana L. N. Fred and
                  Hugo Gamboa and
                  Dirk Elias},
  title        = {Application of Ant Colony Optimization for Mapping the Combinatorial
                  Phylogenetic Search Space},
  booktitle    = {{BIOINFORMATICS} 2015 - Proceedings of the International Conference
                  on Bioinformatics Models, Methods and Algorithms, Lisbon, Portugal,
                  12-15 January, 2015},
  pages        = {195--200},
  publisher    = {SciTePress},
  year         = {2015},
  timestamp    = {Thu, 21 Jan 2021 13:58:22 +0100},
  biburl       = {https://dblp.org/rec/conf/biostec/SafatliB15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/ci/LiuKB14,
  author       = {Haibin Liu and
                  Vlado Keselj and
                  Christian Blouin},
  title        = {Exploring a Subgraph Matching Approach for Extracting Biological Events
                  from literature},
  journal      = {Comput. Intell.},
  volume       = {30},
  number       = {3},
  pages        = {600--635},
  year         = {2014},
  url          = {https://doi.org/10.1111/coin.12009},
  doi          = {10.1111/COIN.12009},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ci/LiuKB14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/aaaifs/LiuKBV12,
  author       = {Haibin Liu and
                  Vlado Keselj and
                  Christian Blouin and
                  Karin Verspoor},
  title        = {Subgraph Matching-Based Literature Mining for Biomedical Relations
                  and Events},
  booktitle    = {Information Retrieval and Knowledge Discovery in Biomedical Text,
                  Papers from the 2012 {AAAI} Fall Symposium, Arlington, Virginia, USA,
                  November 2-4, 2012},
  series       = {{AAAI} Technical Report},
  volume       = {{FS-12-05}},
  publisher    = {{AAAI}},
  year         = {2012},
  url          = {http://www.aaai.org/ocs/index.php/FSS/FSS12/paper/view/5547},
  timestamp    = {Tue, 08 Mar 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/aaaifs/LiuKBV12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/dke/LiuBK10,
  author       = {Haibin Liu and
                  Christian Blouin and
                  Vlado Keselj},
  title        = {Sentence identification of biological interactions using {PATRICIA}
                  tree generated patterns and genetic algorithm optimized parameters},
  journal      = {Data Knowl. Eng.},
  volume       = {69},
  number       = {1},
  pages        = {137--152},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.datak.2009.09.002},
  doi          = {10.1016/J.DATAK.2009.09.002},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/dke/LiuBK10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jcisd/LangelaanWBR10,
  author       = {David N. Langelaan and
                  Michal Wieczorek and
                  Christian Blouin and
                  Jan K. Rainey},
  title        = {Improved Helix and Kink Characterization in Membrane Proteins Allows
                  Evaluation of Kink Sequence Predictors},
  journal      = {J. Chem. Inf. Model.},
  volume       = {50},
  number       = {12},
  pages        = {2213--2220},
  year         = {2010},
  url          = {https://doi.org/10.1021/ci100324n},
  doi          = {10.1021/CI100324N},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcisd/LangelaanWBR10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/smbm/LiuKB10,
  author       = {Haibin Liu and
                  Vlado Keselj and
                  Christian Blouin},
  editor       = {Nigel Collier and
                  Udo Hahn and
                  Dietrich Rebholz{-}Schuhmann and
                  Fabio Rinaldi and
                  Sampo Pyysalo},
  title        = {Biological event extraction using subgraph matching},
  booktitle    = {Proceedings of the Fourth International Symposium for Semantic Mining
                  in Biomedicine, Cambridge, United Kingdom, October, 2010},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {714},
  publisher    = {CEUR-WS.org},
  year         = {2010},
  url          = {https://ceur-ws.org/Vol-714/ShortPaper03\_Liu.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:16 +0100},
  biburl       = {https://dblp.org/rec/conf/smbm/LiuKB10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/BlouinPLSR09,
  author       = {Christian Blouin and
                  Scott Perry and
                  Allan Lavell and
                  Edward Susko and
                  Andrew J. Roger},
  title        = {Reproducing the manual annotation of multiple sequence alignments
                  using a {SVM} classifier},
  journal      = {Bioinform.},
  volume       = {25},
  number       = {23},
  pages        = {3093--3098},
  year         = {2009},
  url          = {https://doi.org/10.1093/bioinformatics/btp552},
  doi          = {10.1093/BIOINFORMATICS/BTP552},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/BlouinPLSR09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/bionlp/LiuBK09,
  author       = {Haibin Liu and
                  Christian Blouin and
                  Vlado Keselj},
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  John Pestian and
                  Jun'ichi Tsujii and
                  Bonnie L. Webber},
  title        = {Identifying Interaction Sentences from Biological Literature Using
                  Automatically Extracted Patterns},
  booktitle    = {Proceedings of the BioNLP Workshop, BioNLP@HLT-NAACL 2009, Boulder,
                  Colorado, USA, June 4-5, 2009},
  pages        = {133--141},
  publisher    = {Association for Computational Linguistics},
  year         = {2009},
  url          = {https://aclanthology.org/W09-1317/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/LiuBK09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/kdd/KeseljLZBW09,
  author       = {Vlado Keselj and
                  Haibin Liu and
                  Norbert Zeh and
                  Christian Blouin and
                  Chris Whidden},
  editor       = {Christophe Costa Flor{\^{e}}ncio and
                  Fabrizio Costa and
                  Jan Ramon and
                  Joost N. Kok},
  title        = {Finding optimal parameters for edit distance based sequence classification
                  is NP-hard},
  booktitle    = {Proceedings of the {ACM} {SIGKDD} Workshop on Statistical and Relational
                  Learning in Bioinformatics, Paris, France, June 28, 2009},
  pages        = {17--21},
  publisher    = {{ACM}},
  year         = {2009},
  url          = {https://doi.org/10.1145/1562090.1562094},
  doi          = {10.1145/1562090.1562094},
  timestamp    = {Sun, 19 Jan 2025 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/kdd/KeseljLZBW09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcbi/JiangB07,
  author       = {Haiyan Jiang and
                  Christian Blouin},
  title        = {Insertions and the emergence of novel protein structure: a structure-based
                  phylogenetic study of insertions},
  journal      = {{BMC} Bioinform.},
  volume       = {8},
  year         = {2007},
  url          = {https://doi.org/10.1186/1471-2105-8-444},
  doi          = {10.1186/1471-2105-8-444},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/JiangB07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/bionlp/LiuBK07,
  author       = {Haibin Liu and
                  Christian Blouin and
                  Vlado Keselj},
  editor       = {K. Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Carol Friedman and
                  Lynette Hirschman and
                  John Pestian},
  title        = {An Unsupervised Method for Extracting Domain-specific Affixes in Biological
                  Literature},
  booktitle    = {Biological, translational, and clinical language processing, BioNLP@ACL
                  2007, Prague, Czech Republic, June 29, 2007},
  pages        = {33--40},
  publisher    = {Association for Computational Linguistics},
  year         = {2007},
  url          = {https://aclanthology.org/W07-1005/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/LiuBK07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcbi/ButtRB05,
  author       = {Davin Butt and
                  Andrew J. Roger and
                  Christian Blouin},
  title        = {libcov: {A} {C++} bioinformatic library to manipulate protein structures,
                  sequence alignments and phylogeny},
  journal      = {{BMC} Bioinform.},
  volume       = {6},
  pages        = {138},
  year         = {2005},
  url          = {https://doi.org/10.1186/1471-2105-6-138},
  doi          = {10.1186/1471-2105-6-138},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/ButtRB05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/ISCApdcs/BlouinBHR05,
  author       = {Christian Blouin and
                  Davin Butt and
                  Glenn Hickey and
                  Andrew Rau{-}Chaplin},
  editor       = {Michael J. Oudshoorn and
                  Sanguthevar Rajasekaran},
  title        = {Fast Parallel Maximum Likelihood-Based Protein Phylogeny},
  booktitle    = {Proceedings of the {ISCA} 18th International Conference on Parallel
                  and Distributed Computing Systems, September 12-14, 2005 Imperial
                  Palace Hotel, Las Vegas, Nevada, {USA}},
  pages        = {281--287},
  publisher    = {{ISCA}},
  year         = {2005},
  timestamp    = {Mon, 09 Aug 2021 16:35:39 +0200},
  biburl       = {https://dblp.org/rec/conf/ISCApdcs/BlouinBHR05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/csb/ShanMRBS03,
  author       = {Yunfeng Shan and
                  Evangelos E. Milios and
                  Andrew J. Roger and
                  Christian Blouin and
                  Edward Susko},
  title        = {Automatic Recognition of Regions of Intrinsically Poor Multiple Alignment
                  Using Machine Learning},
  booktitle    = {2nd {IEEE} Computer Society Bioinformatics Conference, {CSB} 2003,
                  Stanford, CA, USA, August 11-14, 2003},
  pages        = {482--483},
  publisher    = {{IEEE} Computer Society},
  year         = {2003},
  url          = {https://doi.org/10.1109/CSB.2003.1227381},
  doi          = {10.1109/CSB.2003.1227381},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/ShanMRBS03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

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