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BibTeX records: François Radvanyi
@article{DBLP:journals/ploscb/CreuxZRT24, author = {Constance Creux and Farida Zehraoui and Fran{\c{c}}ois Radvanyi and Fariza Tahi}, title = {Comparison and benchmark of deep learning methods for non-coding {RNA} classification}, journal = {PLoS Comput. Biol.}, volume = {20}, number = {9}, pages = {1012446}, year = {2024}, url = {https://doi.org/10.1371/journal.pcbi.1012446}, doi = {10.1371/JOURNAL.PCBI.1012446}, timestamp = {Sat, 30 Nov 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/CreuxZRT24.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/bibe/OmnesABRT23, author = {Lo{\"{\i}}c Omnes and Eric Angel and Pierre Bartet and Fran{\c{c}}ois Radvanyi and Fariza Tahi}, title = {Prediction of Secondary Structure for Long Non-Coding RNAs using a Recursive Cutting Method based on Deep Learning}, booktitle = {23rd {IEEE} International Conference on Bioinformatics and Bioengineering, {BIBE} 2023, Dayton, OH, USA, December 4-6, 2023}, pages = {14--21}, publisher = {{IEEE}}, year = {2023}, url = {https://doi.org/10.1109/BIBE60311.2023.00011}, doi = {10.1109/BIBE60311.2023.00011}, timestamp = {Mon, 03 Mar 2025 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/bibe/OmnesABRT23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jbcb/ChampionCNERB21, author = {Magali Champion and Julien Chiquet and Pierre Neuvial and Mohamed Elati and Fran{\c{c}}ois Radvanyi and Etienne Birmel{\'{e}}}, title = {Identification of deregulation mechanisms specific to cancer subtypes}, journal = {J. Bioinform. Comput. Biol.}, volume = {19}, number = {1}, pages = {2140003:1--2140003:16}, year = {2021}, url = {https://doi.org/10.1142/S0219720021400035}, doi = {10.1142/S0219720021400035}, timestamp = {Sun, 25 Jul 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/jbcb/ChampionCNERB21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/CantiniKRBRZ19, author = {Laura Cantini and Ulykbek Kairov and Aur{\'{e}}lien de Reyni{\`{e}}s and Emmanuel Barillot and Fran{\c{c}}ois Radvanyi and Andrei Yu. Zinovyev}, title = {Assessing reproducibility of matrix factorization methods in independent transcriptomes}, journal = {Bioinform.}, volume = {35}, number = {21}, pages = {4307--4313}, year = {2019}, url = {https://doi.org/10.1093/bioinformatics/btz225}, doi = {10.1093/BIOINFORMATICS/BTZ225}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/CantiniKRBRZ19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/DelatolaLMRRW17, author = {Eleni Ioanna Delatola and Emilie Lebarbier and Tristan Mary{-}Huard and Fran{\c{c}}ois Radvanyi and St{\'{e}}phane Robin and Jennifer Wong}, title = {SegCorr a statistical procedure for the detection of genomic regions of correlated expression}, journal = {{BMC} Bioinform.}, volume = {18}, number = {1}, pages = {333}, year = {2017}, url = {https://doi.org/10.1186/s12859-017-1742-5}, doi = {10.1186/S12859-017-1742-5}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/DelatolaLMRRW17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/NicolleRE15, author = {R{\'{e}}my Nicolle and Fran{\c{c}}ois Radvanyi and Mohamed Elati}, title = {CoRegNet: reconstruction and integrated analysis of co-regulatory networks}, journal = {Bioinform.}, volume = {31}, number = {18}, pages = {3066--3068}, year = {2015}, url = {https://doi.org/10.1093/bioinformatics/btv305}, doi = {10.1093/BIOINFORMATICS/BTV305}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/NicolleRE15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/WinterhalterNLTRE14, author = {Charles Winterhalter and R{\'{e}}my Nicolle and A. Louis and Cuong To and Fran{\c{c}}ois Radvanyi and Mohamed Elati}, title = {Pepper: cytoscape app for protein complex expansion using protein-protein interaction networks}, journal = {Bioinform.}, volume = {30}, number = {23}, pages = {3419--3420}, year = {2014}, url = {https://doi.org/10.1093/bioinformatics/btu517}, doi = {10.1093/BIOINFORMATICS/BTU517}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/WinterhalterNLTRE14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/AshoorHKRBBB13, author = {Haitham Ashoor and Aur{\'{e}}lie H{\'{e}}rault and Aur{\'{e}}lie Kamoun and Fran{\c{c}}ois Radvanyi and Vladimir B. Bajic and Emmanuel Barillot and Valentina Boeva}, title = {HMCan: a method for detecting chromatin modifications in cancer samples using ChIP-seq data}, journal = {Bioinform.}, volume = {29}, number = {23}, pages = {2979--2986}, year = {2013}, url = {https://doi.org/10.1093/bioinformatics/btt524}, doi = {10.1093/BIOINFORMATICS/BTT524}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/AshoorHKRBBB13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/GriecoCBRKT13, author = {Luca Grieco and Laurence Calzone and Isabelle Bernard{-}Pierrot and Fran{\c{c}}ois Radvanyi and Brigitte Kahn{-}Perl{\`{e}}s and Denis Thieffry}, title = {Integrative Modelling of the Influence of {MAPK} Network on Cancer Cell Fate Decision}, journal = {PLoS Comput. Biol.}, volume = {9}, number = {10}, year = {2013}, url = {https://doi.org/10.1371/journal.pcbi.1003286}, doi = {10.1371/JOURNAL.PCBI.1003286}, timestamp = {Mon, 03 Mar 2025 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/GriecoCBRKT13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/icmla/NicolleER12, author = {R{\'{e}}my Nicolle and Mohamed Elati and Fran{\c{c}}ois Radvanyi}, title = {Network Transformation of Gene Expression for Feature Extraction}, booktitle = {11th International Conference on Machine Learning and Applications, ICMLA, Boca Raton, FL, USA, December 12-15, 2012. Volume 1}, pages = {108--113}, publisher = {{IEEE}}, year = {2012}, url = {https://doi.org/10.1109/ICMLA.2012.27}, doi = {10.1109/ICMLA.2012.27}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/icmla/NicolleER12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/BrancotteBBRRB11, author = {Bryan Brancotte and Anne Biton and Isabelle Bernard{-}Pierrot and Fran{\c{c}}ois Radvanyi and Fabien Reyal and Sarah Cohen Boulakia}, title = {Gene List significance at-a-glance with GeneValorization}, journal = {Bioinform.}, volume = {27}, number = {8}, pages = {1187--1189}, year = {2011}, url = {https://doi.org/10.1093/bioinformatics/btr073}, doi = {10.1093/BIOINFORMATICS/BTR073}, timestamp = {Sun, 06 Oct 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/BrancotteBBRRB11.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/ElatiNBBRR07, author = {Mohamed Elati and Pierre Neuvial and Monique Bolotin{-}Fukuhara and Emmanuel Barillot and Fran{\c{c}}ois Radvanyi and C{\'{e}}line Rouveirol}, title = {{LICORN:} learning cooperative regulation networks from gene expression data}, journal = {Bioinform.}, volume = {23}, number = {18}, pages = {2407--2414}, year = {2007}, url = {https://doi.org/10.1093/bioinformatics/btm352}, doi = {10.1093/BIOINFORMATICS/BTM352}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/ElatiNBBRR07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/tsi/ElatiRR07, author = {Mohamed Elati and Fran{\c{c}}ois Radvanyi and C{\'{e}}line Rouveirol}, title = {Fouille de donn{\'{e}}es pour l'extraction de grands r{\'{e}}seaux de r{\'{e}}gulation g{\'{e}}n{\'{e}}tique}, journal = {Tech. Sci. Informatiques}, volume = {26}, number = {1-2}, pages = {173--196}, year = {2007}, url = {https://doi.org/10.3166/tsi.26.173-196}, doi = {10.3166/TSI.26.173-196}, timestamp = {Wed, 24 Jun 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/tsi/ElatiRR07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/RouveirolSHRVBR06, author = {C{\'{e}}line Rouveirol and Nicolas Stransky and Philippe Hup{\'{e}} and Philippe La Rosa and Eric Viara and Emmanuel Barillot and Fran{\c{c}}ois Radvanyi}, title = {Computation of recurrent minimal genomic alterations from array-CGH data}, journal = {Bioinform.}, volume = {22}, number = {7}, pages = {849--856}, year = {2006}, url = {https://doi.org/10.1093/bioinformatics/btl004}, doi = {10.1093/BIOINFORMATICS/BTL004}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/RouveirolSHRVBR06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/RosaVHPLNBLSRMBJRGRSSDARB06, author = {Philippe La Rosa and Eric Viara and Philippe Hup{\'{e}} and Ga{\"{e}}lle Pierron and St{\'{e}}phane Liva and Pierre Neuvial and Isabel Brito and S{\'{e}}verine Lair and Nicolas Servant and Nicolas Robine and Elodie Mani{\'{e}} and Caroline Brennetot and Isabelle Janoueix{-}Lerosey and Virginie Raynal and Nad{\`{e}}ge Gruel and C{\'{e}}line Rouveirol and Nicolas Stransky and Marc{-}Henri Stern and Olivier Delattre and Alain Aurias and Fran{\c{c}}ois Radvanyi and Emmanuel Barillot}, title = {{VAMP:} Visualization and analysis of array-CGH, transcriptome and other molecular profiles}, journal = {Bioinform.}, volume = {22}, number = {17}, pages = {2066--2073}, year = {2006}, url = {https://doi.org/10.1093/bioinformatics/btl359}, doi = {10.1093/BIOINFORMATICS/BTL359}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/RosaVHPLNBLSRMBJRGRSSDARB06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/NeuvialHBLMBRAB06, author = {Pierre Neuvial and Philippe Hup{\'{e}} and Isabel Brito and St{\'{e}}phane Liva and Elodie Mani{\'{e}} and Caroline Brennetot and Fran{\c{c}}ois Radvanyi and Alain Aurias and Emmanuel Barillot}, title = {Spatial normalization of array-CGH data}, journal = {{BMC} Bioinform.}, volume = {7}, pages = {264}, year = {2006}, url = {https://doi.org/10.1186/1471-2105-7-264}, doi = {10.1186/1471-2105-7-264}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/NeuvialHBLMBRAB06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/ElfilaliLVRRB06, author = {Adil Elfilali and S{\'{e}}verine Lair and Catia Verbeke and Philippe La Rosa and Fran{\c{c}}ois Radvanyi and Emmanuel Barillot}, title = {{ITTACA:} a new database for integrated tumor transcriptome array and clinical data analysis}, journal = {Nucleic Acids Res.}, volume = {34}, number = {Database-Issue}, pages = {613--616}, year = {2006}, url = {https://doi.org/10.1093/nar/gkj022}, doi = {10.1093/NAR/GKJ022}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/ElfilaliLVRRB06.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/WillbrandRNTF05, author = {Karen Willbrand and Fran{\c{c}}ois Radvanyi and Jean{-}Pierre Nadal and Jean{-}Paul Thiery and Thomas M. A. Fink}, title = {Identifying genes from up-down properties of microarray expression series}, journal = {Bioinform.}, volume = {21}, number = {20}, pages = {3859--3864}, year = {2005}, url = {https://doi.org/10.1093/bioinformatics/bti549}, doi = {10.1093/BIOINFORMATICS/BTI549}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/WillbrandRNTF05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/f-egc/ElatiRR05, author = {Mohamed Elati and C{\'{e}}line Rouveirol and Fran{\c{c}}ois Radvanyi}, editor = {Suzanne Pinson and Nicole Vincent}, title = {Apprentissage de signatures de facteurs de transcription {\`{a}} partir de donn{\'{e}}es d'expression}, booktitle = {Extraction et gestion des connaissances (EGC'2005), Actes des cinqui{\`{e}}mes journ{\'{e}}es Extraction et Gestion des Connaissances, Paris, France, 18-21 janvier 2005, 2 Volumes}, series = {Revue des Nouvelles Technologies de l'Information}, volume = {{RNTI-E-3}}, pages = {667--672}, publisher = {C{\'{e}}padu{\`{e}}s-{\'{E}}ditions}, year = {2005}, url = {https://editions-rnti.fr/?inprocid=1000416}, timestamp = {Wed, 06 Nov 2024 17:10:35 +0100}, biburl = {https://dblp.org/rec/conf/f-egc/ElatiRR05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/HupeSTRB04, author = {Philippe Hup{\'{e}} and Nicolas Stransky and Jean{-}Paul Thiery and Fran{\c{c}}ois Radvanyi and Emmanuel Barillot}, title = {Analysis of array {CGH} data: from signal ratio to gain and loss of {DNA} regions}, journal = {Bioinform.}, volume = {20}, number = {18}, pages = {3413--3422}, year = {2004}, url = {https://doi.org/10.1093/bioinformatics/bth418}, doi = {10.1093/BIOINFORMATICS/BTH418}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/HupeSTRB04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/dagstuhl/RouveirolR04, author = {C{\'{e}}line Rouveirol and Fran{\c{c}}ois Radvanyi}, editor = {Katharina Morik and Jean{-}Fran{\c{c}}ois Boulicaut and Arno Siebes}, title = {Local Pattern Discovery in Array-CGH Data}, booktitle = {Local Pattern Detection, International Seminar, Dagstuhl Castle, Germany, April 12-16, 2004, Revised Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {3539}, pages = {135--152}, publisher = {Springer}, year = {2004}, url = {https://doi.org/10.1007/11504245\_9}, doi = {10.1007/11504245\_9}, timestamp = {Tue, 14 May 2019 10:00:51 +0200}, biburl = {https://dblp.org/rec/conf/dagstuhl/RouveirolR04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ismb/BoulakiaLSGRBF04, author = {Sarah Cohen Boulakia and S{\'{e}}verine Lair and Nicolas Stransky and St{\'{e}}phane Graziani and Fran{\c{c}}ois Radvanyi and Emmanuel Barillot and Christine Froidevaux}, title = {Selecting biomedical data sources according to user preferences}, booktitle = {Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, Glasgow, UK, July 31-August 4, 2004}, pages = {86--93}, year = {2004}, url = {https://doi.org/10.1093/bioinformatics/bth949}, doi = {10.1093/BIOINFORMATICS/BTH949}, timestamp = {Sat, 19 Oct 2019 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ismb/BoulakiaLSGRBF04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/jcb/BroetRR02, author = {Philippe Bro{\"{e}}t and Sylvia Richardson and Fran{\c{c}}ois Radvanyi}, title = {Bayesian Hierarchical Model for Identifying Changes in Gene Expression from Microarray Experiments}, journal = {J. Comput. Biol.}, volume = {9}, number = {4}, pages = {671--683}, year = {2002}, url = {https://doi.org/10.1089/106652702760277381}, doi = {10.1089/106652702760277381}, timestamp = {Thu, 12 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/jcb/BroetRR02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }

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