RBPmap: a web server for mapping binding sites of RNA-binding proteins. - Paz, Inbal; Kosti, Idit; Ares, Manuel; Cline, Melissa S.; Mandel-Gutfreund, Yael (Nucleic Acids Res., 2014)

Unusual Intron Conservation near Tissue-Regulated Exons Found by Splicing Microarrays. - Sugnet, Charles W.; Srinivasan, Karpagam; Clark, Tyson; O'Brien, Georgeann; Cline, Melissa S.; Wang, Hui; Williams, Alan; Kulp, David; Blume, John; Haussler, David; Ares, Manuel (PLoS Comput. Biol., 2006)

Transcriptome and Genome Conservation of Alternative Splicing Events in Humans and Mice. - Sugnet, Charles W.; Kent, W. James; Ares, Manuel; Haussler, David (2004)

Gene structure-based splice variant deconvolution using a microarry platform. - Wang, Hui; Hubbell, Earl; Hu, Jing-Shan; Mei, Gangwu; Cline, Melissa S.; Lu, Gang; Clark, Tyson; Siani-Rose, Michael A.; Ares, Manuel; Kulp, David; Haussler, David (2003)