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Search life-sciences literature (45,103,589 articles, preprints and more)

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AtDGCR14L contributes to salt-stress tolerance via regulating pre-mRNA splicing in Arabidopsis.
Xie M, Tadesse D, Zhang J, Yao T, Zhang L, Jawdy SS, Devireddy A, Zheng K, Smith EB, Morrell-Falvey J, Pan C, Chen F, Tuskan GA, Muchero W, Chen JG
Plant J, 10 Nov 2024
Cited by: 0 articles | PMID: 39522174
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Providing biological context for GWAS results using eQTL regulatory and co-expression networks in Populus.
Shu M, Yates TB, John C, Harman-Ware AE, Happs RM, Bryant N, Jawdy SS, Ragauskas AJ, Tuskan GA, Muchero W, Chen JG
New Phytol, 244(2):603-617, 21 Aug 2024
Cited by: 0 articles | PMID: 39169686
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Catabolic pathway acquisition by soil pseudomonads readily enables growth with salicyl alcohol but does not affect colonization ofPopulusroots
Christel S, Carrell AA, Burdick LH, Villalobos Solis MI, Abraham PE, Jawdy SS, Chaves JE, Engle NL, Berhane T, Yao T, Chen J, Muchero W, Tschaplinski TJ, Cregger MA, Michener JK
bioRxiv, 18 Jan 2024
Cited by: 0 articles | PPR: PPR789632
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Overexpression of REDUCED WALL ACETYLATION C increases xylan acetylation and biomass recalcitrance in Populus.
Zhang J, Wang X, Wang HT, Qiao Z, Yao T, Xie M, Urbanowicz BR, Zeng W, Jawdy SS, Gunter LE, Yang X, Czarnecki O, Regan S, Seguin A, Rottmann W, Winkeler KA, Sykes R, Lipzen A, Daum C, [...] Chen JG
Plant Physiol, 194(1):243-257, 01 Dec 2023
Cited by: 4 articles | PMID: 37399189 | PMCID: PMC10762510
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom.
Sreedasyam A, Plott C, Hossain MS, Lovell JT, Grimwood J, Jenkins JW, Daum C, Barry K, Carlson J, Shu S, Phillips J, Amirebrahimi M, Zane M, Wang M, Goodstein D, Haas FB, Hiss M, Perroud PF, Jawdy SS, [...] Schmutz J
Nucleic Acids Res, 51(16):8383-8401, 01 Sep 2023
Cited by: 15 articles | PMID: 37526283 | PMCID: PMC10484672
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Expression quantitative trait loci mapping identified PtrXB38 as a key hub gene in adventitious root development in Populus.
Yao T, Zhang J, Yates TB, Shrestha HK, Engle NL, Ployet R, John C, Feng K, Bewg WP, Chen MSS, Lu H, Harding SA, Qiao Z, Jawdy SS, Shu M, Yuan W, Mozaffari K, Harman-Ware AE, Happs RM, [...] Muchero W
New Phytol, 239(6):2248-2264, 24 Jul 2023
Cited by: 0 articles | PMID: 37488708
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The Plasminogen-Apple-Nematode (PAN) domain suppresses JA/ET defense pathways in plants
De K, Pal D, Shanks CM, Yates TB, Feng K, Jawdy SS, Hassan MM, Prabhakar PK, Yang J, Chapla D, Moremen KW, Urbanowicz B, Binder BM, Muchero W
bioRxiv, 18 Jun 2023
Cited by: 0 articles | PPR: PPR677485
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Nitrogen addition alters soil fungal communities, but root fungal communities are resistant to change.
Carrell AA, Hicks BB, Sidelinger E, Johnston ER, Jawdy SS, Clark MM, Klingeman DM, Cregger MA
Front Microbiol, 13:1033631, 25 Jan 2023
Cited by: 1 article | PMID: 36762095 | PMCID: PMC9905728
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JGI Plant Gene Atlas: An updateable transcriptome resource to improve structural annotations and functional gene descriptions across the plant kingdom
Sreedasyam A, Plott C, Hossain MS, Lovell JT, Grimwood J, Jenkins JW, Daum C, Barry K, Carlson J, Shu S, Phillips J, Amirebrahimi M, Zane M, Wang M, Goodstein D, Haas FB, Hiss M, Perroud P, Jawdy SS, [...] Schmutz J
bioRxiv, 03 Oct 2022
Cited by: 0 articles | PPR: PPR553426
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Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe.
Piatkowski BT, Carper DL, Carrell AA, Chen IA, Clum A, Daum C, Eloe-Fadrosh EA, Gilbert D, Granath G, Huntemann M, Jawdy SS, Klarenberg IJ, Kostka JE, Kyrpides NC, Lawrence TJ, Mukherjee S, Nilsson MB, Palaniappan K, Pelletier DA, [...] Weston DJ
Microbiol Resour Announc, 11(10):e0040022, 07 Sep 2022
Cited by: 0 articles | PMID: 36069554 | PMCID: PMC9584203
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Biomass formation and sugar release efficiency of Populus modified by altered expression of a NAC transcription factor.
Payyavula RS, Badmi R, Jawdy SS, Rodriguez M, Gunter L, Sykes RW, Winkeler KA, Collins CM, Rottmann WH, Chen JG, Yang X, Tuskan GA, Kalluri UC
Plant Direct, 6(8):e419, 12 Aug 2022
Cited by: 4 articles | PMID: 35979037 | PMCID: PMC9373907
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Development of an Experimental Approach to Achieve Spatially Resolved Plant Root-Associated Metaproteomics Using an Agar-Plate System.
Appidi MR, Bible AN, Carper DL, Jawdy SS, Giannone RJ, Hettich RL, Morrell-Falvey J, Abraham PE
Mol Plant Microbe Interact, 35(8):639-649, 06 Jul 2022
Cited by: 1 article | PMID: 35349304
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Habitat-adapted microbial communities mediate Sphagnum peatmoss resilience to warming.
Carrell AA, Lawrence TJ, Cabugao KGM, Carper DL, Pelletier DA, Lee JH, Jawdy SS, Grimwood J, Schmutz J, Hanson PJ, Shaw AJ, Weston DJ
New Phytol, 234(6):2111-2125, 28 Mar 2022
Cited by: 7 articles | PMID: 35266150 | PMCID: PMC9310625
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Forest stand and canopy development unaltered by 12 years of CO2 enrichment.
Norby RJ, Warren JM, Iversen CM, Childs J, Jawdy SS, Walker AP
Tree Physiol, 42(3):428-440, 01 Mar 2022
Cited by: 2 articles | PMID: 34387351 | PMCID: PMC8919409
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Novel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism.
Carrell AA, Veličković D, Lawrence TJ, Bowen BP, Louie KB, Carper DL, Chu RK, Mitchell HD, Orr G, Markillie LM, Jawdy SS, Grimwood J, Shaw AJ, Schmutz J, Northen TR, Anderton CR, Pelletier DA, Weston DJ
ISME J, 16(4):1074-1085, 29 Nov 2021
Cited by: 7 articles | PMID: 34845335 | PMCID: PMC8941135
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Temporal dynamics of protein and post-translational modification abundances in Populus leaf across a diurnal period.
Shrestha HK, Solis MIV, Jawdy SS, Tuskan GA, Yang X, Abraham PE
Proteomics, 21(20):e2100127, 16 Sep 2021
Cited by: 0 articles | PMID: 34482644
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Biomass formation and sugar release efficiency ofPopulusmodified by altered expression of a NAC transcription factor
Payyavula RS, Badmi R, Jawdy SS, Rodriguez M, Gunter L, Sykes RW, Winkeler KA, Collins CM, Rottmann WH, Chen J, Yang X, Tuskan GA, Kalluri UC
bioRxiv, 30 Sep 2021
Cited by: 0 articles | PPR: PPR402773
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The Ancient Salicoid Genome Duplication Event: A Platform for Reconstruction of De Novo Gene Evolution in Populus trichocarpa.
Yates TB, Feng K, Zhang J, Singan V, Jawdy SS, Ranjan P, Abraham PE, Barry K, Lipzen A, Pan C, Schmutz J, Chen JG, Tuskan GA, Muchero W
Genome Biol Evol, 13(9):evab198, 01 Sep 2021
Cited by: 4 articles | PMID: 34469536 | PMCID: PMC8445398
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Cultivating the Bacterial Microbiota of Populus Roots.
Carper DL, Weston DJ, Barde A, Timm CM, Lu TY, Burdick LH, Jawdy SS, Klingeman DM, Robeson MS, Veach AM, Cregger MA, Kalluri UC, Schadt CW, Podar M, Doktycz MJ, Pelletier DA
mSystems, 6(3):e0130620, 22 Jun 2021
Cited by: 12 articles | PMID: 34156297 | PMCID: PMC8269261
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Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways.
Henning JA, Weston DJ, Pelletier DA, Timm CM, Jawdy SS, Classen AT
Am J Bot, 106(11):1423-1434, 28 Oct 2019
Cited by: 4 articles | PMID: 31657872
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Identification of functional single nucleotide polymorphism of Populus trichocarpa PtrEPSP-TF and determination of its transcriptional effect.
Xie M, Zhang J, Singan VR, McGranahan MJ, LaFayette PR, Jawdy SS, Engle N, Doeppke C, Tschaplinski TJ, Davis MF, Lindquist E, Barry K, Schmutz J, Parrott WA, Chen F, Tuskan GA, Chen JG, Muchero W
Plant Direct, 4(1):e00178, 03 Jan 2020
Cited by: 3 articles | PMID: 31911959 | PMCID: PMC6941116
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The nature of the progression of drought stress drives differential metabolomic responses in Populus deltoides.
Tschaplinski TJ, Abraham PE, Jawdy SS, Gunter LE, Martin MZ, Engle NL, Yang X, Tuskan GA
Ann Bot, 124(4):617-626, 01 Oct 2019
Cited by: 19 articles | PMID: 30689716 | PMCID: PMC6821281
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PdWND3A, a wood-associated NAC domain-containing protein, affects lignin biosynthesis and composition in Populus.
Yang Y, Yoo CG, Rottmann W, Winkeler KA, Collins CM, Gunter LE, Jawdy SS, Yang X, Pu Y, Ragauskas AJ, Tuskan GA, Chen JG
BMC Plant Biol, 19(1):486, 11 Nov 2019
Cited by: 23 articles | PMID: 31711424 | PMCID: PMC6849256
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Overexpression of a Prefoldin β subunit gene reduces biomass recalcitrance in the bioenergy crop Populus.
Zhang J, Xie M, Li M, Ding J, Pu Y, Bryan AC, Rottmann W, Winkeler KA, Collins CM, Singan V, Lindquist EA, Jawdy SS, Gunter LE, Engle NL, Yang X, Barry K, Tschaplinski TJ, Schmutz J, Tuskan GA, [...] Chen JG
Plant Biotechnol J, 18(3):859-871, 27 Sep 2019
Cited by: 9 articles | PMID: 31498543 | PMCID: PMC7004918
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Mediation of plant-mycorrhizal interaction by a lectin receptor-like kinase.
Labbé J, Muchero W, Czarnecki O, Wang J, Wang X, Bryan AC, Zheng K, Yang Y, Xie M, Zhang J, Wang D, Meidl P, Wang H, Morrell-Falvey JL, Cope KR, Maia LGS, Ané JM, Mewalal R, Jawdy SS, [...] Tuskan GA
Nat Plants, 5(7):676-680, 08 Jul 2019
Cited by: 17 articles | PMID: 31285560
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1-25 of 46 results

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Search life-sciences literature (45,103,589 articles, preprints and more)

Search results

AtDGCR14L contributes to salt-stress tolerance via regulating pre-mRNA splicing in Arabidopsis.

Providing biological context for GWAS results using eQTL regulatory and co-expression networks in Populus.

Catabolic pathway acquisition by soil pseudomonads readily enables growth with salicyl alcohol but does not affect colonization ofPopulusroots

Overexpression of REDUCED WALL ACETYLATION C increases xylan acetylation and biomass recalcitrance in Populus.

JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom.

Expression quantitative trait loci mapping identified PtrXB38 as a key hub gene in adventitious root development in Populus.

The Plasminogen-Apple-Nematode (PAN) domain suppresses JA/ET defense pathways in plants

Nitrogen addition alters soil fungal communities, but root fungal communities are resistant to change.

JGI Plant Gene Atlas: An updateable transcriptome resource to improve structural annotations and functional gene descriptions across the plant kingdom

Draft Metagenome Sequences of the Sphagnum (Peat Moss) Microbiome from Ambient and Warmed Environments across Europe.

Biomass formation and sugar release efficiency of Populus modified by altered expression of a NAC transcription factor.

Development of an Experimental Approach to Achieve Spatially Resolved Plant Root-Associated Metaproteomics Using an Agar-Plate System.

Habitat-adapted microbial communities mediate Sphagnum peatmoss resilience to warming.

Forest stand and canopy development unaltered by 12 years of CO2 enrichment.

Novel metabolic interactions and environmental conditions mediate the boreal peatmoss-cyanobacteria mutualism.

Temporal dynamics of protein and post-translational modification abundances in Populus leaf across a diurnal period.

Biomass formation and sugar release efficiency ofPopulusmodified by altered expression of a NAC transcription factor

The Ancient Salicoid Genome Duplication Event: A Platform for Reconstruction of De Novo Gene Evolution in Populus trichocarpa.

Cultivating the Bacterial Microbiota of Populus Roots.

Relatively rare root endophytic bacteria drive plant resource allocation patterns and tissue nutrient concentration in unpredictable ways.

Identification of functional single nucleotide polymorphism of Populus trichocarpa PtrEPSP-TF and determination of its transcriptional effect.

The nature of the progression of drought stress drives differential metabolomic responses in Populus deltoides.

PdWND3A, a wood-associated NAC domain-containing protein, affects lignin biosynthesis and composition in Populus.

Overexpression of a Prefoldin β subunit gene reduces biomass recalcitrance in the bioenergy crop Populus.

Mediation of plant-mycorrhizal interaction by a lectin receptor-like kinase.

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