For this, use $not along with $in. Let us create a collection with documents −
[
{
id: "101",
subjectid: [
"102"
]
},
{
id: "102",
subjectid: [
"102"
]
}
]Here is the snapshot.

Display all documents from a collection with the help of find() method −
db.collection.find()

This will produce the following output −
[
{
"_id": ObjectId("5a934e000102030405000000"),
"id": "101",
"subjectid": [
"102"
]
},
{
"_id": ObjectId("5a934e000102030405000001"),
"id": "102",
"subjectid": [
"102"
]
}
]Following is the query that uses $expr, $not and $in to fetch values excluding matching field array value −
db.collection.find({
$expr: {
$not:{
$in: [
"$id",
"$subjectid"
]
}
}
})This will produce the following output −
[
{
"_id": ObjectId("5a934e000102030405000000"),
"id": "101",
"subjectid": [
"102"
]
}
]