Welcome to the PulseDB PathwayCyc Database. The following databases were constructed using PathwayTools and the specified genome assemblies and annotations. There has been no manual curation of the Cyc Databases.


Cajanus cajan (Asha, v1.0)

Varshney et al. 2012, genome data from NCBI
PathwayTools version 23.0

Cicer arietinum (ICC 4958, v3.0)

Parween et al., 2015, genome data from NIPGR
PathwayTools version 23.5

Cicer arietinum (CDC Frontier, v1.0, RefSeq annotation)

Varshney et al., 2013, NCBI genome record GCF_000331145.1
PathwayTools version 26.0

Cicer arietinum (CDC Frontier, v1.0)

Varshney et al., 2013, NCBI genome record GCA_000331145.1
PathwayTools version 26.0

Cicer reticulatum (PI489777, v2.0)

Gupta et al., 2016, genome data from NIPGR
PathwayTools version 23.5

Lens culinaris (CDC Redberry, v2.0)

Ramsay et al., 2021, genome data from KnowPulse
PathwayTools version 25.0

Lens ervoides (acc. IG 72815, v1.0)

Ramsay et al., 2021, genome data from KnowPulse
PathwayTools version 25.0

Lupinus albus (AMIGA, v1.0)

Hufnagel et al., 2020, genome data from JGI
PathwayTools version 25.0

Lupinus angustifolius (L. Tanjil, v1.0)

Hane et al., 2017, NCBI Genome record GCA_001865875.1
PathwayTools version 23.5

Phaseolus acutifolius (Frijol Bayo, v1)

Moghaddam et al., 2021, genome data from JGI
PathwayTools version 25.0

Phaseolus acutifolius (acc. W6 15578, v2)

Moghaddam et al., 2021, genome data from JGI
PathwayTools version 25.0

Phaseolus lunatus (cv. G27455, v1)

Garcia et al., 2021, genome data from JGI
PathwayTools version 25.0

Phaseolus vulgaris (G19833, v2.1)

Genome sequenced by JGI, genome data from JGI
PathwayTools version 23.0

Pisum sativum (Cameor, v1a)

Kreplak et al. 2019 genome data from URGI
PathwayTools version 23.0

Pisum sativum (Zhongwang 6, v1.0)

Yang et al. 2022 genome data from manuscript link
PathwayTools version 26.0

Vicia faba (Hedin/2, v1.0)

Jayakodi et al. 2023 genome data from Faba Bean Genome Consortium
PathwayTools version 26.0

Vicia faba (Tiffany, v1.0)

Jayakodi et al. 2023 genome data from Faba Bean Genome Consortium
PathwayTools version 26.0

Vicia sativa (cv. Studencia, v1.0)

Xi et al. 2022 genome data from GigaDB
PathwayTools version 26.0

Vigna angularis (Jingnong 6, v1.1)

Yang et al. 2015, genome data from NCBI
PathwayTools version 23.5

Vigna radiata (cv. VC1973A, v1.0)

Kang et al. 2014, genome data from NCBI
PathwayTools version 26.0

Vigna unguiculata L. Walp (IT97K-499-35, v1.1)

Lonardi et al. 2019, genome data from JGI
PathwayTools version 23.0

Vigna unguiculata subsp. sesquipedalis (line A147, v1.0)

Pan et al. 2023, genome data from Huazhong Agricultural University
PathwayTools version 26.0