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ORCIDAlgorithms for Molecular Biology, Volume 4
Volume 4, 2009
- Raazesh Sainudiin, Thomas L. York
:
Auto-validating von Neumann rejection sampling from small phylogenetic tree spaces. - Zhen Wang, Guohui Ding, Zhong-Hao Yu, Lei Liu, Yixue Li:
CHSMiner: a GUI tool to identify chromosomal homologous segments. - Pierre Peterlongo, Gustavo Akio Tominaga Sacomoto, Alair Pereira do Lago, Nadia Pisanti, Marie-France Sagot:
Lossless filter for multiple repeats with bounded edit distance. - Tor Ivry, Shahar Michal, Assaf Avihoo, Guillermo Sapiro, Danny Barash:
An image processing approach to computing distances between RNA secondary structures dot plots. - Sahely Bhadra, Chiranjib Bhattacharyya, Nagasuma R. Chandra, I. Saira Mian:
A linear programming approach for estimating the structure of a sparse linear genetic network from transcript profiling data. - William B. Langdon, Andrew P. Harrison:
Evolving DNA motifs to predict GeneChip probe performance. - Koji Kadota, Yuji Nakai, Kentaro Shimizu:
Ranking differentially expressed genes from Affymetrix gene expression data: methods with reproducibility, sensitivity, and specificity. - Sara C. Madeira, Arlindo L. Oliveira:
A polynomial time biclustering algorithm for finding approximate expression patterns in gene expression time series. - Dae-Won Kim, Hong-Seog Park:
Review of "Bioinformatics: A Computing Perspective" edited by Shuba Gopal, Anne Haake, Rhys Price Jones and Paul Tymann. - Axel Mosig, Stefan Jäger, Chaofeng Wang, Sumit Kumar Nath, Ilker Ersoy, Kannappan Palaniappan, Su-Shing Chen:
Tracking cells in Life Cell Imaging videos using topological alignments. - Sheron Wen, Chenguang Wang, Arthur Berg, Yao Li, Myron M. Chang, Roger B. Fillingim, Margaret R. Wallace, Roland Staud, Lee Kaplan, Rongling Wu:
Modeling genetic imprinting effects of DNA sequences with multilocus polymorphism data. - László A. Zahoránszky, Gyula Y. Katona, Péter Hári, András Málnási-Csizmadia, Katharina Anna Zweig, Gergely Zahoránszky-Köhalmi:
Breaking the hierarchy - a new cluster selection mechanism for hierarchical clustering methods. 12 - Piero Fariselli, Castrense Savojardo, Pier Luigi Martelli, Rita Casadio:
Grammatical-Restrained Hidden Conditional Random Fields for Bioinformatics applications. 13 - Eric S. Ho, Christopher D. Jakubowski, Samuel I. Gunderson:
iTriplet, a rule-based nucleic acid sequence motif finder. 14 - K. Myriam Kroll, Gerard T. Barkema, Enrico Carlon:
Linear model for fast background subtraction in oligonucleotide microarrays. 15 - Marília D. V. Braga, Christian Gautier, Marie-France Sagot:
An asymmetric approach to preserve common intervals while sorting by reversals. 16
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