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8th AlCoB 2021: Missoula, MT, USA
- Carlos Martín-Vide
, Miguel A. Vega-Rodríguez
, Travis J. Wheeler
:
Algorithms for Computational Biology - 8th International Conference, AlCoB 2021, Missoula, MT, USA, June 7-11, 2021, Proceedings. Lecture Notes in Computer Science 12715, Springer 2021, ISBN 978-3-030-74431-1
Biological Dynamical Systems and Other Biological Processes
- Ernst Althaus
, Andreas Hildebrandt
, Domenico Mosca
:
Learning Molecular Classes from Small Numbers of Positive Examples Using Graph Grammars. 3-15 - Paola Bonizzoni
, Clelia De Felice
, Alessia Petescia
, Yuri Pirola
, Raffaella Rizzi
, Jens Stoye
, Rocco Zaccagnino
, Rosalba Zizza
:
Can We Replace Reads by Numeric Signatures? Lyndon Fingerprints as Representations of Sequencing Reads for Machine Learning. 16-28 - Wenwen Ju, Chenqi Mou
:
Exploiting Variable Sparsity in Computing Equilibria of Biological Dynamical Systems by Triangular Decomposition. 29-41 - Yining Liu
, Sachin Kadyan
, Itsik Pe'er
:
A Recovery Algorithm and Pooling Designs for One-Stage Noisy Group Testing Under the Probabilistic Framework. 42-53
Phylogenetics
- Kaari Landry, Aivee Teodocio, Manuel Lafond, Olivier Tremblay Savard:
Novel Phylogenetic Network Distances Based on Cherry Picking. 57-81 - David Schaller
, Manuela Geiß
, Marc Hellmuth
, Peter F. Stadler
:
Best Match Graphs with Binary Trees. 82-93 - Eleanor Wedell
, Yirong Cai
, Tandy J. Warnow
:
Scalable and Accurate Phylogenetic Placement Using pplacer-XR. 94-105 - James Willson
, Mrinmoy Saha Roddur
, Tandy J. Warnow
:
Comparing Methods for Species Tree Estimation with Gene Duplication and Loss. 106-117
Sequence Alignment and Genome Rearrangement
- Alexsandro Oliveira Alexandrino
, Klairton Lima Brito
, Andre Rodrigues Oliveira
, Ulisses Dias
, Zanoni Dias
:
Reversal Distance on Genomes with Different Gene Content and Intergenic Regions Information. 121-133 - Klairton Lima Brito
, Alexsandro Oliveira Alexandrino
, Andre Rodrigues Oliveira
, Ulisses Dias
, Zanoni Dias
:
Reversals Distance Considering Flexible Intergenic Regions Sizes. 134-145 - Yin Yao, Martin C. Frith:
Improved DNA-versus-Protein Homology Search for Protein Fossils. 146-158 - Paul Zaharias
, Vladimir Smirnov
, Tandy J. Warnow
:
The Maximum Weight Trace Alignment Merging Problem. 159-171
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