The Generation Challenge Programme comparative plant stress-responsive gene catalogue. - Wanchana, Samart; Thongjuea, Supat; Ulat, Victor Jun M.; Anacleto, Mylah; Mauleon, Ramil; Conte, Matthieu G.; Rouard, Mathieu; Ruiz, Manuel; Krishnamurthy, Nandini; Sjölander, Kimmen; Hintum, Theo J. L. van; Bruskiewich, Richard M. (Nucleic Acids Res., 2008)

Berkeley Phylogenomics Group web servers: resources for structural phylogenomic analysis. - Glanville, Jake Gunn; Kirshner, Dan; Krishnamurthy, Nandini; Sjölander, Kimmen (Nucleic Acids Res., 2007)

Automated Protein Subfamily Identification and Classification. - Brown, Duncan P.; Krishnamurthy, Nandini; Sjölander, Kimmen (PLoS Comput. Biol., 2007)

Subfamily HMMS in Functional Genomics. - Brown, Duncan P.; Krishnamurthy, Nandini; Dale, Joseph M.; Christopher, Wayne; Sjölander, Kimmen (2005)