How the misincorporation of ribonucleotides into genomic DNA can be both harmful and helpful to cells (Q34249529)

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Language	Label	Description	Also known as
English	How the misincorporation of ribonucleotides into genomic DNA can be both harmful and helpful to cells	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

31 July 2017

2 references

2 August 2019

17 September 2019

How the misincorporation of ribonucleotides into genomic DNA can be both harmful and helpful to cells (English)

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

1 reference

2 August 2019

1 reference

17 September 2019

2

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25159610%20AND%20SRC:MED&resulttype=core&format=json

6 June 2020

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Catherine J Potenski

1

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25159610%20AND%20SRC:MED&resulttype=core&format=json

6 June 2020

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publication date

26 August 2014

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Europe PubMed Central

PubMed publication ID

31 July 2017

2 August 2019

17 September 2019

Nucleic Acids Research

3 references

2 August 2019

17 September 2019

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25159610%20AND%20SRC:MED&resulttype=core&format=json

6 June 2020

42

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25159610%20AND%20SRC:MED&resulttype=core&format=json

6 June 2020

16

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Europe PubMed Central

PMC publication ID

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6 June 2020

10226-10234

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Europe PubMed Central

PMC publication ID

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6 June 2020

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Creative Commons Attribution 4.0 International

2 references

Europe PubMed Central

2 August 2019

Europe PubMed Central

17 September 2019

copyright status

0 references

Avoidance of ribonucleotide-induced mutations by RNase H2 and Srs2-Exo1 mechanisms

1 reference

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6 July 2018

Proteolytic Degradation of Topoisomerase II (Top2) Enables the Processing of Top2⋅DNA and Top2⋅RNA Covalent Complexes by Tyrosyl-DNA-Phosphodiesterase 2 (TDP2)

1 reference

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6 July 2018

Nascent chromatin capture proteomics determines chromatin dynamics during DNA replication and identifies unknown fork components

1 reference

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6 July 2018

A saccharomyces cerevisiae RNase H2 interaction network functions to suppress genome instability

1 reference

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6 July 2018

Investigating the mechanisms of ribonucleotide excision repair in Escherichia coli

1 reference

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6 July 2018

Aprataxin resolves adenylated RNA–DNA junctions to maintain genome integrity

1 reference

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6 July 2018

Removal of misincorporated ribonucleotides from prokaryotic genomes: an unexpected role for nucleotide excision repair

1 reference

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6 July 2018

Structure-function analysis of ribonucleotide bypass by B family DNA replicases

1 reference

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6 July 2018

Cost of rNTP/dNTP pool imbalance at the replication fork

1 reference

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6 July 2018

Ribonucleolytic resection is required for repair of strand displaced nonhomologous end-joining intermediates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Ribonucleotides are signals for mismatch repair of leading-strand replication errors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Ribonucleotides misincorporated into DNA act as strand-discrimination signals in eukaryotic mismatch repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Topoisomerase 1-mediated removal of ribonucleotides from nascent leading-strand DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Two distinct mechanisms of Topoisomerase 1-dependent mutagenesis in yeast

1 reference

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6 July 2018

Ribonucleotide incorporation, proofreading and bypass by human DNA polymerase δ

1 reference

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6 July 2018

Human DNA polymerase ε is able to efficiently extend from multiple consecutive ribonucleotides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Mutations in ADAR1 cause Aicardi-Goutières syndrome associated with a type I interferon signature

1 reference

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6 July 2018

RNase H2-initiated ribonucleotide excision repair.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Mammalian RNase H2 removes ribonucleotides from DNA to maintain genome integrity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Enzymatic removal of ribonucleotides from DNA is essential for mammalian genome integrity and development.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Critical amino acids in Escherichia coli UmuC responsible for sugar discrimination and base-substitution fidelity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Solution Structure of the Dickerson DNA Dodecamer Containing a Single Ribonucleotide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

RNase H and postreplication repair protect cells from ribonucleotides incorporated in DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Replication of ribonucleotide-containing DNA templates by yeast replicative polymerases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Mutagenic processing of ribonucleotides in DNA by yeast topoisomerase I

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Identification of a novel type of spacer element required for imprinting in fission yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Mismatch repair-independent tandem repeat sequence instability resulting from ribonucleotide incorporation by DNA polymerase ε.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

PCNA directs type 2 RNase H activity on DNA replication and repair substrates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Unlocking the sugar "steric gate" of DNA polymerases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Genome instability due to ribonucleotide incorporation into DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Abundant ribonucleotide incorporation into DNA by yeast replicative polymerases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

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1 reference

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6 July 2018

A novel mechanism of sugar selection utilized by a human X-family DNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Mutations involved in Aicardi-Goutières syndrome implicate SAMHD1 as regulator of the innate immune response

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Ribonuclease H: the enzymes in eukaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Bacterial nonhomologous end joining ligases preferentially seal breaks with a 3'-OH monoribonucleotide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Clinical and molecular phenotype of Aicardi-Goutieres syndrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Systematic genome instability screens in yeast and their potential relevance to cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Structure and function of a mycobacterial NHEJ DNA repair polymerase

1 reference

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6 July 2018

The Forkhead transcription factor Hcm1 regulates chromosome segregation genes and fills the S-phase gap in the transcriptional circuitry of the cell cycle

1 reference

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6 July 2018

Mutations in genes encoding ribonuclease H2 subunits cause Aicardi-Goutières syndrome and mimic congenital viral brain infection

1 reference

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6 July 2018

Mutations in the gene encoding the 3'-5' DNA exonuclease TREX1 cause Aicardi-Goutières syndrome at the AGS1 locus

1 reference

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6 July 2018

Crystal structures of RNase H bound to an RNA/DNA hybrid: substrate specificity and metal-dependent catalysis

1 reference

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6 July 2018

RNase H2 of Saccharomyces cerevisiae is a complex of three proteins

1 reference

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6 July 2018

A genomewide screen in Saccharomyces cerevisiae for genes that suppress the accumulation of mutations

1 reference

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6 July 2018

Lack of sugar discrimination by human Pol mu requires a single glycine residue

1 reference

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6 July 2018

Polymerase mu is a DNA-directed DNA/RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4176331

6 July 2018

Saccharomyces cerevisiae RNase H(35) functions in RNA primer removal during lagging-strand DNA synthesis, most efficiently in cooperation with Rad27 nuclease

1 reference

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6 July 2018

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1 reference

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6 July 2018

Site-specific ribonuclease activity of eukaryotic DNA topoisomerase I.

1 reference

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6 July 2018

Choosing the right sugar: how polymerases select a nucleotide substrate

1 reference

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6 July 2018

Misincorporation of ribonucleotides by DNA polymerase during in vitro DNA replication.

1 reference

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6 July 2018

A model for topoisomerase I-mediated insertions and deletions with duplex DNA substrates containing branches, nicks, and gaps

1 reference

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6 July 2018

Conformational influence of the ribose 2'-hydroxyl group: Crystal structures of DNA-RNA chimeric duplexes

1 reference

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6 July 2018

A progressive familial encephalopathy in infancy with calcifications of the basal ganglia and chronic cerebrospinal fluid lymphocytosis

1 reference

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6 July 2018

Ribonucleotide-induced helical alteration in DNA prevents nucleosome formation

1 reference

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6 July 2018

Genetic control of intrachromosomal recombination in Saccharomyces cerevisiae. I. Isolation and genetic characterization of hyper-recombination mutations.

1 reference

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6 July 2018

Identification of novel genes involved in gastric carcinogenesis by suppression subtractive hybridization.

1 reference

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28 October 2018

Ribonucleotides and manganese ions improve non-homologous end joining by human Polμ.

1 reference

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28 October 2018

Mispaired rNMPs in DNA are mutagenic and are targets of mismatch repair and RNases H.

1 reference

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28 October 2018

Survival of DNA damage in yeast directly depends on increased dNTP levels allowed by relaxed feedback inhibition of ribonucleotide reductase

1 reference

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28 October 2018

Substrate specificity of human RNase H1 and its role in excision repair of ribose residues misincorporated in DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/25159610

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interferon and Aicardi-Goutières syndrome

1 reference

https://pubmed.ncbi.nlm.nih.gov/25159610

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribonuclease H from K562 human erythroleukemia cells. Purification, characterization, and substrate specificity

1 reference

https://pubmed.ncbi.nlm.nih.gov/25159610

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1093/NAR/GKU773

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25159610%20AND%20SRC:MED&resulttype=core&format=json

6 June 2020

release_tsuso6jklrfd5lf5agndtkeqqm

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https://api.fatcat.wiki/v0/release/tsuso6jklrfd5lf5agndtkeqqm

24 November 2022

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6 June 2020

PubMed publication ID

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Europe PubMed Central

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6 June 2020

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