Utilizing Sequential Information of General Lab-test Results and Diagnoses History for Differential Diagnosis of Dementia - Yizong Xing; Dhita Putri Pratama; Yuke Wang; Yufan Zhang; Brian E. Chapman (CoRR, 2025)

Utilizing LLMs to Investigate the Disputed Role of Evidence in Electronic Cigarette Health Policy Formation in Australia and the UK - Damian Curran; Brian E. Chapman; Mike Conway (CoRR, 2025)

Advanced Deep Learning Techniques for Automated Segmentation of Type B Aortic Dissections - Hao Xu; Ruth Lim; Brian E. Chapman (CoRR, 2025)

Query pipeline optimization for cancer patient question answering systems - Maolin He; Rena Gao; Mike Conway; Brian E. Chapman (CoRR, 2024)

Analyzing the Spread of Informatics with PubMed - Brian E. Chapman; Wendy W. Chapman; Jeremiah Chapman (MEDINFO 2023 - The Future Is Accessible - Proceedings of the 19th World Congress on Medical and Health Informatics, Sydney, NSW, Australia, 8-12 July 2023, 2023)

Designing an Interprofessional Online Course to Foster Learning Health Systems - Sathana Dushyanthen; Dawn Choo; Meg Perrier; Kathleen Gray; Daniel Capurro; Douglas Pires; Brian E. Chapman; Graeme K. Hart; Kit Huckvale; Wendy W. Chapman; Kayley M. Lyons (MEDINFO 2023 - The Future Is Accessible - Proceedings of the 19th World Congress on Medical and Health Informatics, Sydney, NSW, Australia, 8-12 July 2023, 2023)

A Narrative Review of Sociodemographic Disparities in Relation to PEHR Access - Luke Newbegin; Brian E. Chapman (MEDINFO 2023 - The Future Is Accessible - Proceedings of the 19th World Congress on Medical and Health Informatics, Sydney, NSW, Australia, 8-12 July 2023, 2023)

Patient Access to Health Data: A Review of Philosophic and Healthcare Issues - Andrew Xu; Brian E. Chapman (MEDINFO 2023 - The Future Is Accessible - Proceedings of the 19th World Congress on Medical and Health Informatics, Sydney, NSW, Australia, 8-12 July 2023, 2023)

The International Neuromodulation Registry: An Informatics Framework Supporting Cohort Discovery and Analysis - David M. Hedges; John C. Hegman; Jefferson R. Brown; Jack T. Wilburn; Brian E. Chapman; Christopher R. Butson (Frontiers Neuroinformatics, 2020)

Comparative effectiveness of convolutional neural network (CNN) and recurrent neural network (RNN) architectures for radiology text report classification - Imon Banerjee; Yuan Ling; Matthew C. Chen; Sadid A. Hasan; Curtis P. Langlotz; Nathaniel Moradzadeh; Brian E. Chapman; Timothy Amrhein; David A. Mong; Daniel L. Rubin; Oladimeji Farri; Matthew P. Lungren (Artif. Intell. Medicine, 2019)

Bootstrapping estimates of stability for clusters, observations and model selection - Han Yu; Brian E. Chapman; Arianna Di Florio; Ellen Eischen; David Gotz; Mathews Jacob; Rachael Hageman Blair (Comput. Stat., 2019)

Extracting a stroke phenotype risk factor from Veteran Health Administration clinical reports: an information content analysis - Danielle L. Mowery; Brian E. Chapman; Mike Conway; Brett R. South; Erin Madden; Salomeh Keyhani; Wendy W. Chapman (J. Biomed. Semant., 2016)

Assessing the Feasibility of an Automated Suggestion System for Communicating Critical Findings from Chest Radiology Reports to Referring Physicians - Brian E. Chapman; Danielle L. Mowery; Evan Narasimhan; Neel Patel; Wendy W. Chapman; Marta E. Heilbrun (Proceedings of the 15th Workshop on Biomedical Natural Language Processing, BioNLP@ACL 2016, Berlin, Germany, August 12, 2016, 2016)

Automated Recognition of Organ Sub-components for Segmentation Seeding Using Machine Learning - Mohan K. Manchala; Lynette E. Brown; Brian E. Chapman (Summit on Clinical Research Informatics, CRI 2016, San Francisco, CA, USA, March 21-24, 2016, 2016)

Automated generation of directed graphs from vascular segmentations - Brian E. Chapman; Holly Berty; Stuart L. Schulthies (J. Biomed. Informatics, 2015)

Python as a First Programming Language for Biomedical Scientists - Brian E. Chapman; Jeannie Irwin (Proceedings of the 14th Python in Science Conference 2015 (SciPy 2015), Austin, Texas, July 6 - 12, 2015, 2015)

Cue-based assertion classification for Swedish clinical text - Developing a lexicon for pyConTextSwe - Sumithra Velupillai; Maria Skeppstedt; Maria Kvist; Danielle L. Mowery; Brian E. Chapman; Hercules Dalianis; Wendy W. Chapman (Artif. Intell. Medicine, 2014)

Developing a Knowledge Base for Detecting Carotid Stenosis with pyConText - Danielle L. Mowery; Daniel Franc; Shazia Ashfaq; Eric Cheng; Tania Zamora; Wendy W. Chapman; Brian E. Chapman (AMIA 2014, American Medical Informatics Association Annual Symposium, Washington, DC, USA, November 15-19, 2014, 2014)

Extending the NegEx Lexicon for Multiple Languages - Wendy Webber Chapman; Dieter Hillert; Sumithra Velupillai; Maria Kvist; Maria Skeppstedt; Brian E. Chapman; Mike Conway; Melissa Tharp; Danielle L. Mowery; Louise Deléger (MEDINFO 2013 - Proceedings of the 14th World Congress on Medical and Health Informatics, 20-13 August 2013, Copenhagen, Denmark, 2013)

iDASH: integrating data for analysis, anonymization, and sharing - Lucila Ohno-Machado; Vineet Bafna; Aziz A. Boxwala; Brian E. Chapman; Wendy Webber Chapman; Kamalika Chaudhuri; Michele E. Day; Claudiu Farcas; Nathaniel D. Heintzman; Xiaoqian Jiang; Hyeoneui Kim; Jihoon Kim; et al. (J. Am. Medical Informatics Assoc., 2012)

A Preliminary Approach for Creating a Semi-synthetic Multimodal Clinical Data Set from a Publicly Available Image Repository - Shazia Ashfaq; Amilcare Gentili; Wendy Webber Chapman; Brian E. Chapman (AMIA 2012, American Medical Informatics Association Annual Symposium, Chicago, Illinois, USA, November 3-7, 2012, 2012)

A Semi-Automated Automated Classification of Pulmonary Hypertension based on features of Computed Tomography Pulmonary Angiography images - Holly Berty; Marc Simon; Brian E. Chapman (AMIA 2012, American Medical Informatics Association Annual Symposium, Chicago, Illinois, USA, November 3-7, 2012, 2012)

Automatic Detection of Coronary Vessels Using Mutli-scale Texture Dictionaries - Ali Zifan; Brian E. Chapman (2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012, La Jolla, CA, USA, September 27-28, 2012, 2012)

The Frequency of ConText Lexical Items in Diverse Medical Texts - Brian E. Chapman; Wei Wei; Wendy Webber Chapman (2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012, La Jolla, CA, USA, September 27-28, 2012, 2012)

Annio: A Web-Based Tool for Annotating Medical Images with Ontologies - Brian E. Chapman; Mona Wong; Claudiu Farcas; Patrick Reynolds (2012 IEEE Second International Conference on Healthcare Informatics, Imaging and Systems Biology, HISB 2012, La Jolla, CA, USA, September 27-28, 2012, 2012)

Improving performance of computer-aided detection of pulmonary embolisms by incorporating a new pulmonary vascular-tree segmentation algorithm - Xingwei Wang; XiaoFei Song; Brian E. Chapman; Bin Zheng (Medical Imaging 2012: Computer-Aided Diagnosis, San Diego, California, United States, 4-9 February 2012, 2012)

Document-level classification of CT pulmonary angiography reports based on an extension of the ConText algorithm - Brian E. Chapman; Sean Lee; Hyunseok Peter Kang; Wendy Webber Chapman (J. Biomed. Informatics, 2011)

A Multistage Approach to Improve Performance of Computer-Aided Detection of Pulmonary Embolisms Depicted on CT Images: Preliminary Investigation - Sang-Cheol Park; Brian E. Chapman; Bin Zheng (IEEE Trans. Biomed. Eng., 2011)

Improving CAD performance in pulmonary embolism detection: preliminary investigation - Sang Cheol Park; Brian E. Chapman; Christopher Deible; Sean Lee; Bin Zheng (Medical Imaging 2010: Computer-Aided Diagnosis, San Diego, California, United States, 13-18 February 2010, 2010)

Image segmentation using the student's t-test and the divergence of direction on spherical regions - George D. Stetten; Samantha Horvath; John M. Galeotti; Gaurav Shukla; Bo Wang; Brian E. Chapman (Medical Imaging 2010: Image Processing, San Diego, California, USA, February 14-16, 2010, 2010)

Evaluation of internal carotid artery segmentation by InsightSNAP - Emily L. Spangler; Christopher Brown; John A. Roberts; Brian E. Chapman (Medical Imaging 2007: Image Processing, San Diego, CA, United States, 17-22 February 2007, 2007)

Registration of MR and CT images of the liver: comparison of voxel similarity and surface based registration algorithms - Wen-Chi Christina Lee; Mitchell E. Tublin; Brian E. Chapman (Comput. Methods Programs Biomed., 2005)

3D multi-scale vessel enhancement filtering based on curvature measurements: application to time-of-flight MRA - Brian E. Chapman; Dennis L. Parker (Medical Image Anal., 2005)

Coil Sensitivity Estimation for Optimal SNR Reconstruction and Intensity Inhomogeneity Correction in Phased Array MR Imaging - Prashanthi Vemuri; Eugene G. Kholmovski; Dennis L. Parker; Brian E. Chapman (Information Processing in Medical Imaging, 19th International Conference, IPMI 2005, Glenwood Springs, CO, USA, July 10-15, 2005, Proceedings, 2005)

Registering Liver Pathological Images with Prior In Vivo CT/MRI Data - Huadong Wu; Alyssa M. Krasinskas; Mitchell E. Tublin; Brian E. Chapman (Medical Image Computing and Computer-Assisted Intervention - MICCAI 2005, 8th International Conference, Palm Springs, CA, USA, October 26-29, 2005, Proceedings, Part I, 2005)

Diagnostic fidelity of the Z-buffer segmentation algorithm: preliminary assessment based on intracranial aneurysm detection - Brian E. Chapman; Dennis L. Parker; Janet O. Stapelton; Jay S. Tsuruda; Claudia Mello-Thoms; Bronwin Hamilton; Gregory L. Katzman; Kevin Moore (J. Biomed. Informatics, 2004)

Intracranial vessel segmentation from time-of-flight MRA using pre-processing of the MIP Z-buffer: accuracy of the ZBS algorithm - Brian E. Chapman; Janet O. Stapelton; Dennis L. Parker (Medical Image Anal., 2004)

Identifying Respiratory Findings in Emergency Department Reports for Biosurveillance using MetaMap - Wendy W. Chapman; Marcelo Fiszman; John N. Dowling; Brian E. Chapman; Thomas C. Rindflesch (MEDINFO 2004 - Proceedings of the 11th World Congress on Medical Informatics, San Francisco, California, USA, September 7-11, 2004, 2004)

Numerical simulations of spectral phase and spectral distance behavior as scalar descriptors of multispectral data - Brian E. Chapman; Claudia Mello-Thoms (Medical Imaging 2004: Image Processing, San Diego, California, United States, 14-19 February 2004, 2004)

Research Paper: Creating a Text Classifier to Detect Radiology Reports Describing Mediastinal Findings Associated with Inhalational Anthrax and Other Disorders - Wendy Webber Chapman; Gregory F. Cooper; Paul Hanbury; Brian E. Chapman; Lee H. Harrison; Michael M. Wagner (J. Am. Medical Informatics Assoc., 2003)

Evaluation of quantitative measures of breast tissue density from mammography with truth from MRI data - Xiao Hui Wang; Brian E. Chapman; Cynthia A. Britton; Saraswathi K. Golla; Luisa P. Wallace; Walter F. Good (Medical Imaging 2003: Image Processing, San Diego, California, United States, 15-20 February 2003, 2003)

A simple method for automated lung segmentation in x-ray CT images - Bin Zheng; Joseph Ken Leader; Glenn S. Maitz; Brian E. Chapman; Carl R. Fuhrman; Robert M. Rogers; Frank C. Sciurba; Andrew Perez; Paul Thompson; Walter F. Good; David Gur (Medical Imaging 2003: Image Processing, San Diego, California, United States, 15-20 February 2003, 2003)

Image Misregistration and Lesion Signal-difference-to-noise Ratio Impact on Spectral Distance Images Formed from Multispectral Images - Brian E. Chapman; Claudia Mello-Thoms (AMIA 2002, American Medical Informatics Association Annual Symposium, San Antonio, TX, USA, November 9-13, 2002, 2002)

Visualization of 3D geometric models of the breast created from contrast-enhanced MRI - Joseph Ken Leader; Xiao Hui Wang; Yuan-Hsiang Chang; Brian E. Chapman (Medical Imaging 2002: Visualization, Image-Guided Procedures, and Display, San Diego, California, United States, 23-28 February 2002, 2002)

Automated estimation of breast composition from MR images - Brian E. Chapman; Xiao Hui Wang; Walter F. Good (Medical Imaging 2002: Image Processing, San Diego, California, United States, 23-28 February 2002, 2002)

A Comparison of Classification Algorithms to Automatically Identify Chest X-Ray Reports That Support Pneumonia - Wendy Webber Chapman; Marcelo Fiszman; Brian E. Chapman; Peter J. Haug (J. Biomed. Informatics, 2001)

Digital processing of radiographic images from PACS to publishing - Mark E. Christian; H. Christian Davidson; Richard H. Wiggins III; Grant Berges; George Cannon; Grant W. Jackson; Brian E. Chapman; H. Ric Harnsberger (J. Digit. Imaging, 2001)

Comparison of three multiscale vessel enhancement filters intended for intracranial MRA: initial phantom results - Brian E. Chapman; Dennis L. Parker (Medical Imaging 2001: Image Processing, San Diego, CA, United States, 17-22 February 2001, 2001)

A comparison of two methods of analog-to-digital medical video conversion - Grant Berges; H. Christian Davidson; Brian E. Chapman; George Cannon; Mark E. Christian; David Harnsberger; H. Ric Harnsberger (J. Digit. Imaging, 2000)

Evaluation of Measures of Technical Image Quality for Intracranial Magnetic Resonance Angiography - Brian E. Chapman; K. Craig Goodrich; Andrew L. Alexander; Duane D. Blatter; Dennis L. Parker (Comput. Biomed. Res., 1999)

Computer Simulation of Convection and Diffusion Effects on Velocity Estimations from X-Ray Contrast Density Time Curves - Sui Ping Huan; Brian E. Chapman; Joseph B. Muhlestein; Duane D. Blatter; Dennis L. Parker (Information Processing in Medical Imaging, 15th International Conference, IPMI'97, Poultney, Vermont, USA, June 9-13, 1997, Proceedings, 1997)

Two Alternative Forced Choice Evaluation of Vessel Visibility Increases Due to Zero-filled Interpolation in MR Angiography - Brian E. Chapman; K. Craig Goodrich; Andrew L. Alexander; Duane D. Blatter; Dennis L. Parker (Information Processing in Medical Imaging, 15th International Conference, IPMI'97, Poultney, Vermont, USA, June 9-13, 1997, Proceedings, 1997)