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Search life-sciences literature (45,103,589 articles, preprints and more)

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Benchmarking whole exome sequencing in the German network for personalized medicine.
Menzel M, Martis-Thiele M, Goldschmid H, Ott A, Romanovsky E, Siemanowski-Hrach J, Seillier L, Brüchle NO, Maurer A, Lehmann KV, Begemann M, Elbracht M, Meyer R, Dintner S, Claus R, Meier-Kolthoff JP, Blanc E, Möbs M, Joosten M, [...] Stenzinger A
Eur J Cancer, 211:114306, 08 Sep 2024
Cited by: 0 articles | PMID: 39293347
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NAB2::STAT6 fusions and genome-wide DNA methylation profiling: Predictors of patient outcomes in meningeal solitary fibrous tumors.
Eschbacher KL, Tran QT, Moskalev EA, Jenkins S, Fritchie K, Stoehr R, Caron A, Link MJ, Brown PD, Guajardo A, Brat DJ, Wu A, Santagata S, Louis DN, Brastianos PK, Kaplan AB, Alexander B, Rossi S, Ferrarese F, [...] Giannini C
Brain Pathol, 34(6):e13256, 24 Mar 2024
Cited by: 1 article | PMID: 38523251 | PMCID: PMC11483515
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Determinants Affecting the Clinical Implementation of a Molecularly Informed Molecular Tumor Board Recommendation: Experience from a Tertiary Cancer Center.
Tögel L, Schubart C, Lettmaier S, Neufert C, Hoyer J, Wolff K, Moskalev EA, Stöhr R, Agaimy A, Reis A, Wullich B, Mackensen A, Pavel M, Beckmann MW, Hartmann A, Fietkau R, Meidenbauer N, Haller F, Spoerl S
Cancers (Basel), 15(24):5892, 18 Dec 2023
Cited by: 1 article | PMID: 38136436 | PMCID: PMC10741918
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Machine Learning-Supported Diagnosis of Small Blue Round Cell Sarcomas Using Targeted RNA Sequencing.
Schlieben LD, Carta MG, Moskalev EA, Stöhr R, Metzler M, Besendörfer M, Meidenbauer N, Semrau S, Janka R, Grützmann R, Wiemann S, Hartmann A, Agaimy A, Haller F, Ferrazzi F
J Mol Diagn, 26(5):387-398, 21 Feb 2024
Cited by: 0 articles | PMID: 38395409
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DNA-methylation signature accurately differentiates pancreatic cancer from chronic pancreatitis in tissue and plasma.
Wu Y, Seufert I, Al-Shaheri FN, Kurilov R, Bauer AS, Manoochehri M, Moskalev EA, Brors B, Tjaden C, Giese NA, Hackert T, Büchler MW, Hoheisel JD
Gut, 72(12):2344-2353, 24 Nov 2023
Cited by: 5 articles | PMID: 37709492 | PMCID: PMC10715533
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Lipomatous Solitary Fibrous Tumors Harbor Rare NAB2-STAT6 Fusion Variants and Show Up-Regulation of the Gene PPARG, Encoding for a Regulator of Adipocyte Differentiation.
Haller F, Schlieben LD, Ferrazzi F, Michal M, Stöhr R, Moskalev EA, Bieg M, Bovée JVMG, Ströbel P, Ishaque N, Grützmann R, Meidenbauer N, Eils R, Wiemann S, Hartmann A, Michal M, Agaimy A
Am J Pathol, 191(7):1314-1324, 20 Apr 2021
Cited by: 4 articles | PMID: 33887215
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BiasCorrector: Fast and accurate correction of all types of experimental biases in quantitative DNA methylation data derived by different technologies.
Kapsner LA, Zavgorodnij MG, Majorova SP, Hotz-Wagenblatt A, Kolychev OV, Lebedev IN, Hoheisel JD, Hartmann A, Bauer A, Mate S, Prokosch HU, Haller F, Moskalev EA
Int J Cancer, 149(5):1150-1165, 26 May 2021
Cited by: 0 articles | PMID: 33997972
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Gene Expression in Solitary Fibrous Tumors (SFTs) Correlates with Anatomic Localization and NAB2-STAT6 Gene Fusion Variants.
Bieg M, Moskalev EA, Will R, Hebele S, Schwarzbach M, Schmeck S, Hohenberger P, Jakob J, Kasper B, Gaiser T, Ströbel P, Wardelmann E, Kontny U, Braunschweig T, Sirbu H, Grützmann R, Meidenbauer N, Ishaque N, Eils R, [...] Haller F
Am J Pathol, 191(4):602-617, 23 Jan 2021
Cited by: 24 articles | PMID: 33497701
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Nuclear NR4A2 (Nurr1) Immunostaining is a Novel Marker for Acinic Cell Carcinoma of the Salivary Glands Lacking the Classic NR4A3 (NOR-1) Upregulation.
Haller F, Moskalev EA, Kuck S, Bieg M, Winkelmann C, Müller SK, Ihrler S, Märkl B, Eils R, Wiemann S, Iro H, Hartmann A, Agaimy A
Am J Surg Pathol, 44(9):1290-1292, 01 Sep 2020
Cited by: 9 articles | PMID: 32341238
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SST gene hypermethylation acts as a pan-cancer marker for pancreatic ductal adenocarcinoma and multiple other tumors: toward its use for blood-based diagnosis.
Manoochehri M, Wu Y, Giese NA, Strobel O, Kutschmann S, Haller F, Hoheisel JD, Moskalev EA, Hackert T, Bauer AS
Mol Oncol, 14(6):1252-1267, 14 Apr 2020
Cited by: 18 articles | PMID: 32243066 | PMCID: PMC7266283
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Distinct genetic alterations and luminal molecular subtype in nested variant of urothelial carcinoma.
Weyerer V, Weisser R, Moskalev EA, Haller F, Stoehr R, Eckstein M, Zinnall U, Gaisa NT, Compérat E, Perren A, Keck B, Allory Y, Kristiansen G, Wullich B, Agaimy A, Hartmann A, Bertz S
Histopathology, 75(6):865-875, 23 Oct 2019
Cited by: 18 articles | PMID: 31348552
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Nuclear NR4A3 Immunostaining Is a Specific and Sensitive Novel Marker for Acinic Cell Carcinoma of the Salivary Glands.
Haller F, Skálová A, Ihrler S, Märkl B, Bieg M, Moskalev EA, Erber R, Blank S, Winkelmann C, Hebele S, Baněčková M, Wiemann S, Müller S, Zenk J, Eils R, Iro H, Hartmann A, Agaimy A
Am J Surg Pathol, 43(9):1264-1272, 01 Sep 2019
Cited by: 34 articles | PMID: 31094928
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The impact of histopathology and NAB2-STAT6 fusion subtype in classification and grading of meningeal solitary fibrous tumor/hemangiopericytoma.
Fritchie K, Jensch K, Moskalev EA, Caron A, Jenkins S, Link M, Brown PD, Rodriguez FJ, Guajardo A, Brat D, Velázquez Vega JE, Perry A, Wu A, Raleigh DR, Santagata S, Louis DN, Brastianos PK, Kaplan A, Alexander BM, [...] Giannini C
Acta Neuropathol, 137(2):307-319, 24 Dec 2018
Cited by: 29 articles | PMID: 30584643 | PMCID: PMC6513906
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Long noncoding RNA HOTAIR is upregulated in an aggressive subgroup of gastrointestinal stromal tumors (GIST) and mediates the establishment of gene-specific DNA methylation patterns.
Bure I, Geer S, Knopf J, Roas M, Henze S, Ströbel P, Agaimy A, Wiemann S, Hoheisel JD, Hartmann A, Haller F, Moskalev EA
Genes Chromosomes Cancer, 57(11):584-597, 24 Sep 2018
Cited by: 11 articles | PMID: 30248209
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Enhancer hijacking activates oncogenic transcription factor NR4A3 in acinic cell carcinomas of the salivary glands.
Haller F, Bieg M, Will R, Körner C, Weichenhan D, Bott A, Ishaque N, Lutsik P, Moskalev EA, Mueller SK, Bähr M, Woerner A, Kaiser B, Scherl C, Haderlein M, Kleinheinz K, Fietkau R, Iro H, Eils R, [...] Agaimy A
Nat Commun, 10(1):368, 21 Jan 2019
Cited by: 72 articles | PMID: 30664630 | PMCID: PMC6341107
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Intraductal Papillary Mucinous Neoplasms of Minor Salivary Glands With AKT1 p.Glu17Lys Mutation.
Agaimy A, Mueller SK, Bumm K, Iro H, Moskalev EA, Hartmann A, Stoehr R, Haller F
Am J Surg Pathol, 42(8):1076-1082, 01 Aug 2018
Cited by: 17 articles | PMID: 29738361
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Low-grade Endometrioid Stromal Sarcoma of the Paratestis: A Novel Report With Molecular Confirmation of JAZF1/SUZ12 Translocation.
Agaimy A, Moskalev EA, Weisser W, Bach T, Haller F, Hartmann A
Am J Surg Pathol, 42(5):695-700, 01 May 2018
Cited by: 6 articles | PMID: 29394168
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The expression of hematopoietic progenitor cell antigen CD34 is regulated by DNA methylation in a site-dependent manner in gastrointestinal stromal tumours.
Bure I, Braun A, Kayser C, Geddert H, Schaefer IM, Cameron S, Ghadimi MB, Ströbel P, Werner M, Hartmann A, Wiemann S, Agaimy A, Haller F, Moskalev EA
Int J Cancer, 141(11):2296-2304, 30 Aug 2017
Cited by: 5 articles | PMID: 28744850
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Epigenetic Regulation of CD133 in Gastrointestinal Stromal Tumors.
Geddert H, Braun A, Kayser C, Dimmler A, Faller G, Agaimy A, Haller F, Moskalev EA
Am J Clin Pathol, 147(5):515-524, 01 May 2017
Cited by: 10 articles | PMID: 28398518
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SMARCA4-deficient pulmonary adenocarcinoma: clinicopathological, immunohistochemical, and molecular characteristics of a novel aggressive neoplasm with a consistent TTF1^neg/CK7^pos/HepPar-1^pos immunophenotype.
Agaimy A, Fuchs F, Moskalev EA, Sirbu H, Hartmann A, Haller F
Virchows Arch, 471(5):599-609, 30 May 2017
Cited by: 46 articles | PMID: 28555282
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Recurrent Somatic PDGFRB Mutations in Sporadic Infantile/Solitary Adult Myofibromas But Not in Angioleiomyomas and Myopericytomas.
Agaimy A, Bieg M, Michal M, Geddert H, Märkl B, Seitz J, Moskalev EA, Schlesner M, Metzler M, Hartmann A, Wiemann S, Michal M, Mentzel T, Haller F
Am J Surg Pathol, 41(2):195-203, 01 Feb 2017
Cited by: 40 articles | PMID: 27776010
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Early Epigenetic Downregulation of microRNA-192 Expression Promotes Pancreatic Cancer Progression.
Botla SK, Savant S, Jandaghi P, Bauer AS, Mücke O, Moskalev EA, Neoptolemos JP, Costello E, Greenhalf W, Scarpa A, Gaida MM, Büchler MW, Strobel O, Hackert T, Giese NA, Augustin HG, Hoheisel JD
Cancer Res, 76(14):4149-4159, 23 May 2016
Cited by: 43 articles | PMID: 27216198
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Inactivating Mutations of RB1 and TP53 Correlate With Sarcomatous Histomorphology and Metastasis/Recurrence in Gastrointestinal Stromal Tumors.
Merten L, Agaimy A, Moskalev EA, Giedl J, Kayser C, Geddert H, Schaefer IM, Cameron S, Werner M, Ströbel P, Hartmann A, Haller F
Am J Clin Pathol, 146(6):718-726, 27 Dec 2016
Cited by: 18 articles | PMID: 28028119
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NAB2-STAT6 Gene Fusion in Meningeal Hemangiopericytoma and Solitary Fibrous Tumor.
Fritchie KJ, Jin L, Rubin BP, Burger PC, Jenkins SM, Barthelmeß S, Moskalev EA, Haller F, Oliveira AM, Giannini C
J Neuropathol Exp Neurol, 75(3):263-271, 16 Feb 2016
Cited by: 34 articles | PMID: 26883114
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Paediatric and adult soft tissue sarcomas with NTRK1 gene fusions: a subset of spindle cell sarcomas unified by a prominent myopericytic/haemangiopericytic pattern.
Haller F, Knopf J, Ackermann A, Bieg M, Kleinheinz K, Schlesner M, Moskalev EA, Will R, Satir AA, Abdelmagid IE, Giedl J, Carbon R, Rompel O, Hartmann A, Wiemann S, Metzler M, Agaimy A
J Pathol, 238(5):700-710, 01 Apr 2016
Cited by: 58 articles | PMID: 26863915
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