Systematic gene tagging using CRISPR/Cas9 in human stem cells to illuminate cell organization (Q38621515)

4 September 2017

title

Systematic gene tagging using CRISPR/Cas9 in human stem cells to illuminate cell organization (English)

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4 September 2017

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12

Alan R Horwitz

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4 September 2017

Brock Roberts

1

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4 September 2017

Amanda Haupt

2

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4 September 2017

Andrew Tucker

3

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4 September 2017

Tanya Grancharova

4

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4 September 2017

Joy Arakaki

5

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4 September 2017

Margaret A Fuqua

6

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4 September 2017

Angelique Nelson

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4 September 2017

Caroline Hookway

8

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4 September 2017

Susan A Ludmann

9

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4 September 2017

Irina A Mueller

10

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4 September 2017

Ruian Yang

11

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4 September 2017

Susanne M Rafelski

13

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4 September 2017

Ruwanthi N Gunawardane

14

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4 September 2017

publication date

16 August 2017

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Molecular Biology of the Cell

4 September 2017

published in

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describes a project that uses

4 September 2017

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

PubMed Central

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5638588

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4 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/28814507

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1091/MBC.E17-03-0209

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4 September 2017

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