Repository details

Reactome

Name of repository
Reactome
Additional name(s)
  • a curated pathway database
Repository URL
https://reactome.org/
Subject(s)
Description
Reactome is a manually curated, peer-reviewed pathway database, annotated by expert biologists and cross-referenced to bioinformatics databases. Its aim is to share information in the visual representations of biological pathways in a computationally accessible format. Pathway annotations are authored by expert biologists, in collaboration with Reactome editorial staff and cross-referenced to many bioinformatics databases. These include NCBI Gene, Ensembl and UniProt databases, the UCSC and HapMap Genome Browsers, the KEGG Compound and ChEBI small molecule databases, PubMed, and Gene Ontology.
Contact
Content type(s)
Keyword(s)
Persistent identifier(s) of the repository
  • RRID:nif-0000-03390
  • RRID:SCR_003485
  • OMICS_02771
  • MIR:00000018
  • FAIRsharing_doi:10.25504/FAIRsharing.tf6kj8
Repository type(s)
  • disciplinary
Mission statement for designated community
https://reactome.org/what-is-reactome/
Research data repository language(s)
  • English
Data and/or service provider
  • data provider
Institution name
Cold Spring Harbor Laboratory
Additional name(s)
  • CSHL
Identifier(s)
  • RRID:SCR_008326
  • RRID:nif-0000-24690
  • ROR:02qz8b764
Contact(s)
Country
United States
Type(s) of responsibility
  • general
Type of institution
non-profit
Start date of responsibility
2004
Institution name
European Molecular Biology Laboratory, European Bioinformatics Institute
Additional name(s)
  • EMBL - EBI
Identifier(s)
  • RRID:SCR_004727
  • RRID:nlx_72386
  • ROR:02catss52
Contact(s)
Country
European Union
Type(s) of responsibility
  • general
Type of institution
non-profit
Institution name
NYU School of Medicine, NYU Langone Health
Additional name(s)
  • NYU Langone Health
Identifier(s)
  • ROR:005dvqh91
Contact(s)
Country
United States
Type(s) of responsibility
  • general
Type of institution
non-profit
Institution name
National Institutes of Health, National Human Genome Research Institute
Additional name(s)
  • NIH, NHGRI
Identifier(s)
  • RRID:SCR_011416
  • RRID:nlx_inv_1005098
  • ROR:00baak391
Contact(s)
Country
United States
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution name
Ontario Institute for Cancer Research
Additional name(s)
  • OICR
Identifier(s)
  • RRID:SCR_010609
  • RRID:nlx_51701
  • ROR:043q8yx54
Contact(s)
Country
Canada
Type(s) of responsibility
  • general
Type of institution
non-profit

Policies (1)

Policy Name
Documentation

Database access

Type of access to research data repository
open

Database licenses (1)

Database License
CC0

Data access (1)

Type of access to data
open

Data licenses (1)

DataLicense
CC

Data upload (1)

Type of data upload
closed
Persistent identifier system(s)
  • DOI
Name of the repository software
  • MySQL
Versioning
yes
Data citation guideline
https://reactome.org/cite/
Author identifier system(s)
  • ORCID
Enhanced Publication
no
Quality management
yes

Application programming interfaces (1)

API type
REST

Remarks

Entry date
2014-07-21
Last update
2024-02-13
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Cite this re3data.org record:

re3data.org: Reactome; editing status 2024-02-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TS52 last accessed: 2024-11-10