The PROSITE database, its status in 2002

Nucleic Acids Res. 2002 Jan 1;30(1):235-8. doi: 10.1093/nar/30.1.235.

Abstract

PROSITE [Bairoch and Bucher (1994) Nucleic Acids Res., 22, 3583-3589; Hofmann et al. (1999) Nucleic Acids Res., 27, 215-219] is a method of identifying the functions of uncharacterized proteins translated from genomic or cDNA sequences. The PROSITE database (http://www.expasy.org/prosite/) consists of biologically significant patterns and profiles designed in such a way that with appropriate computational tools it can rapidly and reliably help to determine to which known family of proteins (if any) a new sequence belongs, or which known domain(s) it contains.

MeSH terms

  • Amino Acid Motifs
  • Amino Acid Sequence
  • Animals
  • Database Management Systems
  • Databases, Protein*
  • Forecasting
  • Information Storage and Retrieval
  • Internet
  • Protein Structure, Tertiary
  • Proteins / chemistry
  • Proteins / genetics
  • Proteins / physiology*
  • Sequence Alignment

Substances

  • Proteins