default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDErnesto Picardi
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2023
[j24]Claudio Lo Giudice
, Federico Zambelli, Matteo Chiara, Giulio Pavesi, Marco Antonio Tangaro, Ernesto Picardi, Graziano Pesole:
UTRdb 2.0: a comprehensive, expert curated catalog of eukaryotic mRNAs untranslated regions. Nucleic Acids Res. 51(D1): 337-344 (2023)- 2021
- [j23]Matteo Chiara, Anna Maria D'Erchia, Carmela Gissi, Caterina Manzari, Antonio Parisi, Nicoletta Resta, Federico Zambelli, Ernesto Picardi, Giulio Pavesi, David Stephen Horner, Graziano Pesole:
Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities. Briefings Bioinform. 22(2): 616-630 (2021) - [j22]Luigi Mansi, Marco Antonio Tangaro, Claudio Lo Giudice, Tiziano Flati, Eli Kopel, Amos Avraham Schaffer, Tiziana Castrignanò, Giovanni Chillemi, Graziano Pesole, Ernesto Picardi:
REDIportal: millions of novel A-to-I RNA editing events from thousands of RNAseq experiments. Nucleic Acids Res. 49(Database-Issue): D1012-D1019 (2021) - 2020
- [j21]Matteo Chiara, Federico Zambelli, Ernesto Picardi, David Stephen Horner, Graziano Pesole:
Critical assessment of bioinformatics methods for the characterization of pathological repeat expansions with single-molecule sequencing data. Briefings Bioinform. 21(6): 1971-1986 (2020) - [j20]Tiziana Castrignanò, Silvia Gioiosa, Tiziano Flati, Mirko Cestari, Ernesto Picardi, Matteo Chiara, Maddalena Fratelli, Stefano Amente, Marco Cirilli, Marco Antonio Tangaro, Giovanni Chillemi, Graziano Pesole, Federico Zambelli:
ELIXIR-IT HPC@CINECA: high performance computing resources for the bioinformatics community. BMC Bioinform. 21-S(10): 352 (2020) - [j19]Tiziano Flati, Silvia Gioiosa, Nicola Spallanzani, Ilario Tagliaferri, Maria Angela Diroma, Graziano Pesole, Giovanni Chillemi, Ernesto Picardi, Tiziana Castrignanò:
HPC-REDItools: a novel HPC-aware tool for improved large scale RNA-editing analysis. BMC Bioinform. 21-S(10): 353 (2020)
2010 – 2019
- 2019
- [j18]Maria Angela Diroma, Loredana Ciaccia, Graziano Pesole, Ernesto Picardi:
Elucidating the editome: bioinformatics approaches for RNA editing detection. Briefings Bioinform. 20(2): 436-447 (2019) - 2017
- [j17]Ernesto Picardi, Anna Maria D'Erchia, Claudio Lo Giudice, Graziano Pesole:
REDIportal: a comprehensive database of A-to-I RNA editing events in humans. Nucleic Acids Res. 45(Database-Issue): D750-D757 (2017) - 2014
- [j16]Claudia Calabrese, Domenico Simone, Maria Angela Diroma, Mariangela Santorsola, Cristiano Guttà, Giuseppe Gasparre, Ernesto Picardi, Graziano Pesole, Marcella Attimonelli:
MToolBox: a highly automated pipeline for heteroplasmy annotation and prioritization analysis of human mitochondrial variants in high-throughput sequencing. Bioinform. 30(21): 3115-3117 (2014) - [j15]Vitoantonio Bevilacqua, Nicola Pietroleonardo, Ely Ignazio Giannino, Fabio Stroppa, Domenico Simone, Graziano Pesole, Ernesto Picardi:
EasyCluster2: an improved tool for clustering and assembling long transcriptome reads. BMC Bioinform. 15(S-15): S7 (2014) - 2013
- [j14]Ernesto Picardi, Graziano Pesole:
REDItools: high-throughput RNA editing detection made easy. Bioinform. 29(14): 1813-1814 (2013) - [j13]Mattia D'Antonio, Paolo D'Onorio De Meo, Daniele Paoletti, Berardino Elmi, Matteo Pallocca, Nico Sanna, Ernesto Picardi, Graziano Pesole, Tiziana Castrignanò:
WEP: a high-performance analysis pipeline for whole-exome data. BMC Bioinform. 14(S-7): S11 (2013) - [j12]Matteo Giulietti, Francesco Piva, Mattia D'Antonio, Paolo D'Onorio De Meo, Daniele Paoletti, Tiziana Castrignanò, Anna Maria D'Erchia, Ernesto Picardi, Federico Zambelli, Giovanni Principato, Giulio Pavesi, Graziano Pesole:
SpliceAid-F: a database of human splicing factors and their RNA-binding sites. Nucleic Acids Res. 41(Database-Issue): 125-131 (2013) - [c4]Vitoantonio Bevilacqua, Nicola Pietroleonardo, Ely Ignazio Giannino, Fabio Stroppa, Graziano Pesole, Ernesto Picardi:
Clustering and Assembling Large Transcriptome Datasets by EasyCluster2. ICIC (3) 2013: 231-236 - 2012
- [j11]Yuri Pirola, Raffaella Rizzi, Ernesto Picardi, Graziano Pesole, Gianluca Della Vedova, Paola Bonizzoni:
PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a text. BMC Bioinform. 13(S-5): S2 (2012) - 2011
- [j10]Ernesto Picardi, Mattia D'Antonio, Danilo Carrabino, Tiziana Castrignanò, Graziano Pesole:
ExpEdit: a webserver to explore human RNA editing in RNA-Seq experiments. Bioinform. 27(9): 1311-1312 (2011) - [j9]Pier Luigi Martelli, Mattia D'Antonio, Paola Bonizzoni, Tiziana Castrignanò, Anna Maria D'Erchia, Paolo D'Onorio De Meo, Piero Fariselli, Michele Finelli, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, Raffaella Rizzi, Ivan Rossi, Alessio Valletti, Andrea Zauli, Federico Zambelli, Rita Casadio, Graziano Pesole:
ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing. Nucleic Acids Res. 39(Database-Issue): 80-85 (2011) - [c3]Vitoantonio Bevilacqua, Fabio Stroppa, Stefano Saladino, Ernesto Picardi:
A Novel Approach to Clustering and Assembly of Large-Scale Roche 454 Transcriptome Data for Gene Validation and Alternative Splicing Analysis. ICIC (3) 2011: 641-648 - 2010
- [j8]David Stephen Horner, Giulio Pavesi, Tiziana Castrignanò, Paolo D'Onorio De Meo, Sabino Liuni, Michael Sammeth, Ernesto Picardi, Graziano Pesole:
Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing. Briefings Bioinform. 11(2): 181-197 (2010) - [j7]Giorgio Grillo, Antonio Turi, Flavio Licciulli, Flavio Mignone, Sabino Liuni, Sandro Banfi, Vincenzo Alessandro Gennarino, David Stephen Horner, Giulio Pavesi, Ernesto Picardi, Graziano Pesole:
UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs. Nucleic Acids Res. 38(Database-Issue): 75-80 (2010) - [c2]Vitoantonio Bevilacqua, Ernesto Picardi, Graziano Pesole, Daniele Ranieri, Vincenzo Stola, Vito Renò:
New Tools for Expression Alternative Splicing Validation. ICIC (3) 2010: 222-231
2000 – 2009
- 2009
- [j6]Ernesto Picardi, Flavio Mignone, Graziano Pesole:
EasyCluster: a fast and efficient gene-oriented clustering tool for large-scale transcriptome data. BMC Bioinform. 10(S-6) (2009) - [j5]Paola Bonizzoni, Giancarlo Mauri, Graziano Pesole, Ernesto Picardi, Yuri Pirola, Raffaella Rizzi:
Detecting Alternative Gene Structures from Spliced ESTs: A Computational Approach. J. Comput. Biol. 16(1): 43-66 (2009) - 2008
- [j4]Tiziana Castrignanò, Mattia D'Antonio, Anna Anselmo, Danilo Carrabino, A. D'Onorio De Meo, Anna Maria D'Erchia, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, Alberto Riva, Raffaella Rizzi, Paola Bonizzoni, Graziano Pesole:
ASPicDB: A database resource for alternative splicing analysis. Bioinform. 24(10): 1300-1304 (2008) - [j3]Ernesto Picardi, Carla Quagliariello:
Is plant mitochondrial RNA editing a source of phylogenetic incongruence? An answer from in silico and in vivo data sets. BMC Bioinform. 9(S-2) (2008) - [c1]Tyler S. Alioto, Roderic Guigó, Ernesto Picardi, Graziano Pesole:
GenePC and ASPIC Integrate Gene Predictions with Expressed Sequence Alignments To Predict Alternative Transcripts. APBC 2008: 363-372 - 2007
- [j2]Ernesto Picardi, Teresa Maria Rosaria Regina, Axel Brennicke, Carla Quagliariello:
REDIdb: the RNA editing database. Nucleic Acids Res. 35(Database-Issue): 173-177 (2007) - 2006
- [j1]Ernesto Picardi, Carla Quagliariello:
EdiPy: A resource to simulate the evolution of plant mitochondrial genes under the RNA editing. Comput. Biol. Chem. 30(1): 77-80 (2006)
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-08-05 20:24 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
